Scomber scombrus (Atlantic mackerel): 133981472
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Entry
133981472 CDS
T10651
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
133981472 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133981472
NCBI-ProteinID:
XP_062276155
LinkDB
All DBs
Position
1:complement(10409454..10485303)
Genome browser
AA seq
3036 aa
AA seq
DB search
MDFFDDPNLFVGGLDGLDEEGFPSAPSLVDELNLSADFEPLQVEPLGTGKHQDMIPTVSS
TSAQQAMPTYSHQMDHYIGLKAQNPMGQAFPVQGGTGGGDGGIIAEQHGQYHNATITQVP
QSNGLFCNSSSPMWGNQDQNGNMYHPLSQQQQQLCHQQQQQQQQQQQLHNQQIHVRQQQT
QQQHHPCHQQQQQQHRIRQQMQQQQSHQQQLLNQRQHQQLNTQTMSLQQQQHHNFSFHQG
SQTQSQQQVHHSQQQVPHQLSVGGPRFHSRALPTKTYLDSQNASLSGTCLQQQQQQQQQQ
QQGSYQLNRGGQAFSGSGLEDRNLPFPMHSSSVVHSMPTYSVSSTSNYQPAQYPAYPGEP
EIASLSQQSLSSASVSRPTTTAAPLTSTVPELSGTVCQFPSTSVMGQQHARTPVSQAEEC
PFRALRCSGETQGSCKSSEMFGESMSCYASIASHLPSEQPQSCGAINTNGFQALGDSLLP
SGAQDGDLEGLEPPDLLPDLLPQLEAALSQHDGSNCSWADSSQERGPEHRKSPPVENKDE
KPRKNTNGPGSQVRVLSPPMKSSSSSSSSSSSSSSSSSSSSEKRTSRRTHHQMESMQLEK
QEKANRIISEAIAKARQRGEKNIPRVMSPESFPSSSSQHKTHRDREHKGNGKARPKEKAC
RKACIVPSSKTKQKAKIGKIVIKIGKKKKRKPPSSEEESDEDRPPRHTSKDNDSKRRSNR
QVKRKKYAEELEARLSDEEVKVIVKAKKTNTAASKQPAVQLFVENPTEEDAAIVDKIMSS
RIVKKEVSPGVVVEGEEFFVKYKNYSYLHCEWATEQQLEKDKRIPQKIKRFKMKQAQRAL
FFADMEEDPFNPDYVEVDRVLEVSYCEDKDTGEEVVYYLVKWCSLPYEDSTWELKDDVDQ
SKIEEFEQLQAARPDSCRVERPPANLWKKREQSREYRNSNSLRDYQLEGVNWLLFNWYNR
RNCILADEMGLGKTIQSITFLEEIYRAGIKRPFLIIAPLSTIANWEREFHTWTHLNVIVY
HGSMVSRQMLQQYEMYFRDAQGRVIRGAYKFQALITTFEMILGGCPELNAIDWRCVIIDE
AHRLKNKNCKLLEGFKLMSLEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSENTFMQEF
GDLKTEEQVQKLQGILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF
SFLAKGAGQANMPNLVNTMMELRKCCNHPYLIKGAEEKILEDFREVYSPIAIDFHLQAMV
QSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQ
AAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQN
KAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSLGGGTGGGAVQQQQLSKK
EIEDLLRRGAYGAIMDEEDEGAKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASG
NRTDISLDDPNFWDKWAKKADIDVDMVNGRNSLVIDTPRVRKQTRPFSATKDELAELSEG
ESDNDETKPKLRRNHDRLNSYGRTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTEWDVE
AICRALLSYCLVHYRGDDKIKSFMWDLIAPTEDGRTKELQNHLGLSAPVPRGRKGKKMKT
QSSSFDIHKAEWLRKHNPEHMLQDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGSQAQQV
LDGVEASDIKIWVPEPDHSDLPTLWWDTISDKCLLLGIYKHGYEKYNTIRADPTLCFLDR
VGRPDEKAIAAEQRGNDFMDGDVDDPEYKPAPALLKDEMEDDASSPGDLVVTDNAGDAVP
VTDGQSQSVYWPSSSILTARLRRLITASQRFTKSRQILHIHQSQSQSQSQSQQTMIMSAP
LCPLPPTLNDTINPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPDLGRFDWTKFRAM
ARLHKKTDESLQKYLCAFTAMCRQVCRLPPKEGDSAVDPSLTIQPITEERASRTLYRVEL
