Scomber scombrus (Atlantic mackerel): 133981642
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Entry
133981642 CDS
T10651
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03022
Basal transcription factors
Brite
Transcription machinery [BR:
ssco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133981642
Coactivators
SAGA/TFTC/STAGA complex
133981642
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
133981642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133981642
NCBI-ProteinID:
XP_062276428
LinkDB
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Position
6:complement(4017894..4052125)
Genome browser
AA seq
1016 aa
AA seq
DB search
MAGASDLLEDMLFNEVDEKAVSDLVGSLESQLGDRKAPAASYSDVKREAAPAAATQLSGK
VRDQAASVEPQQGHPRAGLNPEPGAAEPLSGRALTSSTSSASSVAAGAVITTGASLHTVG
ATPPPTVSPVPGPVTLSSQPAAASFLRVAAGPSTTTTTTVPAASFLRAAPGPIITTTTAT
VPAAEVSSSSSPGLQSLNGNIGAVKLVNSPAVTPPAGANTVISAVSAGGSSIIASMASQP
TFPVPQSSVASPAAAVQRHPSPTTSVAHNGVDPKGGQLVTQCAPSPSSTSQVMNHSNPLM
HTKMLVSSQPVSGNSVILTSAPPSATVQTTISQTQTGTSPGQATVTLAAAGGGVKPAVNG
VGQPAVAVVRPLGTPVVATSIQQQRPGLVATTTRAAAPQPALAVRPQQQTTIQLPPGFTM
PPGMVLVRTETGQLVMVPQQVLAQAQAKTQQGQAVANIAQRPGTPTAGATIRVTTASPVT
TQTVRLASPAQTRMVQSPSPSTTVQKAITVAPGGTAVSVKMAPAQKAQTVITPGGTTVAK
PSTSPMTNTSPATTATPARVTVVSQEMQENVKKCKNFLATLIKLASHNSPSPDTSKNVKA
LVQDLLDAKIEPEEFTTRLQAELKSSPQPYLIPFLKKSLPALRQSLLSSQQSLTTVPPTT
SAPPLAAPGAVTTTAIRPRLPISPATSTVRLNAPLTNTTLAVGRAGVQTLQTRSPVVVSQ
TLRPQATLVRGPTTILGKTPIHLAAQANQKKLSDPGGGTFRDDDDINDVASMAGVNLNEE
NARILATSSELVGTKIRSCKDEAFLPPGLLQRRIMDTAKKLGVTEVPMEVVNFISHATQS
RLRTLLEKVSAVAQHRADGGKDEEHHEQTTDVRSQLRFFEQLERMEKQRKDEQEREMLLK
AAKSRARQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKLDSPGGSAA
GSEVASGSGSGSSPASSSRQQLRQRITRVNLRDFIFCLEQDRTTARSLMLYKALLK
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctccgacctactggaggacatgctcttcaatgaggtggacgaaaaggca
gtaagcgacttagttggctctctggaatcacaactcggcgacagaaaggctcccgctgct
tcgtattccgacgtgaaacgggaggcagctccggccgccgccactcagctctcagggaaa
gtgcgcgatcaagcggcgtctgtggagccgcaacaagggcatccgagagcggggttaaac
ccggagcccggcgccgcggagcctctctccggcagagcactcacctcctctacctcctct
gcctcctctgtcgccgccggggccgtgatcactaccggagcgagtctacacacagtggga
gcgactcctcctccgactgtctctccggtaccgggaccggtaactttgagctctcagccc
gccgctgctagcttcctccgggttgctgcgggtcccagcaccaccaccaccaccaccgtc
cccgctgctagcttcctccgggctgctccgggtcccatcatcaccaccaccaccgccacc
gtccccgctgcggaggtttcttcttcttcttctcccggattacaaagtttaaacggcaac
attggagccgtgaagttggtgaactcgcccgctgtcactcctccagccggggccaacact
