Scomber scombrus (Atlantic mackerel): 133981755
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Entry
133981755 CDS
T10651
Symbol
nob1
Name
(RefSeq) RNA-binding protein NOB1 isoform X1
KO
K11883
RNA-binding protein NOB1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133981755 (nob1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssco03009
]
133981755 (nob1)
03051 Proteasome [BR:
ssco03051
]
133981755 (nob1)
Ribosome biogenesis [BR:
ssco03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
133981755 (nob1)
Proteasome [BR:
ssco03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
133981755 (nob1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
WRNPLPNID
Zn_ribbon_NOB1
RNA_pol_3_Rpc31
DZR_2
HypA
Zn_ribbon_15
DUF7129
Zn_ribbon_8
DZR
Zn_Ribbon_1
LAP1_N
Motif
Other DBs
NCBI-GeneID:
133981755
NCBI-ProteinID:
XP_062276621
LinkDB
All DBs
Position
1:complement(37470011..37482100)
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AA seq
479 aa
AA seq
DB search
MAAALVEHVVADAGAFLKKAPLQEIGRNIYTLKDVVDEIRDKPTRKSLAFLPYQLTFKEP
HPEHIRLVTEFSKKTGDYPSLSATDIKVMALTYQLQLEQVGPQNLRKEPEVKVNIQSTRR
HPETPVNVAGFHFPSKKPADGPHDRQSQTETRNSVENEEFNSFQFWRAPLLCMDEELMDL
LDPVKVLNSKNKKKQTKAKTSSVAADSEEFNSFQFWRAPLPSIDDELLEFLKDASEGAGH
KDSEDQSDGEDKENELEEEEEEGEEEDDDDDGGGWITPSNIKQVKMDTADWTAPADVRVG
CLTTDFAMQNVLIQIGLHVLSVNGMLIKQARNYILRCHACFKTTSNMTKQFCPHCGNQTL
KKIAVTLSEDGSMHMHFSKNPKVLNHRGMRHTLSLPQGGKHSNNPQLVEDQRFPQQRLSR
KARQKTDVFNPDYVAGGSPFCENDIYSRAANLNIRDGQSGGGKRRANPNANRNKFVKKK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccctggtggagcatgttgtcgcagatgctggagcgtttctaaagaaagct
cctctgcaggaaatcggcagaaacatttatacgctgaaagatgtggtcgacgagatcaga
gacaaaccgaccaggaagagtctggccttcctgccgtaccagctcaccttcaaagaaccg
catccggaacacatcaggctggtcacagagttctctaagaagacgggagactacccgagt
ctgtccgccactgacatcaaagtcatggctctgacctatcagctgcagctggagcaagtc
ggcccccaaaacctgaggaaagagccggaggtcaaggtgaatattcagagcacacgacga
catccagagactccggttaacgtggcaggattccactttccctccaagaaaccagccgac
ggtccacacgaccgacagtcacaaacagagacgcggaactcggttgaaaacgaagagttt
aacagcttccagttctggagagcgccgctgctgtgcatggacgaggagctgatggattta
ctggatccagtcaaggttttgaattcaaagaacaaaaagaaacagacgaaagcaaagacg
tcttctgtggcggccgacagcgaagagtttaacagcttccagttctggagagcgccgctg
ccgtccatcgacgacgagctgctggaatttctgaaagacgcctccgagggggcgggtcac
aaggactcagaggaccaatcagacggcgaggacaaagagaacgagcttgaagaggaagag
gaggaaggggaggaggaagatgatgatgatgatggaggcggttggatcactcccagtaac
atcaaacaggtgaagatggacacggctgattggacagctcccgctgatgtcagagtcgga
tgtctgaccactgacttcgccatgcagaacgttctgattcagatcggacttcacgttctg
tccgttaacgggatgctgatcaaacaggccagaaactacatcctgcgatgtcacgcctgc
ttcaagacgacgagcaacatgaccaaacagttctgtcctcactgcggcaaccagacgctg
aagaagatcgcagtgacgctcagcgaggacggcagcatgcacatgcacttctccaaaaac
cccaaagtgctgaatcacagaggaatgaggcacacgctgtctcttcctcagggagggaag
cacagtaacaaccctcagctggtggaggatcagcgtttccctcagcagagactttcccgt
aaagctcgtcagaagaccgacgtctttaaccccgactacgtggccggaggttcgccgttc
tgcgagaacgacatctacagccgcgccgccaacctcaacatcagagacggtcagagtgga
ggcgggaagagacgagccaaccccaacgccaaccgaaacaagtttgtcaaaaagaagtga
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