Scomber scombrus (Atlantic mackerel): 133981543
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Entry
133981543 CDS
T10651
Symbol
man2c1
Name
(RefSeq) alpha-mannosidase 2C1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00511
Other glycan degradation
Brite
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
133981543 (man2c1)
Membrane trafficking [BR:
ssco04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
133981543 (man2c1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Ams1-like_1st
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
DUF237
Motif
Other DBs
NCBI-GeneID:
133981543
NCBI-ProteinID:
XP_062276275
LinkDB
All DBs
Position
6:19295931..19303682
Genome browser
AA seq
1022 aa
AA seq
DB search
MYHQPVLKNRRTLLERAEKFISDIYFTDCNLRGRLYGESCPLESLSSFLSPKRITFTEAS
KQNFAPYKVGNTFGPTWWTCWFKVTLKIPESWKGKEVHLLWESDGEAMVWRDEQPVQGLT
KDGEKTSYIVTDCLKEEEPHSVILYVEMACNGLFGAGQGSMIAAPDPSRKFSVQKAELVI
FNRDVRELVTDFEMLVDIVKELGEGEQRGYQALFIVNEMVNLCDPSEPSSFSKAHSLAHN
FFSQRNGQSQHTVHAMGHCHIDSAWLWPYEETIRKCGRSWVTVIRLMEKNPDFVFTCSQA
QQFQWVKNWYPGLYSQIQHYSKKGQFIPVGGTWVEMDGNLPSGESMVRQFLEGQHFFEKE
FGILCKEFWLPDTFGYSAQLPQIMQGCGIGNFLTQKLSWNLVNTFPHNTFFWEGLDGSKV
LTHFPPGNSYEMKGKVEDLVKTVKHNKDKGRANHSAVLFGFGDGGGGPTQLMLDRLQRVQ
DTDGLPKVQMSSPDKLFSQLQHDSALLCTWTGELFLELHNGTYTTQAQIKQGNRQCEILL
HDIEIASSLALCRDRTFQYPMEKLRELWRLLLLNQFHDVIPGTCTEMVVEDALRYYEDIR
SDGAALLRDSCGALVSKGNSTAVFNSLPWERQEVIQIQDGTGKPGLALVRVPSIGLTPVK
DTQPVTPVCVTAQADGTVVMENGILQTVINKDGTLASLFLMNANREAISDSCHGNQFVMF
DDVPLYWDAWDVMDYHLQTRKPVLEVVQPVHVVSSDGLQGRVSFTLRISDKSTITQEIVM
DAMCPYIKFNTQVKWAESHKFLKVEFPVRVRSPNATYEIQFGHLQRPTHRNTSWDWARFE
VWGHKWTDLSEHNFGVALLNDCKYGYSVHRNTMTLSLLRAPKAPDTNADMGTHHLTYAVM
PHTGSFQDASVIQCAYNLNFPLRLIQCSLDTLPFSAFSISTTAVILETVKQAEDRKGVFV
VRLYESHGSSVTATLSTTLQIREAWHCDLLEKQDPTQPAHITSDGITLNFSPFQIVSLLL
IF
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaccagcctgtgctgaagaacaggcgcactcttctcgagagggcagagaaattt
atttctgatatatatttcacagactgcaatctgagaggacgactctatggagaatcttgc
ccgctggaatccctctcctctttcctttcccctaaaaggatcacattcactgaagcctcc
aagcagaactttgcaccttataaagttggcaatacctttggaccgacgtggtggacttgc
tggtttaaagtgaccctgaaaatccctgagtcctggaaaggaaaagaggtccatcttctg
tgggaaagtgatggagaagcaatggtttggagagatgaacagccagttcagggcctgact
aaagatggtgaaaagacaagttatatcgtaactgactgcctcaaagaggaagaaccacac
agtgtcatcctttatgtagaaatggcttgtaatgggctttttggagctggtcaagggtcc
atgattgcagccccagatccaagcaggaagttttctgtacagaaggctgagctggtgata
tttaaccgggatgtaagggagctggtgactgatttcgagatgcttgtcgacattgtaaag
gaactcggagagggagagcagcgaggctaccaggcactctttattgttaatgagatggtg
