Scomber scombrus (Atlantic mackerel): 133981714
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Entry
133981714 CDS
T10651
Symbol
rbm28
Name
(RefSeq) RNA-binding protein 28
KO
K14573
nucleolar protein 4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133981714 (rbm28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssco03009
]
133981714 (rbm28)
Ribosome biogenesis [BR:
ssco03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
133981714 (rbm28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_7
RRM_occluded
RRM_11
BUD22
Motif
Other DBs
NCBI-GeneID:
133981714
NCBI-ProteinID:
XP_062276526
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All DBs
Position
6:15912928..15921241
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AA seq
788 aa
AA seq
DB search
MPAQTLFVGSLPASATNERLEEIFSEIGPLKQCFVVREKGTEKCRGFGYVTYSMEEDAQR
AMKEVKEYDGKKLSVTVAKKKIKDKKKPARKEPEPEPASESTSAPPPAPVPAPAPAPSGS
EQKSKGLRKNCLRARLIIRNLSFKCSEEDLKQVFAKFGTVLESKIPLKPDGKMRGFAFVQ
LKNVAEAARALKAMNLKEIKGRQVAVDWAVPKDKFVAMNLTASTGNKKTEEAAAKQSDTK
SNSEDEDEEKNQAAPEKKVSSKAAVKQAEESQSDDEEEQDSEEEEEDDDDDDASQEGGDD
DDKSSLGSHNDQDDSEDEDEEDDDDDDDDDDDEEDESAKKKASRKLLPSDVNEGRTLFIR
NLSFDTEEEGLEEVLLRYGELNYVKIVVHPDTEHSKGCAFAQFKTKEAADKCMAAAQDEA
ENGGIRVDGRKLLIAVAVTREDAAKLKDNKVKVETGTRNIYLAREGLIRAGTKSAEGVSE
ADMMKRTRFEEVKRAKLRDIKVFVSKTRLCVHNLPKSVDNKKLKALCLQAVKGGKGVRIT
ECRVMYDKKPERGQVMGQSLGYGFVQFQDHEHALSTLRYLNNNPDIFSSHKRPIVEFSLE
DTRKLKIKEMRHQKNKEFLRRPPLKGGPKPQSQTSGDGKGSNKSGNKTQLSTQLTGERAP
HQNQRQKRHAGFQTKPEVEHVDLENGKKRKKILPFPSHKGPKIRMRDKGKQQPPPPKKAR
PGSSRRERQKQQMEKPTQPRNQKVKPAKKHFRSRDGDRFDKLVEQYKKKLTGNSNTNNAI
KRNKWFDS
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgccagcacagaccctgttcgtcggttctcttccagcttcggctacaaatgaacgactt
gaagagatattctctgagattggccctttaaagcaatgcttcgtggtcagagagaaaggc
acagaaaaatgtcggggatttggctacgtcacatactccatggaggaagatgcccagcga
gctatgaaagaagtaaaagaatacgacggaaagaagctttctgtgacagtggcaaagaag
aaaataaaagacaaaaagaagccagcacggaaagagccagagccagagccagcatcagaa
tcaacatcagcgccgccaccagcaccagtaccagcaccagcaccagcaccaagtggaagt
gagcagaaatccaaaggcctcaggaaaaactgtctgagagcaagactcatcataaggaat
ctcagttttaagtgctcagaggaagatctgaagcaggtttttgccaagtttggaacagtt
cttgagtccaaaatccccctcaaacctgatggtaagatgcgcggatttgcgtttgtccaa
ttgaaaaatgtggctgaggcagcaagagcgcttaaagccatgaacctgaaggagatcaaa
ggtcggcaggtagcagttgactgggctgtaccaaaggataagtttgttgccatgaatcta
actgccagtacaggaaataagaagacagaggaagcagctgcaaaacagtcagacacaaag
agcaactctgaagatgaggatgaagaaaagaaccaagcagctcctgagaagaaggtcagt
tcaaaagcagctgtgaagcaggcagaggaatcacaatcagatgatgaagaagaacaagac
agtgaggaggaggaggaggatgatgacgatgatgatgcgtcccaggagggaggagacgat
gacgacaagagtagccttggttcacataatgatcaagacgatagtgaggatgaagatgag
gaggatgatgatgatgatgatgatgatgatgatgatgaagaagatgaatcagctaaaaag
aaagcctcaaggaaacttctcccttcagacgtgaacgagggcagaacacttttcatcagg
aatctgtcctttgatacggaggaagaaggccttgaggaagttcttctacggtatggagaa
cttaactacgtaaagattgttgtccaccctgatacagaacattcaaaaggttgtgcattt
gctcagtttaagacaaaagaggccgcagacaaatgcatggctgcagcgcaggatgaagca
gagaacggaggcatccgtgtagatggtagaaagctgttgattgcggtggcagtgaccaga
gaggatgctgctaagctgaaggacaacaaagtgaaagtagaaacgggcaccaggaacatt
tacctggccagagagggattgatccgtgctgggacaaaatctgcagagggtgtgtctgaa
gcagacatgatgaagagaaccagatttgaagaagtaaaaagggcaaagcttcgggacatt
aaagtttttgtgtctaagactcgtctgtgtgtccataacctgcccaagtcagtggacaat
aaaaagctcaaagcgctctgccttcaagctgtaaaaggaggcaagggagtccgcatcaca
gagtgtagggtcatgtatgacaagaagccagagagaggtcaagtgatgggacaatcactt
ggttatggctttgtccagttccaggaccacgaacatgctctcagtacgcttcgttacctc
aacaacaaccccgacatctttagctcacacaagagacctattgttgagttctccctggag
gacactaggaaactcaaaataaaagaaatgcgacatcaaaaaaacaaggagtttttaaga
agaccgcctctaaaaggtggaccgaaacctcagtcccagacatccggagatggaaaagga
tctaacaaaagtggaaataaaacacaattgtcaacacagctgacaggagagcgagctcct
catcaaaaccagaggcaaaagagacatgccggcttccagaccaaacctgaggtggagcac
gtagatttggagaatggaaagaaaaggaagaaaattctacctttcccctcacacaaagga
cctaagatcagaatgcgtgataaaggaaaacagcagcccccacctcccaagaaagcacgg
cctggatccagcaggagggagcgtcaaaaacagcagatggaaaaacctacacaacccaga
aaccagaaggtcaaaccagcaaagaagcatttcaggagcagggacggggaccgttttgac
aagctggtggagcagtacaagaagaaactgactggtaacagtaacacgaacaatgccatc
aaaagaaacaagtggtttgatagttaa
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