LRQVREQVLRQPLLYERLSLCQMSSDLPVWWEAGTHDRDLLIGAAKHGVSRTDYHILRDP
ELCFMAAQRNYSQTKAAQQQSRTSTPLLHPQYQATSSALTGSPLPPPAPRDPEPCGVVPK
VEPASEGEESREKQGESWSPPRAPATPTGLEEKPISDGMDSERQMVAARTKPLTPNSSER
KPKKASKRGRREARRGSESDSDGSSSSSSSRSSSSSSSSSSSSSHSGSSSSSSSSSCSSG
SSSSSSSSSSSSDDSESEREEGKKKVPVATIVKGFDEDSVASLSTTQDETQDTHVAENGI
TNNSSHSFQGGGYILAASYWPKDRVIINRLDSICQAVLKGKWPGTRRVYEPGGAVASFYT
TKLLDNANSLCEDPSASPKGSKVTKHVAENKEFSVKLNDQEGGLKLTFQKQGLPLKRPLE
TEEGPQAQQQYLARLQELQSASDTGLADITKPHCSFQSVPPGVAGQMRLNGIADGQPVVK
RRRGRRKNVEGMDLLFMNKSRVPAVPDQVPPGWGGIGQVGMAAAAVPGFSQSSSQSPADT
EMRVPVINLKDGTRLAGDDAPKRKDLEQWLKEHPGFVADTGAFIPGVNKMQMQFHFQDGR
PKQKRHRCRNPNKIDVNSLTGEERVQIINRRNARKVGGAFAPPLKDLCRFLQENPEYGVP
PEWADVVKQSGYLPESMFDRILTGPIVPEEVSRRGRRPKNPLAKAAAAATAAAAPNPAAS
ALGLNPLLANGLLSGMDLTSLQAFQQNLQSLQSLQLTAGLMGLPSDASNLAASNLAAMFP
MMLSGMAGLPNLLNMNSLLGKPAQEGAAGSEDKVKGTASGGTGEASASKAPSNTSDTKGE
RTEGLNTTPSSTYSVTSSATAPQSASAASAASSHPLSLNPLLLSSMIYPGMLLTPGLNLP
VSATQPQSSNSDPTPPAFSQSSPLETQQPAAEKDGEEDEDDEALEEEDDDDDDDDEESAE
QKENSGPEGLRKAESSSSESGSSSSSSDNSDSSDED
NT seq
9111 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttgatgaccctaacctctttgttggaggtttggacgggctggatgaagaa
ggtttcccctcagcaccgtcacttgtggatgagctaaatctcagtgctgactttgagccc
ctccaagtggagcctctagggacggggaagcaccaagacatgataccgacagtttcttcc
acatctgctcaacaagccatgcccacttacagtcatcagatggaccactacattggcttg
aaggcacagaatcctatggggcaggcatttcctgttcaagggggcacaggtggtggagat
ggtggtataattgcagagcaacatggccagtaccataatgccaccatcactcaagtacct
caatcaaatgggctgttctgtaacagtagcagtccaatgtggggcaaccaggaccagaat
gggaacatgtaccaccccttatctcaacagcagcaacagctttgccatcagcagcagcag
cagcagcagcagcagcagcaattgcacaaccagcaaattcatgtaagacaacagcaaaca
cagcagcaacaccacccctgtcatcagcaacagcaacagcagcacagaatacggcagcag
atgcaacagcagcaaagtcatcagcaacagctgctaaaccagcgccagcaccaacaattg
aacacacagactatgtccctgcagcaacagcagcatcataatttctcctttcaccaggga
agtcaaactcagagccaacaacaagttcaccatagtcaacagcaggttccgcaccagcta
agtgtaggaggaccaaggtttcattcaagggctctgccaactaagacctatctggatagt
caaaatgcttctctgtccggcacttgcttacagcagcagcagcagcagcagcagcagcag
cagcagggtagctaccagttgaacaggggaggtcaagccttctctggatcaggcctggaa
gaccgtaacctgcccttccccatgcattcatcgtctgtggttcactccatgcccacatac
tcagtcagttctaccagcaactaccaaccggcgcagtaccctgcctaccctggagaacca
gaaatagccagtcttagtcagcagtctttgtcatcagcatctgtgtctaggcccaccacc
actgctgctcctctcacttctacagtgcctgagctctcagggacggtatgtcagtttcca
tccacttcagttatgggtcagcagcacgctaggaccccggtcagccaggcagaagaatgt
cctttccgtgctttacgctgttctggagaaacccagggaagctgcaagtcttctgagatg
tttggtgaatctatgagctgctacgccagcatagccagtcacctgccctctgagcagcca
cagagttgcggggccatcaacactaatggatttcaagctttgggagacagtctcctgcca
tcaggggctcaggatggggacttggaggggttggaacctcctgacctcctgcctgactta
