Scomber scombrus (Atlantic mackerel): 133981492
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Entry
133981492 CDS
T10651
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein
KO
K20163
DENN domain-containing protein 4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Membrane trafficking [BR:
ssco04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
133981492 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133981492
NCBI-ProteinID:
XP_062276203
LinkDB
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Position
6:complement(8969153..8985970)
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AA seq
1719 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDSSKLLEDELHFDDAGPKSVKPNAPITEVAVVIRSLGEEVP
PGFTCVESTPSGLSAELNGASLRGPQIFLCIKRGRDKPPLTDLGILYEWKEKLKPGCHIV
QTTPSGRPANISSSSSQRIYITYRRAPKSQPHTSLAVTDVCIIIPGKGETPPHTFCKVDK
NLNSSMWGSSVYLCYKKSLAKANTIACKAGLLCRYPEEDYESFPLPESVPMFCLPMGATI
ECWPTHTKHSLPVFSTFVLTGASGEKVYGAAIQFYEPYSEENLSERQRSQLGLPSSDLGP
DGSRNVYSNKSICLLSHWPFFQSFRSFLTFLYRYSISGPHALPIEKHISHFMHNVPFPST
QRPRILVQLSPHDSLILSQPVSSPLPLSGGSLSTLLLNLGPKNAATLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALAGVLSAPCPFIVGVDSRYFDLYVPP
ADISCVDLDTNTIFQKDDKKALTWKILPRRACKHLLNTLNKLHQQLTEDGQFNREDVQIE
QTVTDSELTGGKSLHTLELEIQEAFLRFMAAILRGYRSYLLPITQAPSEKTTDANSLFDL
QGFLKSRDRSHQRFYSLMTKTQMFSRFIEECSFVSDKDASLAFFDECVDKMDSERPEDTR
LIELDESHGSEHTVYINPPELPPLPQGEEHPLCYSYSGFPVLNAELLEPLEGPNPPSAGL
ASRHSSPASPTAIFRRSKQEIKLAQRMAKTYSSMPQMWSKCLLRHCYGLWFICLPGFVST
CHSKVRALRMAYDVLRKMQDKKLQAPDEVCYRVLLQLCGQYSQPVLAVRVLFEMKKAGVQ
PNAITYGYYNKAVLESTWPSTTRGGYFLWGKLRNVVLGVVQFKRASRKHQTPQRDPQLSD
GSDLDTVSHGSLDSANDSAERTSIDTDFTKMDSSDDGFSTGGQSDQGYDSLSKEEERMCS
RESDSMPLLEDKGPRQSTPEIEVPISSTSPSTRVCKSESADAGNGGRLVSSPSSDTALCG
VLPKSQRPKSLDLSSGQGTLRLAVPHLASTKQHHLAADRLHGVEEEEMESDQSKQKPLVE
RSISCSTGTVNRTGIEMGFDPLSLMVTATVQESDQGNSSTPTACRELAEEIENYINNTNS
PLSSRTPSMDLQNPSSPLLHSASSPYTSPRRSTLLRSNTQLPLPVKPRERLRPSPSLPLG
VCNKDRERPSSLVSPSSPTPSTSSFSMDSLFTPTLDIFKSSVISAGKGVAEKASRLYSRL
SSQTSLTQDSNCDQISVSSLTSGEADCSSLFDNDSCLDPDGFTSPQHGSISRLRRSPIVG
HTNLSSPSTPNRVFRHNSFSGGLALPSKTPHTPDSSPDTSRFQPTPNYTIEVLMSSCSLC
KTCDCLVYDEEIMAGWTANDSNLNSTCPFCGTAFLPFLNVEIKDLRPQSRSSKESNPVTE
EDTSVSLNPEAKMSAADRSAQSPAAPPEESSRSAGPATMSAPTSASAPVTVPYLSPLVLW
KELESLLVNEGDQAISSPSVVDQHPIVFWNLVWYFRRLELPSNLPALILASQHYSHGDQT
FQNISSEDSKQVLVRIMWDNLKLHQDKVQPCYVLWNTHCANSLVRSGLCEEGQLFTVELL
QGFVRSIKKGDVYQPMSQIIQLLGPELGFKRQRSLYRDLLFLTLVSLGKNNINIDAFDRE
YKLAYDRLTPNLVKLTHNCDRPPGAGVMECRRTFGEPSL
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggataaagggcctcgtgtagccgactactttgtggttgctggcctcactgac
tcgtccaagcttttggaggacgagctccattttgacgacgccggtcccaagtctgtgaaa