aacctctgtgacccctctgaacccagctctttctccaaagcacacagtctggctcacaac
ttcttcagccaaaggaatggacaaagccagcacactgtgcatgcaatgggccattgccac
atagactcagcctggctgtggccctatgaagagaccattcgtaaatgtggccgaagctgg
gtgacagtgattcgactgatggagaagaacccagattttgtgtttacttgctctcaggcc
cagcagttccagtgggtaaagaactggtacccgggactctactcccagattcagcattat
agcaagaaaggccagttcattccagttggaggaacatgggtggaaatggatggcaatctt
ccttcaggtgaatcaatggtcaggcagttcctggagggccagcacttctttgaaaaagag
tttgggatcttgtgcaaagagttctggcttccagatacatttggctactctgcccaactt
cctcagataatgcaaggctgtggaattggcaatttcttgacacaaaaactcagctggaac
ttagtcaacaccttccctcacaacactttcttctgggaaggtctcgatggctccaaggtc
ctaactcatttcccaccaggaaattcctacgaaatgaaaggcaaagtcgaagacctggtg
aaaactgtgaagcacaacaaagacaaaggcagagccaatcacagtgcagtactgtttggt
tttggtgatggtggtggtggacccacacaactgatgctagatagactccagcgggtccag
gacacagatggacttcccaaggttcagatgtcgagccctgacaagctcttctctcagctt
cagcatgactcggctctgctgtgtacttggactggagagctcttcctagagctacacaat
ggcacctacaccacacaggcacagattaagcaagggaaccgccagtgtgagattctcctt
cacgacattgagatagccagcagcctggcgctgtgtcgggacaggacttttcagtatccc
atggagaagctgcgggagctctggaggctgcttcttctaaaccaattccatgacgtcatc
cctggtacttgtacagagatggttgtggaggatgcactcaggtattatgaagatatccgt
agtgatggtgccgcactgctgcgtgattcctgtggtgccttggtctcaaagggcaactcc
accgctgtgttcaactctctgccgtgggagcgccaggaagtcatccagattcaagatggc
actggtaaacctggtctggctctggtgagagtccccagcatcggtttgactcctgtcaaa
gacactcagcctgttactccagtctgtgttactgctcaggctgatggcactgttgtcatg
gaaaatgggattttacagaccgtcatcaataaagatggcactttggcttcactgtttttg
atgaatgcaaacagagaagctatctctgatagctgtcatggcaaccagtttgtcatgttt
gatgatgtccccctgtactgggatgcctgggatgtaatggactaccaccttcagacaagg
aagccggtgctggaggtggtgcagcccgttcacgtggtgtcctcagacgggctccaaggc
agagtcagcttcactctgaggatcagtgacaagagcactatcacacaggagattgtcatg
gacgccatgtgtccttacatcaagtttaacacacaggtgaagtgggcagagtcacacaag
ttccttaaggtggaattccctgtgcgagtacgcagtcccaacgctacatatgagatccag
tttggccatctgcagagacccacacacaggaatacttcatgggactgggccagatttgag
gtttggggtcacaaatggaccgatctgtcagagcacaattttggagttgcactgctgaat
gactgcaaatacggctattcagtacacaggaacacaatgacactatccctgcttagagca
ccgaaggccccagataccaatgctgatatggggactcatcatttaacttatgcagtcatg
ccacacacaggttccttccaagatgcctctgtcatccagtgtgcatacaacctaaacttc
cctttgaggctgatccagtgctctcttgacactttgccctttagtgccttttccatcagc
accacagcagtcattcttgagactgttaaacaggcagaggacaggaagggggtgtttgtt
gttagactatacgagtcgcacggaagcagcgtgactgcaactctcagcacgacccttcaa
atcagggaagcctggcattgtgatcttttggagaaacaagaccccacccagccagcacat
ataacatcagatggaatcactctgaacttcagccccttccaaattgtgtcacttcttctt
attttttaa
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integrated database retrieval system
