Scomber scombrus (Atlantic mackerel): 133981629
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Entry
133981629 CDS
T10651
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133981629 (ctcf)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
133981629 (ctcf)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133981629
NCBI-ProteinID:
XP_062276398
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Position
6:31638211..31653604
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AA seq
828 aa
AA seq
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MEGGPAEGVGVVEVPAKDFPSIQAVHSQDAMVADLLQQAAEAGGVVEGQTGVVLEQGHGD
GMVAASQAQQLMEAGVGVDNGAGVEMMVMESLDPTLLQMKTEVIDAAVGGSSAGVGAAHQ
ATVTTVDQTQIITLQVVNMEEQAALGLGELQLVQVPVSATTVEALQQGTYVDTTAMPKDG
DPVICHTLPLPEGFQVVKVGANGEVETVEQEEGGEVHHEEEEEVGDQMMEEEEPIQPPND
DPTWPKDPDYQPPCGAIKRSKKGNKSRLRYAEGDKDMDVSVYDFEEEQQEGLLSEVNAEK
VVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFR
TVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVS
KLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKM
HILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCDAVFHERYALIQ
HQKSHKNEKRFKCDMCDYCCRQERHMVMHRRTHTGEKPYACSQCEKTFRQKQLLDMHFKR
YHDPNFVPTAFVCPKCSKTFTRRNTMARHAENCNGEVDDAENGTPPPKKGKRGRKKKMRS
RRDEEDSEEDNIEPDEEDEGDGEEEALLQEEDDPESMELDQAPAAIPVPAPDEPPVKRKR
GRPPKNAPKPPTPSKSVRVAAKTAASAAAIIQVEDESTGAVENIIVKKEEGDISAATPLE
QGVALTVEGVGLDGEGVETVELAVNEETAAAAANGDLTPEMILSMMDR
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggagggagggccagcagagggtgtaggggtggtggaggtccccgccaaagacttcccc
tccatccaggccgtccacagccaggacgctatggtggcagacctcctccagcaggctgca
gaggccgggggcgtggtggagggacagaccggagtggtcctggaacaaggtcacggggat
gggatggtagcagcgagccaggctcagcagctgatggaggctggggtgggtgtggacaat
ggagcaggggttgaaatgatggttatggagtcactggatcccacactgctgcagatgaag
actgaggtgatagatgctgcagtgggtgggtcatcagcaggagtgggtgctgctcaccaa
gctactgtaacaacagtggaccagactcaaatcatcacactacaagtggtaaacatggag
gagcaggccgctctgggcctgggggagctccagctggtccaggtgccagtttctgccacc
acagtggaggctctgcagcaaggcacctatgtagacaccactgctatgccaaaagatgga
gacccggtcatctgccacaccctgccgctgcctgagggctttcaggtagtgaaggtgggt
gctaatggagaggtggagacagtggagcaggaggagggaggagaagtccaccatgaggag
gaagaagaggtgggggatcagatgatggaagaggaggagcccattcagcccccgaatgat
gaccccacctggcccaaagacccagactatcagcctccatgtggagccatcaagaggtcc
aaaaagggtaataagagtcgtctgcgctacgctgaaggagataaggacatggacgtcagt
gtgtatgactttgaggaggagcagcaagagggtcttttgtctgaggtcaatgctgagaag
gtggtgggcaacatgaaaccacccaaacccaccaagatcaagaagaaaggagtgaagaag
acgttccagtgcgagctgtgcagctacacgtgcccccgccgctccaacctggacagacac
atgaagagccacactgacgaaagacctcacaagtgtcacctgtgtggacgagccttcagg
acggtcaccctgctcagaaaccatctcaacacacacactggaactcggccacacaagtgc
acagactgtgatatggccttcgtgaccagcggagagctcgttcgtcaccgtcgctacaaa
cacacacacgaaaaacccttcaaatgctccatgtgtgactacgccagtgtggaggtgagc
aaactaaagcgtcacattcgttcccacactggcgagcgtccattccagtgcagcctttgc
agctacgccagcagagacacgtacaagctgaagagacacatgaggacacactcgggagag
aaaccatacgagtgctacatctgccacgcccgcttcacccagagtggaaccatgaagatg
cacatcctgcagaaacacactgagaacgtggccaagttccactgtccacactgtgacact
gtcatcgcacgcaagagtgacttaggcgtccacctccgtaagcagcactcgtttatcgag
accggaaagaagtgccgttactgcgacgccgtgttccacgagcgatacgccctgatccag
catcagaagtcccacaagaacgagaagaggttcaaatgtgacatgtgtgactactgctgc
cgccaggagcgtcacatggtgatgcatcgtagaacccacactggagagaagccatacgcc
tgcagtcagtgtgagaagacgttcagacagaagcagctgctggacatgcacttcaaacgc
taccacgaccccaactttgtccccaccgccttcgtctgccccaagtgtagcaagaccttc
acacgcaggaacaccatggctcgccacgctgagaactgcaatggtgaagtggatgacgcc
gagaacggaaccccacccccgaagaaaggaaagagaggaagaaagaagaagatgaggagc
aggagagatgaagaggacagtgaggaagataacatcgaacccgacgaggaggatgagggt
gacggcgaggaggaagcactgttacaggaagaggacgatccagaaagcatggaactggac
caggcccccgccgccatcccagtaccagcccctgatgagccaccggtcaagaggaaacga
ggccgacccccaaagaacgcccccaaacccccaacacccagcaagtcagtcagagtggct
gctaagacagctgcttctgctgctgccataatccaggtggaggatgagagcacaggagcg
gttgagaacatcatcgtgaagaaagaggagggcgacatctcggcagccacgcctctggag
cagggagtggcactgacggtggagggggtggggctggacggggaaggggtggagactgtg
gagctggcggtgaacgaggagacggccgccgccgccgccaacggagacctgacaccagag
atgatcctcagcatgatggaccggtga
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