cccaatgcccccatcaccgaggttgctgtggtgatccgttctctgggtgaggaggtaccc
ccgggattcacctgtgtagaaagcaccccgtcaggcctctctgcagagctcaatggagct
agcctcaggggcccgcagatattcttgtgcatcaagcgaggcagagataagcctccactg
acagatcttgggatcttgtatgagtggaaagagaagctgaagcctggatgtcacatcgtc
cagaccacgccctcaggtcgccctgccaacatcagcagctcatcctcccaacgcatctac
atcacctaccgccgcgccccgaagagccaaccccacacttcactggctgtcactgatgtt
tgcatcatcatccccggcaaaggggagactccccctcacaccttctgcaaggtggacaag
aacctcaacagcagcatgtgggggtcatcagtctacctttgttataagaagtctctggct
aaagcaaacacaatcgcatgcaaagcaggtctgttgtgcaggtacccagaagaggactac
gagtccttcccactgccggagtcagtgccaatgttctgcctgcccatgggggcaacgatc
gagtgctggccaacacacaccaaacactccctgcctgtcttttcaacatttgtactgaca
ggcgcctctggagaaaaggtgtacggagcagcgatccagttctatgagccttactcagag
gagaacctgtctgagcgtcagcgctcacagcttggcttgccgagctctgatctcggacct
gatgggagcagaaacgtatacagcaacaaaagcatctgtctcctctcccactggcccttc
ttccagtccttcaggagctttctcactttcctctaccgatactctatttctggaccacac
gccctgcctattgaaaagcacatctctcacttcatgcacaatgtgccatttccctcgact
cagagaccacgcatcttagtgcagctgtctccacatgacagcctcatactgagccaacct
gtgtcctctccactgcctctcagtggtggaagcctctctacattactgctgaatctgggc
ccgaaaaacgcagccactctgctagtgttggctgtcacagagcacaagatcctagttcac
tcactgcgtccagctgtactcaccagtgttacagaggcccttgtttctatgatcttcccc
ttccactggccatgcccttacatacccctatgcccgctggcactggcgggtgtgctcagt
gcgccttgccctttcattgtgggtgtagactccagatactttgacctttatgtgccccca
gctgacatcagctgtgtggatctggacaccaacactatcttccaaaaagatgacaagaag
gctttaacatggaaaatcttgcccaggagagcctgcaaacatcttctaaataccctgaat
aagctccatcagcagcttactgaggatggtcagtttaaccgtgaagatgtgcagattgaa
caaacagtgaccgacagcgagctcaccggtgggaagagcctccacactctggagctggag
atccaggaggcctttctacgtttcatggcagccatcctacgaggctaccgctcctacctg
ctgcctatcacccaagccccctctgaaaagaccactgatgccaactccctttttgacctc
caaggcttcctcaagagcagagaccgctcccatcagaggttttactccctcatgaccaag
acccaaatgttcagccgtttcatagaggagtgctcctttgtcagtgataaagatgctagc
ctggctttctttgatgagtgtgttgataagatggacagtgaacggccagaggacaccaga
ctgatcgaactggatgaatcccacggcagcgagcacaccgtctatatcaaccctccagag
ctgcctccactgccacagggagaagagcatcctctgtgctatagctactctgggttccct
gtgctgaatgctgagctcctggaaccgctggagggaccaaatcctccatcagccggcttg
gcttcacgccacagcagcccagccagccccacagccatctttagacgctctaaacaggag
atcaaattggctcaaaggatggccaaaacctattcatctatgcctcagatgtggtccaaa
tgtctgctgcgtcactgctatggcctatggttcatctgcctgcctggttttgtcagcacc
tgccactcgaaggtgcgggctctacgcatggcttatgatgtgctgaggaagatgcaagac
aagaagcttcaggctccagatgaggtgtgttaccgtgtgttgctgcagctgtgtggacag
tacagccagccagttctggctgtcagagtgctgtttgagatgaagaaggctggagttcaa
ccaaatgcaatcacttatggatactacaacaaggcggtgttggagagcacctggccctcc
accaccagaggaggctactttttgtggggaaagctgaggaacgtggtcctaggtgtggtc
cagttcaagcgagcaagcagaaaacaccagacgccgcaaagagatccccagctctcagac
