Scomber scombrus (Atlantic mackerel): 133981466
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Entry
133981466 CDS
T10651
Symbol
tbc1d2b
Name
(RefSeq) TBC1 domain family member 2B isoform X1
KO
K20166
TBC1 domain family member 2B
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133981466 (tbc1d2b)
Membrane trafficking [BR:
ssco04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
133981466 (tbc1d2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
PH_8
USP8_interact
Motif
Other DBs
NCBI-GeneID:
133981466
NCBI-ProteinID:
XP_062276141
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All DBs
Position
6:19184193..19198684
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AA seq
972 aa
AA seq
DB search
MHEEEDGSDTNSCTASRIVASRSVDVADTEGAKEQTSKLCGYLNKLSGKGPLRGYKTRWF
VYDPRKCYLYYFKTPQDALPLGHIEIGDACFSYDVEGEEGQFEIRTAGKEFLLKSPSRQV
MHYWLQQLQQKRWEYSNTRGSGQRDSWSSPTLAYPHAGLVGKDNDSFVFEKLSDSMEKVR
SDFAMETETDGGGMVGIQSARGPSAASTNPLNFSLKNIGTELRNSMSYLRQGRGAEGRRS
VFYTGNSSAEEWELVDAPPKDFPEQKHHPDTHRNSFGSSFTFDFVRNPSRPKKPLLRDMI
GTGRFGRSAETRNTESSPVECNGSKPLEMQLRLQTQQEELNRMQQEQTKLREELASQKEL
VRLLQQTLRTSQCDRQPVRRPAPDSSADSDQTQAPVVTQEEVTQLEAHLLDKDEQIQSLC
GHMERLALEKESLQQELKGLKIKVGEINDQLGMLMETIQAKDEVIIKLSQQDPNQSSNPN
DSGSPPAIKEQQELDILKDSLQGYKSQNRFLNKEILELTVLRRNAESREKALEAKYTALE
AKLCQVESKYLVLLQEVKNPVCSSSVQSPASELISRLLEDALQAESPEQQEHLIFKPNTV
SEYDVFGFKTVPEEEEEEEKLIAKVRALELKSLSMTDQEVSVGVKWENFLASTMNRDLVR
SPELKTLLRCGVPHEHRSQVWRWCVSIHVKKFRDNLPPDYYETLLNVAREKPNPASKQIE
LDLLRTLPNNKHYASPSADGIQKLRNVLMAFSWRNPDIGYCQGLNRLVAIALLYLDQEDA
FWSLIAIVEVFMPRDYYTKTLLGSQVDQRVFKDLMSEKLPRLHAHFEQYKVDFSLITFNW
FLVVFVDSVVSDILFKIWDSFLYEGPKIIFRFALALFKYKEEEFLKLQDSTAIFKYLRCF
TRTILDSRKLMNMAFVDMNPFPMRQIQNRRSFHLEKVRLELTELEAIRQTFLRERETSQD
GRTFVSDDEEDN
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaagaggaggatggcagtgacacaaactcctgcacagcgtcccggattgtggcc
tccaggtcggtggacgtggccgacaccgagggcgcgaaggagcagacatccaagctgtgc
ggctacttgaacaaactgtccggcaaagggcctttgagggggtacaagacacggtggttc
gtgtatgacccgagaaaatgttatttgtattacttcaagactccccaagatgccttgcca
ctgggtcacatcgaaataggcgatgcgtgcttcagctacgatgtggaaggagaagagggt
cagtttgagatccgcactgccgggaaagagttcctcctgaagtctcccagcaggcaggtg
atgcattactggctccagcagttgcagcagaaacgatgggaatacagcaacacacgaggc
tccggacagagagacagctggagctccccgaccctggcttaccctcatgctggcctcgta
ggcaaagacaatgattcctttgtctttgaaaagctcagtgatagcatggagaaggtacgc
agcgactttgccatggagacagagacagatggtggaggaatggtggggatccagtcagcc
