Scomber scombrus (Atlantic mackerel): 133981627
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Entry
133981627 CDS
T10651
Symbol
chrna5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133981627 (chrna5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
133981627 (chrna5)
Ion channels [BR:
ssco04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
133981627 (chrna5)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
133981627
NCBI-ProteinID:
XP_062276399
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All DBs
Position
1:11708522..11713516
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AA seq
475 aa
AA seq
DB search
MMLRAGGAATSLALLLLLPLLCCCHLCHSLRIPKLSSYAKAEDKLFKYLFGNYQKWVRPV
EYLNQTICVKFGLAISQLVDVDEKNQQMTTNVWMKQEWNDMKLRWNPHDYLGITTIRVPS
DRIWLPDVVLYDNADGRFEGTVTKAVVKYDGTISWTPPANYKSACTIDVTFFPFDLQNCS
MKFGSWTYDGSQVDIILEEFHVDKQDYFDNGEWEIVKATGSRGLRTDSSSTYPTITYSFI
IRRLPLFYTLFLIIPCIGLSFLTILVFYLPSNGGEKISLCTSVLVSLTVFLLVIEEIIPS
SSKVIPLIGEYLVFTMIFVTLSIIITVFAINIHHRSSSTHHGMAPWVKKIFLHRLPKLLC
MRSHVDRYAAAGLARTGGAVGLGLRKDSPEFTPLHYTRHNLQAALDSIRYITMHVVKENE
VREVVQDWKFVAQVLDRMFLWAFLLVSILGSALLFIPVIYKWASIIVPNHTGSTL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgagagcaggaggggcagccacctctctcgcactgctgctgctgctgccgttg
ctgtgctgttgccacctgtgccactcattgcggattccaaaactctcatcctatgcaaaa
gcagaggacaagctgttcaaatacctctttggaaactaccagaaatgggttcgtccagtg
gaatacctaaaccaaactatctgtgtgaagtttggactggccatctcccagctagttgat
gtggatgaaaaaaaccagcaaatgacaaccaatgtgtggatgaaacaggagtggaatgat
atgaaactcagatggaacccgcatgactatctgggcatcacgactatacgagtcccctct
gacaggatctggcttcctgacgttgtgctgtatgataatgcagatggacgttttgagggt
actgtcaccaaggctgttgttaagtatgatggaacaatatcatggacaccgccagctaat
tacaaatcagcctgcaccattgatgtcaccttcttcccctttgacctccagaactgctca
atgaagtttggctcttggacctatgatggctcccaggtcgacatcattctcgaggagttc
cacgtggacaagcaggactattttgacaatggtgaatgggagatagtgaaggccacaggc
agccgtggtctgaggacagacagcagctccacctatcctaccatcacctactcctttatc
atccggaggttgcctcttttctacaccctcttcctcatcatcccttgcattggcctgtcc
tttctcaccatccttgtcttctatctgccctccaacggtggtgagaagatctctctctgt
acctcagtgctggtttcgctcaccgtcttcctcctggtcatagaggagatcatcccctcc
tcctctaaggttatccctctcattggggagtacctggtcttcaccatgatcttcgtcaca
ctctccatcatcattactgtctttgctatcaacatccaccaccgctcttcttctacacat
catggcatggcaccgtgggtgaagaagattttcctgcatcgactgccgaagctgctgtgc
atgcgcagccatgtggaccgctacgccgcagctggattggccagaacaggaggagcggtc
ggactgggtttgaggaaggactcacctgagttcacccctctccactacactcgacataac
ctacaagcagctttggattctatccgctacataaccatgcatgtggttaaagaaaatgag
gtcagagaggtggtacaggactggaagtttgtagcccaggttctggatcgaatgtttctg
tgggccttcctgttggtgtcaatcctgggctcggctctcctctttatcccagttatttac
aaatgggccagcatcatcgtccctaaccacactggaagcaccctctaa
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