Scomber scombrus (Atlantic mackerel): 133981415
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Entry
133981415 CDS
T10651
Name
(RefSeq) long-chain fatty acid transport protein 2-like isoform X1
KO
K08746
solute carrier family 27 (fatty acid transporter), member 2 [EC:6.2.1.-
6.2.1.3
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03320
PPAR signaling pathway
ssco04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
133981415
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
133981415
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ssco01004
]
133981415
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssco02000
]
133981415
Enzymes [BR:
ssco01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
133981415
Lipid biosynthesis proteins [BR:
ssco01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
133981415
Transporters [BR:
ssco02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
133981415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
133981415
NCBI-ProteinID:
XP_062276066
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Position
6:23578274..23586428
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AA seq
612 aa
AA seq
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MFLWLIFAAALLGLFFRYPYFFQDVQYVLNKLKVRHRVLTYIKTNYTILDRFVDVVQTQP
HKPFIRFKDETFSYRDADELSNRAARVLLHTGRVKEGDTVALLVWNQPMFLWLWLGLVKL
GCSAAFLNCNIRSRSLLHCFSCSGAKTLVAAEELQDAVEEVLPSLLEQQVTVFILADRCK
AAGVESFKDKMSQVSSEPLPKDLRSHLTLQSPAVYVYTSGTTGLPKAAVITHSKLWAMSF
LQSIAGVTAKDVVYISLPLYHTAGFVGFTAALQMGVTVALRSKFSASQFWDDCRKYNVTV
ILYIGEIMRYLCNTPKKLNDRNHKVRLAMGNGIRPDVWRDFLSRFGNIQIREFYGATEGN
LALMNYSGKIGAIGRDTFFHKRFYPYAVIKYDVDKGEALRDSSGFCIEVAKGGPGLLVSE
ISARAPFSGYARDLQQTEKKRLHDVLKKGDLYFNTGDLVVIDEDDFIYFQDRVGDTFRWK
GENVSTNEVADVITLADCVKEANVYGVEVPDQEGRAGMAAVILRDGQMFDSADVFKHLEN
FLPAYARPRFMRIQSSLDVTSTFKHLKTKLVEEGFDPDKIKDPVYFLDEKEKNYVPLTAD
IFNAVTSGKIKV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgttcctctggttgatatttgcagctgctttgctcggccttttcttccgctatccttac
ttcttccaggatgtccaatacgtgctaaataaactgaaagtaaggcaccgcgttctcacc
tacataaagactaattacaccatcctggaccgttttgtagacgtggtgcagacgcagcca
cacaagccgttcatccgtttcaaagatgagactttttcctaccgagacgcggatgagctc
agtaacagagccgccagagtcctcctgcacaccggacgcgttaaagaaggagacacggtg
gcgctgttggtctggaaccagcccatgttcctgtggctctggttgggtttggtgaagctc
ggatgttccgcagcgtttctcaactgcaacatcaggtccaggtctctgctgcactgcttc
agctgcagcggagcgaagactctggtggctgctgaagagttacaggatgctgtggaggag
gtcctgcccagtctgttggagcagcaggtgacggttttcatcctggctgacagatgcaaa
gctgcaggtgtggagagcttcaaagacaaaatgagccaggtctcctctgagcctctgcca
aaggatttaagatcgcatttaaccctgcagagtccggctgtctatgtgtacacatcaggg
acgacaggtctccccaaagcggcggtgatcactcatagcaaactgtgggccatgtctttt
cttcaatctatagcaggagtgactgccaaagatgtggtttatataagcctccctctttat
cacaccgccggcttcgttggattcaccgcagccctccagatgggtgtcactgttgctttg
aggagtaaattttcagcctctcagttctgggacgactgcagaaaatacaacgtcaccgtc
atactgtacatcggagaaattatgcggtatctctgcaacacaccaaagaaactcaatgat
cgaaaccacaaagtgagactcgcaatgggcaacgggatcagaccggatgtttggagagat
ttcttaagcaggtttggaaacattcaaatcagagagttttacggagcaacagagggaaat
ttagctctgatgaattacagcggcaagattggagccatcggtcgagacacctttttccac
aagaggttttatccctatgctgtgatcaaatatgacgtagacaaaggagaagctctgagg
gattcatctggtttctgcatagaagttgccaaaggtgggcctggacttctggtgtctgaa
atatcagcaagagctccgttcagcggttacgccagagacctgcagcagactgagaagaag
cggctgcatgatgtcttgaagaaaggagacctgtacttcaacaccggcgacctggtggtc
atcgatgaagatgatttcatttactttcaggatcgtgttggagacactttcagatggaaa
ggagagaacgtgtctacgaatgaggtggctgacgtcatcacgctggccgactgcgttaaa
gaagccaatgtgtatggagttgaagtgccagatcaggaggggagggccggaatggctgca
gtcattttaagagacggacagatgtttgactctgcagatgtttttaaacatctagaaaac
ttcctgccggcctacgcaaggccacgattcatgaggattcagagttccttggatgttacg
agcacattcaagcatttgaagacaaagctggttgaggagggcttcgaccccgataaaata
aaggaccctgtctattttctagatgaaaaggaaaagaactacgtcccactcacggcggat
atattcaacgctgttacatcagggaaaattaaagtttaa
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