agagggccttctgctgcgtccacaaaccctctcaacttctccctcaaaaacattggtaca
gaactccggaactccatgtcttatctacggcaaggccgcggagctgagggcaggcgcagt
gtgttttacaccggcaacagcagtgcagaggagtgggagctggtggatgccccgcccaag
gacttccccgaacagaaacatcatccagacacgcacagaaattcctttggatcatcattt
acttttgactttgtgcgcaatccatcgcggcctaaaaagcctttgcttcgagacatgatc
ggcactgggaggtttgggcgcagcgctgagacacgcaacaccgagagctcgccagtcgag
tgcaatggcagcaaacctctggagatgcagcttcgcctccagacccagcaggaagaactg
aaccgcatgcagcaggaacagaccaaactcagagaggagctagccagtcagaaggagctg
gtgagacttctgcagcagactttaagaacctcccagtgtgacaggcagccggtgcggcgt
ccagctccagattcatctgcagactcagaccagacccaggctccagtagtaacccaagaa
gaggtcactcagttggaagcacatctgcttgacaaagatgaacaaatccagtccctctgt
ggccacatggagcgtctcgccttggagaaggagagcttgcaacaagagctaaaggggctg
aaaataaaggtgggggaaattaacgaccagctgggcatgttgatggagaccatccaggcc
aaagatgaagtcatcataaagctttcacagcaggaccccaatcaaagcagcaacccaaat
gactctggttcaccacctgccatcaaagagcagcaggaactggacatcctcaaggacagt
cttcaaggttacaaatctcaaaacagattcctgaacaaagagatcctggagctgacagtg
ttacgcagaaatgcagagagtagagaaaaggctttggaagcaaagtatacggccctggag
gccaagttgtgtcaagtggagagcaagtatctggtcctccttcaagaggtgaagaaccca
gtgtgttcctcctcagtgcagagccctgccagtgaactcatttccagattattggaggat
gcactgcaggcagagagccctgaacagcaagaacaccttatcttcaaaccaaacactgtc
agtgagtatgacgtgtttggcttcaagactgttcctgaggaggaggaagaggaagagaag
cttattgccaaggtgagagccttggagctgaagtctctatccatgacggatcaggaggtg
tctgtcggagtgaagtgggagaactttctggccagcaccatgaacagagacctggtgcgc
tcccctgaactcaaaaccctgcttcgctgcggtgttccccacgagcatcgctcccaggtg
tggcgctggtgtgtctccatccatgtcaagaagttccgggacaacttgccgcccgattat
tatgagaccttactaaacgtggcccgggagaagcccaacccggcctcgaagcagattgag
ctggacttgctgcgtactttgcccaacaacaagcactacgcctcccccagtgcagatggc
atccagaaactcaggaacgtcctcatggctttctcctggaggaatccagacatcggctac
tgccagggactcaacaggctggtagcgattgccttgctttacctagatcaagaggacgca
ttttggagcctcattgccattgtggaggtcttcatgccaagagactattacaccaagaca
ctgcttggctctcaggttgatcagcgcgtgttcaaggacctgatgagcgagaagctacca
cggctccatgcccactttgagcagtacaaggtagacttctccctcatcaccttcaactgg
ttcctggtggtgtttgtggacagcgtggtgagcgacatcctctttaagatctgggattcc
tttctgtacgaaggtccgaagatcatatttcgcttcgctctggctctcttcaagtacaaa
gaagaggagtttttgaagctgcaggactccacagccatcttcaagtatcttcgctgcttc
acacgcacaatcctggattcaaggaagctgatgaacatggcttttgtggacatgaacccc
ttccccatgaggcaaatccagaaccgccgctccttccacctggagaaagtccgtcttgag
ctgactgagctggaggcaatcagacagaccttcctcagggagagggagacatctcaggat
ggacggaccttcgtcagtgatgatgaggaggacaactga
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