Scomber scombrus (Atlantic mackerel): 133981420
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Entry
133981420 CDS
T10651
Symbol
sntb2
Name
(RefSeq) beta-2-syntrophin isoform X1
KO
K24064
beta-syntrophin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133981420 (sntb2)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
133981420
NCBI-ProteinID:
XP_062276074
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Position
6:complement(9318618..9347113)
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AA seq
598 aa
AA seq
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MAVWTRADKNGQLDLLLRDRWIRVAAELTRETLTLTAEAEATGQGGNHWDYNNSSAGLRN
GMSNGNDPGPGAGTPGRGPSAGQEQLQNQNQNHGGRGGRSGSPGRGGGSRGQYDGNYGLN
SSGKYPNNGTNSDFGSPGSSYGSPGSSFSSRQGDCPVSLDGSSEAVRKVRVVKQESGGLG
ISIKGGRENRMPILISKIFPGLAADQSRALRVGDAILSVNGNDLREATHDLAVQALKKAG
KEVTLEVKYIREVSPLFKKPSLVADLPWDGVRPQSPSYSGSEDSGSPKHSSSSSSSKDRK
VISLKMCFISRNLTMPDLENRLLELHSPDGQHTVVLRCKDGPTANSWFTAIHTNIAALLP
QTLAHINSYMGASASTHPHLKHIGWLAEQVQLEGGRQQYRPVVMALTEKDILLFESVPWS
RESWSIPLLTHPLLATRLVHSGSARGSPAQGSDLVFATRTGTGRGIESHIFRVETHWDLS
SWTRALVQGAHAAAELIKEVSIGECCTMNRQDVRLTLHYEKGFTVTREPADPAGGAVLFR
YPYEKLKMSADDGIRNLYLDFGGPEGEMVFDLHSGPKPVVFVLHSFLSAKLTRMGLLT
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgtggacccgagcggacaaaaacggtcagctggaccttctcctccgggaccga
tggatccgagtggcggccgagctcacccgagaaacgctgactttaacggccgaggcggag
gcaaccggacaggggggcaaccactgggactacaataactcttcggcaggcctgcggaat
ggcatgtcgaacggaaacgacccgggaccaggtgcggggacccctggccggggtccgtct
gcgggtcaggaacaactacagaaccagaaccagaaccacggggggcggggggggcgcagc
ggaagcccggggcgcggtggtggcagtcggggtcaatacgacggcaactacggtctaaac
agctccggaaagtacccgaataacggcacaaactcagactttggaagccccggctccagc
tacgggagccccgggtccagcttcagctcgagacagggcgactgtccagtcagtctggac
ggctcctcggaggcggtgaggaaggtccgagttgtcaaacaggagtctggcgggctgggg
ataagtatcaagggggggcgcgagaaccggatgcccatcctcatctcaaagatcttcccc
gggctcgccgcggaccagagccgggctctgcgggtgggcgacgcgattctgtcggtgaac
gggaacgacctccgggaggcgacgcacgacctggcggtgcaggcgctaaagaaggcgggc
aaagaagtgacgctggaggtgaagtacatccgcgaggtttccccgctcttcaagaagccg
tccctggtggccgacctgccgtgggatggtgtccgcccacagtcgcccagctacagcggc
agtgaggactccgggtcacccaaacatagcagctcctcctcctcctccaaagacaggaag
gtcatcagcctgaagatgtgcttcatcagcaggaacctcacaatgccagatctggagaac
agactgttggagctccattccccagacggccagcacacagtggtgctgcgttgtaaagat
ggccccactgccaattcctggttcactgccatccacaccaacattgccgccctcctgcca
cagaccctggctcacatcaattcctacatgggggcatcggcttccacgcacccccacctc
aaacacatcgggtggctggctgaacaggtccagctggaaggtggacggcagcagtacagg
cctgtggtcatggcactgacagagaaggacatcctgctatttgaatcggtgccatggagc
agagagtcctggtccatacctctgctcacacatccactgctagccacaaggctcgttcac
tctggtagcgcccgggggtctcctgcccagggttcagacctggtgtttgccactcggaca
ggcacgggccgaggcatcgagtcccacatcttccgtgtggagacccactgggatctgtcg
tcatggacgcgagccctggtgcagggtgcacacgccgccgccgagctcatcaaagaagtc
tccatcggtgagtgctgcacgatgaacagacaagacgttcggctgacgctgcactatgag
aagggcttcactgtgacaagagagccagctgacccagcagggggcgccgtgctgttcaga
tacccctatgagaagctcaaaatgtcagcagatgacggaatacgcaacctttaccttgac
tttgggggtccagagggagaaatggtatttgacctccactcgggtccaaagccggtggtg
ttcgttctccactccttcctgtcagccaagctcacccgtatgggcctgctgacgtga
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