Scomber scombrus (Atlantic mackerel): 133981412
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Entry
133981412 CDS
T10651
Symbol
cpt1ab
Name
(RefSeq) carnitine O-palmitoyltransferase 1, liver isoform isoform X1
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00071
Fatty acid degradation
ssco01212
Fatty acid metabolism
ssco03320
PPAR signaling pathway
ssco04148
Efferocytosis
ssco04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
133981412 (cpt1ab)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133981412 (cpt1ab)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
133981412 (cpt1ab)
03320 PPAR signaling pathway
133981412 (cpt1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ssco03029
]
133981412 (cpt1ab)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
133981412 (cpt1ab)
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
133981412 (cpt1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
Motif
Other DBs
NCBI-GeneID:
133981412
NCBI-ProteinID:
XP_062276062
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Position
6:complement(12031445..12049444)
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AA seq
772 aa
AA seq
DB search
MAEAHQAAAFQFTVTPDGIDLQLCHEALRQIYLSGLHSWKKRFIRFKNGVMTGVYPGSPT
GFIVVVGSYMSYNKYNQLDPSLGLFTRVGQHIPISQYISTDSQKIVGGVLLGTGLWVTII
MIMRNVLKCLLSWHGWMYARHGSVSWSTRLWMVLVKVFSGRKPMLYSFQNSLPRLPVPSI
KDTCSRHLESVRALMDDDEFEQMKELTIDFEKNLGPRLQWYLKLKSWWTSNYVSDWWEEY
IYLRGRGPIMVNSNYYAMDFLYVHPSSIQAARAGNTIHAIMLYRRKLDRAQVKPIYLLAN
KVPLCSAQWERMFNTTRVPGVETDVLQHVNESKHIAVYHKGRFFKVWMFYDGRLLLPREI
EQQMERILADTSEPMPGEEKLAALTAGERTPWAKGRETYFSRGKNKQALDTIEKAAFFVT
LDDTEQRFDEAHPVKSLDSYAKSLLHGKCYDRWFDKSFNLIVFKNGTMGLNAEHSWADAP
IIGHLWEHVLSMDPFKLGYTESGHCCGEPHPNLPGPQRLQWDITAECQEVIESSLTVARA
LADDVDSHIFPFGDFGKGLIKKCRTSPDAFIQIALQLAHYRDKKKFCLTYEASMTRLFRE
GRTETVRSCTVETCDFVRSMLRDETREERLKLLKLAAEKHQTMYRLAMTGKGIDRHLFCL
YVVSKYLGEDSPFLKKVLSEPWRLSTSQTPLQQVELFDLVKYPEYVSSGGGFGPVADDGY
GVSYIIVGENLINFHISSKHSSPETDSHRFGGNIRQAMLDILGLFQLDNKAK
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagctcaccaggcggcggcctttcaattcaccgtcacccctgatggcatcgac
ctacagctttgccacgaggctctacgccagatctacctctctggcctccactcctggaag
aaaaggttcattcgcttcaagaatggagtaatgactggcgtgtacccaggtagtcctact
gggttcatagtagtggtcgggtcgtacatgtcctacaataaatataaccagctggatcca
tctcttgggttgtttaccagggtgggccaacacatacctatcagccaatatatatccaca
gacagccagaagatagttggaggagtcctgttgggcactggcctgtgggtgaccattatc
atgatcatgaggaatgtcctgaagtgcctgttgtcatggcacggctggatgtacgcacgc
catggctctgtgtcctggtctactcgtttgtggatggtattagtgaaggtcttctctggc
aggaagccaatgctctacagtttccagaattccttgccaaggttacccgtcccctctatc
aaggacacgtgcagtaggcacctggagtcagtccgcgcactgatggatgatgacgaattt
gaacagatgaaggaactgactatagactttgagaagaacctaggacccagactgcagtgg
tacctcaaactcaagtcctggtggacctccaactatgtcagtgactggtgggaggagtat
atctaccttagaggccgtgggcccatcatggtcaacagcaactattatgccatggatttc
ctgtatgtccacccctcatccatccaggctgccagggcaggtaataccattcatgctatc
atgctctacaggaggaaactggacagagcccaggtcaaaccaatatacttgctggcaaac
aaggttcctctgtgttcggctcaatgggagcggatgtttaacaccacccgcgtccctggt
gtggagacagacgtcctgcagcacgtgaacgagagcaaacacatagctgtgtaccataag
ggccgtttcttcaaggtgtggatgttttatgatggacggctgcttttgccccgggagata
gagcagcagatggagaggatcttggctgacacatctgagcccatgccaggagaggagaaa
ctagctgcacttactgcaggggagaggaccccatgggcaaagggccgtgagacctacttc
agccgtggtaagaacaagcaagcactggataccattgagaaggcagccttctttgtaacc
cttgatgacactgagcagcgtttcgatgaagcccacccagtcaagtctctggacagttat
gccaagtcccttctccatggaaagtgctatgacagatggtttgataagtcctttaacctg
atagttttcaagaatggcaccatgggactgaacgctgagcattcctgggccgatgctcca
attattggccatctgtgggagcatgtactttcaatggacccttttaaactgggatacact
gagagtggtcactgctgtggggagccccaccccaacctccctggtccccagaggctgcag
tgggacatcactgctgagtgccaggaggtcattgagagctctctgacagtagccagggct
ctggctgatgatgtggactctcacattttccccttcggcgacttcggcaagggtctgatc
aagaagtgccgcactagtcccgatgcattcattcagattgccctacagctggcccattac
agggataaaaagaagttctgcctgacatacgaagcctccatgacgcgtttgttccgtgag
ggccgaacagaaacagttcgctcctgtaccgtggagacctgtgactttgtccgttccatg
ctcagagatgaaacgagagaagagcgtttgaagttgctcaaattggcagcagaaaagcac
caaaccatgtaccgcctggctatgacagggaagggcatcgatcgccaccttttctgtctt
tatgttgtttccaaatacctcggagaagactcacccttcctcaaaaaggtcctttctgag
ccatggaggctatccaccagtcagactcctctgcagcaggtcgagctgttcgacctggtc
aaatacccagaatatgtgtcctctggaggtggattcggcccagtggctgatgatggttat
ggtgtctcctacatcattgttggtgagaacctcatcaacttccacatctccagcaaacac
tcaagtccagaaactgactcccaccgttttggtggcaacatcagacaggccatgctggat
atacttggtctcttccagctcgacaacaaagccaagtga
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