ctgccccagctggaggcagctctcagccaacatgatggatccaactgttcgtgggctgat
tccagccaggagagaggacccgagcacagaaagtcaccacctgttgagaacaaggatgaa
aagcctcgaaagaacactaatggtcctggtagccaggtacgggtcctcagtcccccaatg
aagagcagctcatcgtcctcctcctcttcctcatcatcttcatcctcatccagctcctcg
tcggagaagaggacctcgcggaggacacatcatcagatggagtcaatgcagttggaaaag
caggaaaaggccaataggataatatcagaggcaattgcaaaagctcgtcagcgtggtgag
aagaatatcccccgggtcatgagccctgagagcttccccagctcttcctctcagcacaag
acccaccgggaccgcgagcataaaggaaatggcaaggcaaggccaaaagagaaggcctgt
aggaaggcctgcattgtaccttcctccaagaccaagcagaaggccaagatcgggaaaatt
gtcatcaagattgggaagaaaaagaaaagaaagccaccgtcttcagaggaggagtctgat
gaagaccgtccacctcggcatacttctaaagacaacgactcgaagagacgatctaatcgc
caggtgaaaaggaagaagtatgctgaagagctggaggcccgcctgtcagatgaggaagtc
aaggttattgtcaaagccaagaaaaccaacacggcagcatccaagcagcctgctgttcaa
ctctttgtagaaaatcctactgaggaggatgccgctattgttgacaaaatcatgtcctct
cgtatcgtcaagaaggaggtttctccaggagtggtggttgaaggggaggagttttttgta
aaatacaaaaactactcctatctacactgtgagtgggccacagagcagcagctggagaag
gacaagaggattccgcagaagatcaaacgcttcaagatgaaacaagcacagagggcactc
ttcttcgcagatatggaggaggacccttttaaccctgactacgtagaggtggacagagtg
ctggaggtgtcgtactgtgaggacaaagacacgggggaggaggtggtgtactacctggtg
aagtggtgctctctgccttatgaagacagcacctgggagctgaaggacgacgtagatcag
agcaagattgaagagtttgagcagctgcaggcagccaggccagactcatgcagagtggag
cgacccccggccaatctgtggaaaaagagggagcagtcgagggaatacaggaatagcaac
agcctcagggactaccaacttgagggggtcaactggctcctcttcaactggtacaacaga
cggaactgcatcctggccgacgagatgggcctgggaaagaccatccagtccatcacattc
ctagaagaaatctatcgcgcaggcatcaagcggccattcctcatcattgccccactctcc
accatcgccaactgggagcgcgagttccatacttggacccatctcaatgtcatcgtctat
cacgggagcatggtcagcaggcagatgctccagcagtatgagatgtatttcagggatgca
cagggccgcgtgatacgaggtgcctacaagttccaggctctcatcaccacgtttgagatg
atcttgggaggctgccctgagctcaacgccatagattggcgctgtgttatcatcgatgag
gcccaccgcctcaagaacaagaactgcaagctgctagaaggcttcaagctcatgagtctg
gagcacaaggtcctgctgacgggcactccactccaaaacacagtggaggagcttttcagc
ctgctccacttcctggagcctgcacgtttcccctcagaaaacaccttcatgcaggagttt
ggagacctcaagactgaggagcaggtacaaaagcttcagggtatcttaaagcccatgatg
ctgcgccggttgaaggaggacgtggagaagaagttggcccctaaagaagaaaccatcata
gaagtcgagctcaccaacattcagaaaaaatactaccgtgccatcctagaaaagaacttc
tctttcctggctaaaggagctggccaggcaaatatgcccaacctggtcaacacaatgatg
gagctgcgcaagtgctgcaaccacccctacctcatcaaaggagcagaagagaagatccta
gaggacttcagggaggtgtatagccctattgccatcgactttcacctgcaggctatggtg
cagtctgctgggaagctggtccttattgacaaactgttgcctaagatgaaggccggaggg
cacaaggtgctcatcttctcccaaatggtgcgctgcctggacatcttggaagactacctc
attcagagaaggtacttgtatgagcggattgatggtcgtgttcgtgggaacctgcggcag
gctgccatcgatcgcttcagcaagcctgactcagaccgcttcgttttcctcctgtgtaca
agagctggaggcctgggcatcaacctcacagcagcagacacctgcatcatctttgactct
