Scomber scombrus (Atlantic mackerel): 133981705
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Entry
133981705 CDS
T10651
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93
KO
K14309
nuclear pore complex protein Nup93
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133981705 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133981705 (nup93)
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133981705 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
133981705
NCBI-ProteinID:
XP_062276513
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All DBs
Position
6:25185019..25219212
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AA seq
820 aa
AA seq
DB search
MDAEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDAADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDVEPSFVSEVTAPGRSALDS
VEVAYGRQIYIFNEKIVNGHIHPNLGDLCASVAESLDDKNVSDMWLMVKQMTDVLLVPAK
DTLKSRASVEMQMAFVRQGLSFLENSYKNYTMVTVFGNLHQAHLGGVPGTYQLVRSFLNI
KLPGPLPGMQDGEIEGHPVWAVIYYCLRCGDLNAAMQVVNRVQHQLGDFKTWFQEYMNSP
DRRLSPTSENKLRLHYRRVLRNSADPYKRAVYCLIGKCDISDNHGEVADKTEDYLWLKLN
QVCFDDDGSSSPQDRLTLPQLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAVAFL
FRVERLRSHAVHVALVLYELRLLLKSSGQSAQLLSQEPGDPPTVRRLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAIISKVALEAENKGLFEEAVRLYELAKNPDKVLELMNRLLSPVIAQVSAPQSN
KERLKNTAVAIAERYRSQGVAGEKSVNSTFYLLLDLMTFFDEYHGGHVDRAYDVMERLKL
LPLSQESVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQYKRLKGVPAGTPGRPQRTIE
DRDMQLRSQARALITFAGMIPYNMAGDTNARLVQMELLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagagggttttggggagcttctgcagcaggctgagcagctagccgcagagaca
gaggcagtgtcagagctgccacacgttgagaggaaccttcaggagatccaacaggcggga
gagagacttcgatctcgtaccctgacccgtacctcgcaagatgctgccgacgtaaaagcg
tcaatcctcctcggttccagaggtttagacatcttccacatttctcagaggttggaaagt
ctaagcgctgccaccacctttgagcccctggagccggtcaaagacacagacatacagggc
ttcttgaagaacgagagggacaacgctctcctgtcagccatcgaggaatcacgccgcagg
acgttcctgttggctgaagagtaccatcgtgagtccatgctggtccagtgggagcaggtg
aagcagagagtgctgcacacactgctcggagcaggagaggacgctctggacttcagtcaa
gacgtggagccgagctttgtgagtgaagtgaccgctccaggaaggagtgccctcgacagc
gtggaggtggcctacggacgacagatctatattttcaatgagaagatagtgaatggacac
attcaccccaatctaggagacttatgtgcttcagtagcagaaagcctggatgacaagaat
gtatcagacatgtggctgatggtgaagcagatgacagatgttttgctggttccagccaaa
gacaccctcaagagtcgcgcttctgtggaaatgcagatggcctttgtgcgtcaggggctc
agcttccttgagaacagttataaaaactacaccatggtgaccgtgtttggaaacctccat
caggcccatctaggaggggtgccgggaacgtaccaactagtccgcagcttcctcaacatt
aaactaccagggcccctgcctggcatgcaggacggcgagatagagggccacccagtatgg
gctgtgatctattactgccttcgctgtggagacctgaacgcagccatgcaggtggtgaac
agagtgcagcaccagcttggagacttcaaaacctggtttcaggagtacatgaacagcccc
gacagacgcctctccccaacttcagagaacaaacttcgtctccactaccgcagagtgctg
aggaacagcgccgacccctacaagagagccgtctactgcctgatcgggaaatgtgacatc
agtgataatcacggagaggtggcagacaagactgaagactacctttggcttaagttgaac
caggtgtgttttgatgatgacggcagcagctctcctcaggacagactgaccctgccacag
ctacagaaacagctgttggaggactatggagagtctcatttctcagcgagccagcagccc
ttcctgtatttccaggtgttgttcctgacggctcagtttgaagcagccgtggctttcttg
tttcgtgtggaaagactgcggagtcacgccgtgcacgtggcgctggtcctgtacgagcta
cggctgttgttgaagtcttccggtcaaagtgctcagctgctgagtcaagagccaggtgac
cctccaacggtgcgtcgcctcaactttatccgtctgctcatgctctacactcgcaagttt
gagtccaccgatccacgagaagccctgcagtacttctacttcttacggaatgaaaaggac
agccagggagagaacatgttcatgcgttgcgtcagtgaactcgtcatcgagagccgagag
tttgacatgttgttggggagattagagaaggacggcagcaggaagcctggagtcatagat
aagtttgccggggacaccagagccatcatcagtaaagtggctctagaggctgagaacaag
ggtttgtttgaggaagcagtcagactctacgagctggccaagaacccagataaggtgttg
gagctgatgaacaggttgttgagtccggtcattgctcaggtcagcgctcctcagtccaac
aaggagaggctaaaaaacacagctgtggccatcgctgagaggtatcgttctcagggtgta
gcaggagagaagtccgtcaatagtacgttctacttgctgttagacctgatgacgttcttt
gacgagtaccacggcggtcacgtggacagagcctacgatgtgatggagcgtctgaagctt
cttcctctcagtcaggagagcgtggaggagagagtggctgccttcaggaacttcagcgat
gaggtacgtcacaacctgtcagaggtgctgctggccaccatgaacatcctgttcacccag
tacaagcgcctgaagggggtgccagcaggaacgccaggacggccacagaggaccatagag
gacagagatatgcaactgcgcagccaggccagagccctgatcacctttgctggtatgatt
ccctacaacatggccggagacacaaacgcaagactggtgcagatggagttactgatgaac
tga
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