Scomber scombrus (Atlantic mackerel): 133981663
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Entry
133981663 CDS
T10651
Symbol
si:ch211-59o9.10
Name
(RefSeq) uncharacterized protein si:ch211-59o9.10
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133981663 (si:ch211-59o9.10)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133981663 (si:ch211-59o9.10)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133981663 (si:ch211-59o9.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
PFF1_TM
FANCL_C
Motif
Other DBs
NCBI-GeneID:
133981663
NCBI-ProteinID:
XP_062276457
LinkDB
All DBs
Position
6:474706..479818
Genome browser
AA seq
397 aa
AA seq
DB search
MDQLLSGGSSEPDSPGGLNRGYLLDTSEVLYQDLSVIVPETPSPQLGRRRRRSHVTEEHL
RPVSCQQVSASPEPDRLFPRKRRRLAAEHSFVPASSLAVFPLSSWLEAPLSSSCSSSSSC
SSSSSSYLTPGSQQEVEAVASSSGESGSGCFSQKRRQTSPPPPASPPASPPASSSLSFLT
EEERRWLSGEQGKTSAAADQIVISDDDEAAVRSAQEEEDEAFARSLQAQFDEEQRETPLH
HHHQHHHHHHHHHQSQHTYQAYSWMPDLLAAVAPLVDHDLIGPNRRRGRGRRRNGLPDLS
DDVQGNDYEALLDFEQRQGSVVNRKLTRRQIQRFPTKSFLSASSAGNTQCQICFCDYTDG
EKLRMLPCFHDYHVKCIDRWLKDNTTCPICRADLADL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggaccagctgctctcaggaggctcctcagagcccgacagtccaggaggtctgaaccga
ggctacctgctcgacaccagcgaggtcctgtaccaggacctgtctgtcatcgtcccggaa
acacccagtcctcagctcggcaggcggaggagacgcagtcatgtgacggaggagcatctc
agaccggtttcctgtcagcaggtctcggcctcgcctgaacccgaccggctgtttccacgg
aaacggcggcggctggcagcagagcacagcttcgttcctgcttcatcgctcgctgtgttt
cctctgagcagctggctggaggctccgctctcctcctcctgctcctcctcctcctcctgc
tcctcctcttcctcctcctacctcacacctggatcacagcaggaagtggaggctgtggcg
agctcctcaggagaatctggctctggttgtttcagccagaagaggcgtcagacatctcct
cctcctcctgcgtctcctcctgcgtctcctcctgcctcgagctctctgtccttcctcact
gaggaggagaggaggtggctcagcggcgagcagggaaaaacgtcagcagcagccgatcag
atcgtcatcagtgacgatgacgaggccgccgtccgctcggctcaggaggaagaagacgag
gcgttcgctcggagtctgcaggctcaatttgatgaagagcagagagagactccccttcat
catcatcatcaacatcatcatcatcatcatcatcatcatcagagccaacacacgtatcag
gcgtacagctggatgcccgacctgctggctgccgtcgctccgctggtcgatcacgatctg
attggtccaaacaggcggcgtgggcggggccggaggaggaacggcctccccgacctatca
gacgacgtccagggaaacgactacgaggctctgctggactttgagcagcgtcagggttct
gtagtaaacaggaagttaactcgcagacagattcagagatttcccaccaagagcttcctg
tcagccagcagcgccggaaacacacagtgtcagatctgtttctgtgattacactgatgga
gagaagctgaggatgttgccctgtttccatgactaccacgtaaagtgtatagaccgatgg
ttgaaggataacaccacctgtccgatctgcagagctgacctggctgacctctga
DBGET
integrated database retrieval system