gactggaacccgcagaacgacctgcaggcccaggctcgctgccatcggatcggtcagaac
aaggcagtgaaggtgtaccgtctgatcaccaggaactcgtatgagcgggaaatgtttgat
cgtgccagcctcaagctgggcttggacaaagcagtgctgcagagcatgagtggccgagat
aacagcctgggaggaggtaccgggggaggggcggtgcagcagcagcagctatctaagaag
gagatcgaggatctgttgcgacgtggtgcctatggggccatcatggatgaggaggatgaa
ggggccaaattctgtgaggaggacattgaccagatcctccagcgcaggacaaaaaccatc
accattgagtctgagggacgaggatccacctttgcaaaggccagttttgtggcgtccgga
aaccgcacagacatctctctggatgaccccaacttctgggacaagtgggccaaaaaggct
gacattgatgtggatatggtcaatggcagaaacagcttggttattgacactccccgtgtc
agaaagcagacgcggcccttcagcgccaccaaggatgagctggcagagctttctgaaggt
gaaagcgacaacgatgagaccaaacctaaactcaggcgaaaccacgatcgcctcaacagc
tacggacgcacagagtgcttcagagtagagaaaaacctgcttgtatatggctggggtcgt
tggaaggatattctcaaccatgggcgttttaagaagcagctgacagagtgggatgtggag
gccatctgcagggccctgctgtcctactgtctggttcattatcgtggggacgacaaaatc
aaaagcttcatgtgggacctcattgctcctactgaagacggacgcactaaggagctgcag
aatcacctgggtttgtctgctccagtccctcgaggcagaaagggtaagaagatgaagaca
cagtccagctcttttgacatccacaaggcagagtggctaagaaaacacaacccagagcac
atgcttcaggatgatggctacaagaaacaccttaaacatcactgcaacaaggtgctgctc
agggtcagaatgctctactacctgaaacaggaggtgataggaagccaggcccagcaggta
ctagacggcgtggaagcaagtgacataaagatctgggtgccagagcctgaccattctgat
ctgccaaccttgtggtgggataccatctctgacaagtgtctgctgctgggtatctacaag
catggttatgaaaagtacaacactatccgtgcagaccctaccctgtgcttcctagaccgt
gtgggacgaccagatgagaaggccatcgctgccgaacagagaggcaatgatttcatggat
ggcgatgtagatgatccagaatacaaacctgctccagccttgctgaaggacgaaatggag
gatgatgcttcttctcctggagacttggttgtcactgacaacgctggagatgcagttcca
gtgacggatggtcaaagtcaaagtgtctactggccctcttcctcgatactgacagccagg
ctgaggcgtctgatcacagcttcccagcgcttcaccaagagccggcagattctccacatc
caccagtctcagtctcagtctcagtctcaatctcagcagaccatgataatgtctgctccg
ctctgcccgctgccccccacactcaacgacaccattaaccccaagatggctgctaagatc
gaacgccaacaaagatggaccaggcgagaagaggccgacttctatcgggtggtctccact
tttggtgttgtttttgacccagacctcggccggtttgactggaccaagttcagggccatg
gctcggctgcacaagaagactgacgagagcctgcagaaatacctttgtgctttcaccgcc
atgtgcaggcaggtgtgtcgcctgccacccaaggaaggagactccgcagtggacccgtct
ctcaccatccagcccatcactgaggagcgagcgtctcgcacactgtacagagtagagttg
cttcgccaggtgagagagcaggtccttcgtcaaccattactctatgagcgcctgtcactg
tgccagatgagctctgacttacctgtgtggtgggaagctggtacccatgaccgtgacctg
ctaattggtgctgccaagcatggcgtcagccgcacagattaccacattctccgagaccct
gagctttgcttcatggctgcccagcgcaactacagccaaacgaaagctgcacagcagcaa
tcacgcacatccacaccgctcctacaccctcagtaccaggccaccagctcagcgttgaca
ggctctccactgcctccgcctgccccgagagacccagagccctgtggagttgtacccaaa
gtggaaccagcctcagagggggaggaaagcagggagaagcaaggggagagttggagtcct
cctagagcgccagctactcctacaggtctggaggagaagcctatttctgacgggatggac
