Scomber scombrus (Atlantic mackerel): 133981578
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Entry
133981578 CDS
T10651
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
133981578
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssco02000
]
133981578
Transporters [BR:
ssco02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
133981578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Sugar_tr
Motif
Other DBs
NCBI-GeneID:
133981578
NCBI-ProteinID:
XP_062276329
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Position
6:complement(22618308..22631966)
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AA seq
702 aa
AA seq
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MRKMDNTATGSWTADTNPPSSTVKNSCHPNLKMFLAALSFAYFAKALSGSYMKSTITQLE
RRFDIPSYMIGIIDGSFEIGNLLVIAFVSYFGAKLHRPKIIAIGCILMSFGTFLIAMPHF
IIGRYKIETSVRSSVNSTNNLSPCPTSSPESSRTGDRPSILPSRGCERESSVSMWIYVFL
GNVLRGIGETPVQPLGISYIDDYAQSENAALYIGCVQTISIIGPVFGYLLGSLCAKIYVD
IGYVDMETVTITPSDARWVGAWWLGYLIAGAITLMSAVPFWFLPKSLPMPVDKHDTSCTP
EQTRFIKDSPTMEHKFRPEEPANLHQMAKEFVPTLKSLLGNPVYVIYLCVTIIQFNSLIG
MVTYKPKYIEQHYGQSASKANFLMGMINIPAVALGMFSGGVVMKKYKLGVMGAAKFAFGT
SLLGYFLSLFFLAMSCDNATVAGITVSYTGVEGLSYQEQSLFSDCNSGCLCSRREWDPVC
GENGITYVSPCLAGCTSSTGSGRNTVFDNCRCVAMADTQPGNLTATLGQCQHRDSCDKIF
PYFLALSVLSSFIISLGGTPGFVLLIRCIKPELKSLALGIHTLATRTLAGIPAPIYFGAI
IDTTCLKWGYKMCGGRGACRIYNTSAYRIVYLGLTLGLRTVSFFLCILGFPLLKRHIKRE
EKAAMTNGSADLESLRKEEHSSIHCEQFILALDCNPNRETRL
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaatggacaacacagccacaggcagctggactgctgacactaaccctccctcc
tcaacagtgaagaactcctgccaccccaatctgaagatgttccttgctgccttgtccttt
gcctactttgccaaggctttgtctggcagctatatgaagagcacaattacacaactagaa
aggagatttgatatccccagctatatgatcggcatcatagacgggagctttgaaatagga
aacttgttggtgattgcctttgtgagttattttggtgccaagcttcaccgacccaagatc
atagcaattggatgtatcttgatgtcttttgggaccttcttgatcgccatgcctcatttc
atcattggccgctataagatcgaaacatcagttagatcttcagtgaattcaacaaataac
ctctctccatgtccaacaagctcacctgagtcctccaggacaggtgacagaccctctata
ctaccctctagaggctgtgagcgagagtccagtgtttctatgtggatctacgtgtttctg
ggaaatgttctgcgtgggattggagagactcctgtacaacctttgggaatctcctatatt
gatgattatgcacagtctgagaatgctgccctgtatatcggttgtgtccaaaccatatca
attattggtcctgtctttgggtacctgctggggtcgctgtgtgctaagatctatgttgac
attggttatgtggacatggagactgtgactattaccccttctgatgcccgctgggtggga
gcgtggtggctgggctacctcattgctggtgctatcaccctgatgtcagcagttcctttc
tggtttctgcccaaatcgctgcccatgccagttgataaacacgataccagctgcactcca
gagcagaccaggtttatcaaggattccccaaccatggagcacaaattcagacctgaggag
ccggctaatttacatcagatggccaaagaatttgtgcccacattgaagagtctccttggg
aatcctgtgtacgtcatctacttgtgcgtcaccatcattcagttcaactctctcattggc
atggtcacctacaagcccaaatacattgagcaacactatggtcagtcagcatcaaaagcc
aattttctcatgggaatgatcaacatcccggctgtggcccttgggatgttctctggagga
gttgtcatgaagaagtacaagctaggtgtcatgggagcagctaaatttgcctttgggacc
tctctgctgggctacttcctgtcgctctttttcttagccatgagctgtgacaatgccacg
gtggcaggcatcacagtttcatatactggagtggaaggcttgtcttaccaggagcaatcc
ctcttctccgactgtaattcaggttgcctgtgctcaaggagggagtgggatccagtgtgt
ggagagaacgggataacctacgtgtccccatgcttggctggatgcacctcctccactggc
tctggcagaaacacggtgtttgataattgcaggtgtgtagcgatggctgatacccaacca
ggcaacctaacagccacactgggccagtgtcaacacagggacagctgtgacaaaatcttt
ccatattttctggctctgtctgtcctcagttccttcatcatctcacttgggggtacacct
ggctttgtactgctcatcaggtgcatcaagcctgagctgaaatcccttgctcttggaatc
cacacgttggccactcgcactctggctgggataccggccccgatatactttggagctata
attgacacaacatgcctcaaatggggatacaagatgtgtggaggaagaggagcatgcaga
atatacaacacctcagcttacaggatagtgtacctgggcctgacactgggcctgaggaca
gtctctttctttctgtgtattttgggatttcctctactcaaaagacatattaagagggag
gagaaagctgccatgaccaatgggagtgcagatctggagtcactaaggaaagaggagcac
agctctatacactgtgagcagtttatactggccttggattgcaatcctaacagagagacg
cgcttgtga
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