gtaataagtgctgtcagtgccggcggctcctctattatcgcatccatggcttcacaacct
actttccctgtacctcagtcctcagtggcgtctcctgctgcagctgtgcagaggcacccc
agcccgacgaccagcgtcgcccacaacggggtggaccccaagggtggccagctggtgacc
caatgtgcaccttccccatcatccacgtctcaggtcatgaaccacagcaaccctctgatg
cacaccaagatgttggtgtcaagccaaccggtctctggaaactctgtcatcctgaccagc
gcccctccgtctgctacagtccagaccaccatcagccagactcagactgggaccagtcca
ggccaggctactgtcaccctggctgctgctggtggtggggtgaagcctgcggtcaacggg
gttggtcagcccgcggtggctgtggtgaggccgctcgggactcctgttgtggccacttcc
atccagcagcagagacccgggttggtggccactaccaccagagcggctgcccctcagccc
gcgctggcggtccggcctcagcagcagacgaccatccagcttcctcctggcttcaccatg
cctcctggtatggttctggtccggacggagacgggccagctggtgatggtgcctcagcag
gtcctggctcaggcgcaggccaagacgcagcaaggccaagcggtggccaacatcgcccag
agacccgggacaccgacggccggggccaccatccgggtcaccaccgccagtccggttacg
actcagaccgtccgcctggcttctcccgctcagaccagaatggttcagtctccatctccc
tccaccacagtacagaaggccatcacggtggctcccggcggcacagcggtgtcggtgaag
atggcgcccgctcagaaggctcagacggtgataacgccggggggcacgactgtggcgaag
ccgtccacctctccgatgaccaacacgtcgcccgctaccaccgccacgcccgccagagtg
acagtggtgtcccaggagatgcaagaaaacgtgaagaaatgcaagaactttctggctacg
ctcattaagctggcgtcccataactccccctccccagatacctccaagaatgtgaaggcc
ctggtgcaggacctactcgatgctaagattgagccggaggagttcaccactcggctgcag
gcggagctgaagtcgtctccacagccctacctcatccccttcctaaagaaaagcctcccc
gcccttcgtcagtctctcctcagcagccagcagtccttgacgacggtcccccccaccacc
tccgcgccccctctggcagcccccggcgccgtcaccaccaccgccatccgaccgcggctg
ccaatcagtcccgccaccagcaccgtccgactgaacgcgccgctcacaaacacaactctg
gctgtgggcagagcaggagtgcagactttgcagactcgttcacctgttgtcgtcagtcag
actctcagaccgcaagctacgctagtaagagggcccaccaccatactgggtaaaactcct
attcacctggcagcgcaggccaatcagaagaaactgagtgacccagggggcgggactttc
agagatgacgacgacatcaacgacgtggcgtccatggccggcgtcaacctcaacgaggag
aacgcccgtatcctagcgaccagctcggagctcgtcggcaccaagatccgctcctgtaag
gacgaggcgttcctgccaccgggcctgctgcaacgccgcatcatggacacagctaagaag
ctcggtgtgaccgaggtgccgatggaagtggtgaacttcatctctcacgccacccagtcc
agactccgcacgctgctggagaaggtttcagcggtcgctcaacaccgcgcagacggcgga
aaggatgaagagcatcacgaacagacgacagacgttcgctctcagctgcgtttcttcgag
cagttggagcggatggagaaacagaggaaagacgagcaagagagagagatgctgctgaag
gctgccaagagtcgcgccaggcaagaagatcctgagcaggctcgtctgaagcagaaggcg
aaagagatgcagcagcaggagttggctcagatgcggcaacgagacgccaacctcacggcg
ctcgctgccatcggaccacgaaagaaacgcaagctggactcgccgggtggctcagcggcc
ggctcagaggtggcttcgggctcgggctcaggctcgtctcccgcctcttcctcccgccag
cagctccgtcagcggatcacgagagtgaacctcagggacttcatcttctgtctggagcag
gaccgcaccacagcgcgctcgctaatgctctacaaggcgctactcaaataa
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