agtgagaggcagatggtagcagcaagaacgaaacctctcactcccaattcctcagagagg
aagcccaagaaggccagcaagaggggccgcagggaggccaggcgtggctcagagtccgac
tcagatggctcctcctcaagctcttcatcacgctcctcttcctcttcatcatcttcatct
tcttcctcatcacattctgggtccagttcttcctcttcttcatcgtcttgctcctctggc
tcttcatcctcatcctcttcttcctcatcatcttctgatgacagtgaaagtgagcgagag
gaaggaaagaagaaagtgcctgtagcaacaattgtaaagggctttgatgaggacagtgtg
gcatctctgagcactacacaggatgaaacacaagacacccacgtggctgagaacggcatc
accaacaactcctcgcattctttccagggaggagggtacatactcgctgcatcttactgg
ccaaaggatcgagtgataatcaaccgcctggacagcatctgccaggcagtgctaaagggc
aagtggccaggaacacgccgggtctacgagcctggaggtgcagtggcctccttctacacc
accaagctgctggacaacgccaacagcctgtgcgaggacccctctgcctcgccaaagggg
tcaaaggtgaccaagcatgttgcagaaaacaaggagttctcagtaaaactgaacgatcag
gaaggaggtctgaagttaaccttccagaaacagggtctccctctaaagaggcccctggag
acagaggagggtccccaggcgcagcagcagtacctggcccggcttcaagagctgcagagt
gcctcggacacaggcctggcagacatcaccaagccacactgcagcttccagagcgtgccc
ccaggtgttgctggtcagatgaggctgaatggaatagcggacggtcagccagtggtaaag
aggcgaaggggaaggaggaagaatgtggaggggatggacctcctcttcatgaacaagagt
cgtgtccctgctgtccctgatcaggtgcctccaggttggggtggtattggccaggttggc
atggctgcagccgctgtgccgggcttcagccagagctcaagtcagagccccgcagacaca
gagatgagggtccctgtcatcaacctcaaagatggcacccggcttgctggggacgacgct
cccaagaggaaagatctagaacaatggctgaaagagcaccccggctttgtggcagacacc
ggagcctttatccctggggtaaataagatgcaaatgcagttccatttccaggatggccgg
cctaagcagaagaggcaccgctgtaggaaccccaacaagatcgatgtgaacagcctgaca
ggagaggaaagagtccagatcatcaacaggagaaacgcacgcaaggtcggtggagccttt
gctcctcccctgaaggatctgtgccggttccttcaggagaacccagagtacggagtccca
cctgaatgggcagatgttgtcaagcagtcgggttacctcccagagagcatgtttgacagg
atcctgacaggacctattgttcctgaggaggtgagccggcgtggacggcgacctaagaac
cctctggccaaggcggcggcagcagcaacagcagcagcagcaccgaacccagcagcctct
gccctgggcctgaaccccctgttggccaacggccttctctccggaatggacctaaccagc
ctgcaagccttccagcaaaacctgcagagtttacagtccctgcagctcaccgcaggactt
atggggcttccatccgatgcaagcaacttggccgcaagtaacttagctgccatgtttccc
atgatgctgtctggtatggcaggattgccgaacctgcttaacatgaacagcttgcttggg
aagcctgctcaggaaggtgcagcgggatctgaggacaaggtgaagggaactgccagcggt
ggaacaggagaggcgtctgcctctaaagccccctctaacacctcagacaccaaaggagaa
aggaccgagggcttgaacacaactccttcctccacttacagcgtgacttcctctgccacc
gccccacaaagtgcttcagctgcctcggcagcctccagtcacccactgtctcttaacccc
ttgttactctccagtatgatttacccagggatgcttctcactccaggccttaaccttcct
gtgtctgccacacagccgcagagctcaaacagtgaccccacccctcctgctttctcccag
tcatcgccactggagacacagcagccagcagcagagaaagacggagaggaagacgaggat
gacgaggctttggaagaagaagatgatgatgatgatgatgatgatgaggagtcagcagaa
caaaaagagaacagtggtcctgaaggtttgcgaaaagcagagtcatcttcatcagagtct
gggagctcgtcttcatcctcagacaattcagactccagtgacgaggactga
DBGET
integrated database retrieval system
