KEGG   Scomber scombrus (Atlantic mackerel): 133981686
Entry
133981686         CDS       T10651                                 
Symbol
lsm14aa
Name
(RefSeq) LOW QUALITY PROTEIN: LSM14A mRNA processing body assembly factor a
  KO
K18749  protein LSM14
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssco03019]
    133981686 (lsm14aa)
Messenger RNA biogenesis [BR:ssco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     133981686 (lsm14aa)
SSDB
Motif
Pfam: LSM14 SM-ATX FDF
Other DBs
NCBI-GeneID: 133981686
NCBI-ProteinID: XP_062276489
LinkDB
Position
6:4053327..4071906
AA seq 530 aa
MSGGTPYLGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDD
TFEYIIFRGSDIKDLTVCEPPKPTCSLPQDPAIVQGAVSPPPAWLXFCRSYGLFNRAPVP
AYNQSAPAXLVSPQFGPVGVGRSVPSFVSNTSSAVAQAQRSAVGSARPSDSSFLGNLVTE
GRSSPSLDPLRKSPSLEQVIQSASAPSAPAAASAPTVPAPGLGRRSPAHARTAPSAGQSI
QKTHHHHHHQLQQQDGMDTRRGEPVRGGRGSSQGWPAPRTISASHISAVDRASTAGLTHS
IFSHSAPGAPGNRRGRGGGHRGRGRFNVRRDGPMKFEKDFDFESANAQFNKEEIDREFQS
KLKLKDEKTEKTEKPEKAVNGEDKGDSGVETQNSENNAEEGEGGGDPLGPNCYYDKSKSF
FDNISCDDTRKALDKSGITGFPRERRQTWAEERRMNAETFGIPLRQGRGRGGYRGRGGMG
FRGGRGRSASRGSFGPPQGGGGFRGGYRGNQAGREFADLSAYRKDNKVAA
NT seq 1593 nt   +upstreamnt  +downstreamnt
atgagtggcgggacaccttacctcgggagcaaaatcagcctcatctcgaaggccgagatc
cgctatgaggggatcctgtacaccatcgacaccgagaactccaccgtcgcacttgctaaa
gtacgttcctttggtacggaggaccgccccaccgacaggcccatcccgccccgagatgac
accttcgagtacatcatcttcagaggcagcgacatcaaggacctgactgtgtgcgagccc
ccaaaaccaacatgctctctccctcaggaccccgccattgtccagggtgcagtctcacct
ccgcctgcatggttgtaattctgccgctcctacggcctcttcaaccgcgctccggttcct
gcctacaaccagtcagcaccagccnccctggtgtccccccagtttggacccgttggtgtc
ggacgatcagtgccctcctttgtgagcaacacgagctcagccgtagcccaggctcagaga
agcgctgttggctctgctcggccctctgactcgagctttctgggtaatcttgtaactgaa
ggccgcagcagccccagcctggaccctctgcgaaagagcccctcgctggagcaggtgatc
caatcggcgtccgctccgtcggcccccgccgccgcctccgcccccacggttccggcccca
ggactcggacgcaggagcccggctcacgcccgcaccgctccctccgccggccagagcatc
cagaagacccaccaccaccaccaccaccagctgcagcagcaggacggcatggacacaagg
aggggtgagcctgtcaggggaggccgaggcagcagccagggctggcctgcaccccgaacc
atctcagcctctcacatcagtgcagtagatagggcttccactgcagggcttacccactct
atctttagccactcagctccaggcgcacccggtaaccggcgcggtcgaggcggcggacac
cgcgggcgaggacgcttcaacgtacgccgagacggacccatgaagtttgagaaggacttt
gacttcgagagcgccaacgcccagttcaacaaggaggagatcgacagagagtttcagagc
aagctgaagttgaaagatgagaagactgagaagaccgagaagccggagaaagcggtgaac
ggagaggataaaggcgactccggtgtcgagactcagaacagcgagaacaacgcagaagaa
ggagaaggggggggcgacccgctcggcccgaactgctactatgacaagtccaagtccttc
ttcgacaacatctcctgtgacgacaccaggaaagcacttgacaagtctggaatcacaggg
ttcccaagggagcggaggcagacctgggcagaggagaggcggatgaatgccgagacattc
ggcatccctctgcgtcagggtcggggccgcggaggttaccgtggacgtggtggtatgggc
ttccgtgggggtcggggtcgttcggctagccgaggatccttcggtccaccgcaaggaggc
ggaggcttcaggggaggatacagaggaaaccaggccggacgagaattcgccgacttatca
gcatacaggaaggacaacaaagtggcagcatag

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