ggcagtgatcttgacacagtcagtcacggcagtttggacagtgctaatgactccgcggag
cgcacttccattgacactgacttcactaaaatggactccagtgatgatggatttagtaca
ggtggacagtcagaccaaggctatgattccttgtccaaagaggaggagaggatgtgcagc
agagagagtgacagcatgccactgctggaagacaaaggaccgaggcagtccacacctgag
atcgaggttccaatcagcagcacctctccttctacaagagtttgcaagtcagagtctgcc
gatgcaggcaatggtggcagattggtttccagtccatctagtgacactgctctgtgcgga
gttctgccaaaatcacagcgaccaaagtctctggacttgtctagtggacagggaactctg
agactggccgtccctcacctcgcctcaacgaagcagcaccatctagctgctgacagactg
cacggagtggaggaagaagagatggagtctgatcagagtaaacagaaacccctagtggag
aggagtatcagctgcagtaccgggactgtgaacaggacaggtatcgagatggggtttgat
cctctgtcactgatggtgacagcaacagtacaagagagcgaccagggcaacagcagcaca
cccaccgcctgccgtgagctcgctgaggagattgagaactatataaacaacaccaacagc
cctctgagcagccgcacacccagtatggacttgcagaacccctcaagccccttgttgcac
tctgcgtcatctccttacacctctccccgacgctccacactgctccgctccaacacacaa
ctcccactgcctgtcaaacccagggagcggctgaggccatcaccgtctcttcccctgggt
gtttgtaacaaagacagggagaggccttcctccttggtgtcaccctcatcacccactccc
tccacctcatcgttctccatggactccctgttcacaccaactctggatatctttaagagc
agcgtcatatcagcagggaagggcgtggctgagaaggccagccgcctctactcccgtctg
tcttctcaaacttcgttaacacaggattcaaactgtgaccagattagtgtatcctcactg
acctcaggagaggcagactgctcctcgctttttgataatgattcctgtttggacccagat
ggctttacctccccccagcatggcagcatatctcgactcaggaggagccctattgttggt
cataccaacctgagcagccccagcacccccaacagagtgttcagacacaactccttctct
ggtggtttggcacttccatctaaaactcctcacactccagattcctcccccgacaccagc
cgcttccaacccactcccaattacaccattgaggtgctgatgtctagctgttcactttgt
aagacgtgtgactgtctggtgtatgacgaagaaatcatggctggctggacagctaacgac
tccaacctcaacagcacttgtcccttctgcggcacagccttcctgcctttcctcaatgtg
gaaatcaaagatctgagacctcaaagcaggtcttccaaggaaagtaatcctgttacagag
gaggacacgtctgtgtcactcaatcccgaggccaaaatgtctgcggcagacaggtcagct
cagtcacctgcagctcccccggaggagagcagcaggagtgctgggcctgctacaatgtct
gcaccaacttcagcctctgctccggtgacggtgccgtacctgagtcctctggttctgtgg
aaggagctggagagcctgctggtgaacgagggtgaccaggccatctcctccccaagtgtt
gtcgaccagcaccccatcgtcttctggaaccttgtgtggtacttcagaaggctggagctg
ccgagtaacctgccggctcttatcctggcctcccagcactatagccatggagaccagact
tttcagaacatttcgtccgaggacagtaagcaggtgctcgtgaggattatgtgggacaac
ctaaagttacaccaagacaaagttcaaccctgttatgtcctgtggaacacacactgtgct
aactccttagttcgctctgggctgtgtgaagaaggccagctcttcaccgtggagcttctg
cagggttttgtgagaagcattaagaagggtgatgtctatcagcccatgagccagatcatc
cagctcctcggaccagagctgggtttcaaaagacaaaggagcttgtacagagatttattg
ttcctcactctggtgtctttgggcaagaacaacattaatattgatgcatttgaccgggag
tataagttggcatatgatcgtctcacccccaacctggttaaactgacacacaactgtgat
cgcccccctggagcaggggtcatggagtgcaggaggacttttggggaacccagtctgtga
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integrated database retrieval system
