Scomber scombrus (Atlantic mackerel): 133981625
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Entry
133981625 CDS
T10651
Symbol
arih1
Name
(RefSeq) E3 ubiquitin-protein ligase arih1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
133981625 (arih1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133981625 (arih1)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
133981625 (arih1)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
133981625 (arih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_14
zf-RING_5
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
133981625
NCBI-ProteinID:
XP_062276394
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All DBs
Position
6:19431742..19449822
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AA seq
529 aa
AA seq
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MDSDEGYNYEYDDEEEECSEDSAEEEPEDDTLELGEVELVDPVVAGGERDECGETGGGGH
GPGEEEEEDYRFEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFNWDKEKLMERY
FDGNLDKLFSECHVINPSKKPRIRPPINTRSSAQDMPCQICYLNFPNSYFTGLECGHKFC
MQCWGDYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITDSKVKLKYQHLITNSFVE
CNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLRKWIKKCD
DDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYN
CNRYNEDDAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQH
NMSWIEVQFLKKAVDVLCQCRSTLMFTYVFAFYLKKNNQSIIFENNQADLENATEVLSGY
LERDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggactcagacgagggttataactatgaatacgacgacgaagaagaggaatgtagcgag
gacagcgccgaagaggagcccgaggacgacaccctggagctcggagaggtggagttggtc
gatcccgtggtggccggtggggagcgagatgagtgcggcgagaccggcggaggtggtcac
ggtcctggcgaagaagaggaggaggactaccgtttcgaggttttgactgccgagcagatc
ctccagcatatggtggagtgcatcagggaggtcaacgaggtcatccagaatcctgcaaca
ataacacgcatccttctcagtcacttcaactgggataaagaaaaactaatggagaggtat
tttgatggtaacctggacaagcttttctctgagtgtcatgtcattaatcccagtaagaaa
cctcggatccgtccaccaatcaacacacgctcatccgcacaggacatgccgtgtcagatc
tgctatctgaacttccccaactcttattttaccggtctggagtgtggacacaagttctgc
atgcagtgttggggagattacctgaccaccaaaatcatagaagaaggaatgggacagacc
atttcttgccctgctcatagttgtgacattttggttgatgacaacacagtcatgcgcctc
ataacagattcaaaagtgaagttgaagtaccagcatttaattacgaatagttttgtagag
tgcaatcgactgttaaagtggtgccccgcaccagactgccatcatgttgtcaaagtccag
tacccagatgccaagccggtgaggtgcaagtgtggtcgtcagttctgcttcaactgcgga
gagaactggcatgatcccgtcaagtgtaagtggctgagaaaatggatcaagaaatgcgat
gatgacagtgaaacctcgaactggattgctgcaaataccaaggagtgtccaaaatgccat
gtgaccattgagaaagatggtggctgcaatcacatggtttgtcggaaccaaaactgcaaa
gctgagttctgctgggtctgcctgggaccatgggaacctcatggctcagcctggtacaac
tgcaatcgctacaatgaagatgatgccaaggcagccagagatgctcaagagcgctccagg
gcagccttgcagaggtacctgttctactgcaaccgctacatgaaccacatgcagagcctg
cgctttgagcacaagctctatgctcaggtcaagcagaagatggaggagatgcagcagcac
aacatgtcctggattgaggtgcagttcctgaagaaggctgtggatgtgctgtgccagtgc
cgctccacactcatgttcacttacgtctttgccttctacctcaagaagaacaaccagtcc
attatttttgagaacaaccaggcagacctggaaaatgccactgaggtgctgtctggctac
ctagagcgggacatctcccaggattccttgcaggacatcaagcagaaagtacaagataag
tacagatactgtgagagcaggcgaagagttctgctacagcacgtgcatgaaggctatgag
aaggacctgtgggagtacattgaggattga
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