Scomber scombrus (Atlantic mackerel): 133981557
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Entry
133981557 CDS
T10651
Name
(RefSeq) paired box protein Pax-6-like isoform X1
KO
K08031
paired box protein 6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133981557
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
133981557
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_23
Homeobox_KN
HTH_Tnp_IS1
DUF6115
Motif
Other DBs
NCBI-GeneID:
133981557
NCBI-ProteinID:
XP_062276298
LinkDB
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Position
6:complement(33346269..33377077)
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AA seq
432 aa
AA seq
DB search
MPQKDYRSQTSWETGVASMMQNSHSGVNQLGGVFVNGRPLPDTTRQKIVELAHSGARPCD
ISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPDVVGKIAHYKRECPSIFAWE
IRDRLLAEGVCTNDNIPSVSSINRVLRNLASDKQQMGTVGPEGMFDKLKMLNGQTSWGGR
SGWYAGTTLTTTECPQAEGGENTLSVNSNGEDSEETQMRLQLKRKLQRNRTSFTQDQIDA
LEKEFERTHYPDVFARERLANKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQVSNSSNH
IPISSSFNTSVYQPLPQPTTPVSFSSGSMLGRSDPVLSNSYSLPAMPSFSMAASLPMQAS
NQTSYSCMLPTSPTVNGRSYETYTPPHMQPHINSQSMTSATSSTGLISPGVSVPVQVPGS
EADMSQYWPRLQ
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaaaagattatagaagtcaaaccagctgggagaccggagtggcctccatgatg
caaaacagtcacagtggagtaaaccagctgggaggtgtgtttgtgaatggcagaccttta
cctgacacgaccaggcagaagatagtggagctggcacacagtggagctcgaccctgtgac
atatccagaatactacaggtgtctaatggctgtgtgagtaagatcttgggccggtattac
gagacaggttcgatccgtcctcgtgcaattggaggaagtaaacccagggttgctactcca
gatgtggtcggcaagatcgctcactacaagagagagtgtccgtccatctttgcctgggag
atcagagaccgactgctggcagagggagtctgcaccaatgacaacatacccagtgtttca
tcaataaatcgagtgctcaggaatttggccagtgacaaacagcaaatgggcacagtggga
cctgaagggatgtttgacaaactcaagatgctcaatggacaaactagctggggaggacgt
tcagggtggtatgctgggactacactcactaccactgagtgtccacaggcagaaggaggg
gagaacacattatcagtaaattccaatggtgaggattcagaggagactcagatgaggctt
cagctgaagaggaaactgcagagaaacagaacatcattcacacaggaccagatagacgca
ctggagaaagaatttgaaaggactcattatccagatgtgtttgcccgagaacgccttgca
aacaaaatagacctaccagaggcgaggatacaggtttggttttcaaacagaagagcaaag
tggagaagggaagagaagctgagaaatcaacgtcgtcaggtgtccaactcatccaaccat
attcccatcagcagcagcttcaacaccagtgtttaccagcctctaccacaacctactaca
ccagtgtccttttcatcaggatccatgttgggaaggtcagatccagttctgtctaacagc
tacagcctcccggccatgccaagcttcagtatggctgccagcttgcccatgcaagcatcc
aatcagacctcttattcctgcatgctgcccaccagcccaactgtaaatggaagaagttat
gagacatatacccctccacacatgcaaccacacatcaacagccagtcaatgacctctgca
acatcgtcaacaggtctgatttcccctggtgtctcagttccagtgcaagttccaggaagt
gaagcggacatgtcacagtactggccacgtctgcagtga
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