KEGG   Scomber scombrus (Atlantic mackerel): 133981703
Entry
133981703         CDS       T10651                                 
Symbol
hexa
Name
(RefSeq) LOW QUALITY PROTEIN: beta-hexosaminidase subunit alpha
  KO
K12373  hexosaminidase [EC:3.2.1.52]
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco00511  Other glycan degradation
ssco00513  Various types of N-glycan biosynthesis
ssco00520  Amino sugar and nucleotide sugar metabolism
ssco00531  Glycosaminoglycan degradation
ssco00600  Sphingolipid metabolism
ssco00603  Glycosphingolipid biosynthesis - globo and isoglobo series
ssco00604  Glycosphingolipid biosynthesis - ganglio series
ssco01100  Metabolic pathways
ssco04142  Lysosome
Module
ssco_M00079  Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09100 Metabolism
  09103 Lipid metabolism
   00600 Sphingolipid metabolism
    133981703 (hexa)
  09107 Glycan biosynthesis and metabolism
   00520 Amino sugar and nucleotide sugar metabolism
    133981703 (hexa)
   00513 Various types of N-glycan biosynthesis
    133981703 (hexa)
   00531 Glycosaminoglycan degradation
    133981703 (hexa)
   00603 Glycosphingolipid biosynthesis - globo and isoglobo series
    133981703 (hexa)
   00604 Glycosphingolipid biosynthesis - ganglio series
    133981703 (hexa)
   00511 Other glycan degradation
    133981703 (hexa)
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    133981703 (hexa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ssco03110]
    133981703 (hexa)
Enzymes [BR:ssco01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.52  beta-N-acetylhexosaminidase
     133981703 (hexa)
Chaperones and folding catalysts [BR:ssco03110]
 Intramolecular chaperones
  Others
   133981703 (hexa)
SSDB
Motif
Pfam: Glyco_hydro_20 Glycohydro_20b2 Glyco_hydro_20b
Other DBs
NCBI-GeneID: 133981703
NCBI-ProteinID: XP_062276511
LinkDB
Position
6:complement(19423499..19431004)
AA seq 503 aa
MWPLPQTFTSSTERYPLNPQTFYFGYGGQSAAQQGCSVLDAAFKRYFSLIFPDYISGSVV
LRFNEDKLFTLEITVDHNDCDSYPNEDSSEKYNMNVSARHASLHAETVWGALRGLETFSQ
LVYQDDFGAYFINRTEIEDFPRFPFRGILLDTSRHYLPVQAILKTLDAMAYSKFNVFHWH
IVDDPSFPYQSRTFPDLSSKGAFHPMTHVYTQSDVRRVISYARLRGIRVLPEFDTPGHTK
SWGKGQPDLLTPCYKGGIPSGTFGPVNPVLPSTYRFMAGLFKEVSSVFPDSYIHLGGDEV
DFSCWRSNPDIRAFMKKMGFGDFTKLEAFYIENIVNITNALKKTSIVWQDVFDYHERIPK
DTMLHIWKGTSATYKXFSRITKAGLGVLWAAPWYISHISYGQNWCNYYTVQPKNFSGTEE
QKKLVIGGEVCMWGEYVDSTNLNQRLWPRASAAAERLWSDEKETSNVEKALPRLQDFRCK
LLRRGIQAEPLYIGYCRHEYQGV
NT seq 1512 nt   +upstreamnt  +downstreamnt
atgtggccattaccgcagactttcacttcatcaacggagcgataccctctgaacccccaa
actttctactttggttatggaggtcaatcagctgcacagcagggctgctctgttctggat
gctgcattcaagagatatttttctcttatttttccagactacatttctggtagtgttgtt
cttcgattcaatgaggataaactatttacgttggagatcactgtggaccataatgattgt
gacagttacccaaatgaagactcttctgagaaatacaatatgaatgtctctgcaagacat
gcatccctgcatgcagaaactgtgtggggtgctttaagaggtctggaaaccttcagtcag
ctggtataccaagatgattttggtgcatactttattaacaggactgagattgaggacttc
cccaggtttccgttcaggggaattttgttggacacttcacgtcactatctaccagtgcaa
gccatcctaaaaactctggatgcaatggcctacagtaaattcaatgtgtttcattggcac
attgttgatgacccctccttcccataccaaagccgtacctttccagacctcagcagtaag
ggggctttccatccgatgactcatgtctacacacagtcagatgtgagaagggtgatctca
tatgccaggctgcggggaataagggtccttcctgagtttgatacacccggccataccaaa
tcttggggaaaaggacagcctgacctgttgactccctgctacaaaggggggatcccatcg
ggtacttttggtcctgttaatccagtgttaccctccacctaccggttcatggcaggacta
tttaaggaagtgtcatcagtgtttcctgattcctatatccacttaggaggggatgaggtt
gacttctcctgttggagatccaacccagatatccgggcattcatgaagaagatggggttt
ggagacttcaccaaactggaagcattctacattgagaacattgtgaatatcactaacgct
ctcaaaaagacatccattgtgtggcaggatgtatttgactaccatgagcgaattcctaag
gacacaatgctgcacatctggaagggcacctcagctacttataagnngttcagcaggatc
accaaagctgggttgggggtcctctgggcagccccttggtacatcagccacatttcctat
ggccagaactggtgcaactactacactgtgcagccaaagaacttttctggtactgaggaa
caaaagaagttggtgatagggggtgaggtctgcatgtggggggaatatgttgattccacc
aatctcaatcaacgtctatggccaagggcaagtgctgctgcagagagactttggagtgat
gagaaagagacctccaatgtggaaaaagcattgcctcgtttgcaggattttcgttgcaaa
ctgctgaggcgtggcatccaggcagagcctctctatattggatactgcagacatgagtac
cagggtgtttga

DBGET integrated database retrieval system