Scomber scombrus (Atlantic mackerel): 133981809
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Entry
133981809 CDS
T10651
Symbol
cdhr5b
Name
(RefSeq) cadherin-related family member 5
KO
K16505
cadherin-related family member 5
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssco04515
]
133981809 (cdhr5b)
Cell adhesion molecules [BR:
ssco04515
]
Cadherins
Cadherin related
133981809 (cdhr5b)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
133981809
NCBI-ProteinID:
XP_062276647
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All DBs
Position
6:542865..552988
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AA seq
802 aa
AA seq
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MDGIHPPFTVRTSISFLLLILLQTSADAQSICSAPQIVNFDENNAVGAVVLDITVLPGVT
LTFKTPENPDTDNPFELNGNQLIAKRSLDYETQRTFTVNINCLQADTSFPLVFVVVLQNL
NDNAPQFAENPYNVNFNEMSPVGTTVGRFAATDLDQPNQLYYTLTSDTNEFGLVSPTNPD
IIVKTLLDFDKVKDFNLVLTVQDTPFAPVESPSFTATTTIMVTIVDVDNRPPWFQPCNKY
EVGGAMVCQSSGYTAKVNLNEQEILQLKPGPIHAIDGDSLNEEITYSFLSGEQLDLFEIN
PNTGDVTMLRPTDVLGTITLTVLAAQKINTYQFATTSLTISVQVKSLHPPEFQKSRYEGV
VSSVGTIAVDPTNKDEPLQIIAIDKDYAATGNINPYIKYSIKGSNDFSIMNGYLFMKKEV
PDGQLSLQVEALDTDNDESATAELLVDVKTDATEYHLRRYETQREVTVSVFDALGMRTGL
TTTSLPPNTTTEESTTISKTTEDIVSTTISKTTEDIVSTTISKTTEDIVSTTISKTTEDI
VSTTVSKTTGDIVSTTDSITTVLPSTTTESITSTINNSGVFGVGDMAALGASLGVLLFVC
LVVIGVLAHCIQKWKTDCRKISEASMFQRTLNQGSISKKGGNPYTNMAFLNEKDGGSTGS
DNPDGGSIKADEEHLYDNSLVRESSAPVKSPEHDDSSLTGSENTNTDSEKEVKPILTKER
RMEEGYKSVWFKEDIDPDAKEEVVIIPDSREDDSEEEDEDEDTDRPVKKVVFAEADLDSG
LGVKIEDPAEDSDDDDMVTVDL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggacgggattcatccacccttcactgtgaggacgtccatcagctttctgcttctgatt
ctgcttcaaacatctgctgatgcccaaagcatctgtagtgctcctcaaattgtgaacttt
gatgaaaacaatgctgtgggtgctgtcgtgttggacatcactgtgctgccgggggtcacc
cttaccttcaaaacacctgaaaaccctgacactgataacccatttgaactcaacggtaac
cagctgatagctaagagatcgttagactatgagactcagagaacttttacagtcaacatc
aactgccttcaggcagacacaagcttcccgttggtctttgttgtagtacttcaaaacttg
aacgataacgcgccacaatttgctgaaaacccctacaatgtgaacttcaatgagatgtct
ccagtgggcacaactgtgggccggtttgctgccacagatttggatcagcctaatcagctc
tactacacactgacatctgacactaatgaatttggactggtgtcaccgaccaacccggac
atcattgtaaagactcttcttgacttcgacaaagtcaaagatttcaatttggtgttgacc
gttcaggacacaccgtttgcaccagtggagagtccttcgttcactgccaccaccaccatc
atggtcactattgtagatgtggacaacagaccaccatggtttcagccctgcaataagtat
gaggtggggggcgctatggtctgccagagttctggctacaccgccaaggtcaacttaaac
gaacaagagattttacaactgaaaccaggaccgattcatgccatcgatggtgactcgcta
aatgaggagataacctactcattcctgagcggtgagcagcttgatctgtttgagatcaac
ccgaacacaggggacgtcaccatgctgaggccgaccgacgtgttggggacaatcactctg
acagtgctggctgctcagaagataaacacttatcagtttgccaccaccagtttgacaatc
agtgttcaggtgaagagcctccatcctccagagtttcagaagtctcggtatgaaggcgtt
gtctcttcagtaggaaccatagcagtggacccaaccaacaaggatgagccactgcagatc
atcgccatagataaggactatgctgctactgggaatataaatccttacatcaagtactcc
attaagggaagcaatgacttctccatcatgaacggttacttattcatgaaaaaggaagtc
ccagacggccaattatctctgcaagtggaggcactagacacagacaacgatgaatcagcc
acagctgagctcttggtggatgtgaaaacagatgccacagagtaccacctgcgtcggtat
gagacacagagagaagtgaccgtgtctgtttttgacgccctgggaatgaggacgggtctc
accaccaccagtttgcctccaaacactacaacagaggaatccaccaccatcagcaagaca
acggaagatattgtgtccaccaccatcagcaagacaacggaagatattgtgtccaccacc
atcagcaagacaacggaagatattgtgtccaccaccatcagcaagacaacggaagatatt
gtgtccactaccgtcagcaagacaacgggagatattgtgtccaccaccgacagcatcaca
actgtcctccccagcacaaccactgaaagcataacttccacgatcaacaattcgggtgtc
tttggagtgggggacatggcagcgctcggtgcgagtctgggtgtcctgctgttcgtgtgt
ctggtggtcatcggtgtgctggcccattgcattcagaagtggaaaacagactgtaggaag
atctctgaagccagcatgtttcaacgcactctgaatcaaggttcaattagtaaaaaggga
ggaaacccttacaccaacatggccttcctgaacgagaaagatggaggcagcacaggctca
gataatccagatgggggaagcataaaggctgacgaagagcacctgtatgacaacagcctg
gtcagagagtcttcggcaccggttaaaagcccagagcacgacgacagcagcctgacagga
tctgaaaatacaaatacggacagcgagaaggaggtgaaacccatcctgaccaaggagcgg
cgcatggaggaagggtacaaatcggtctggtttaaggaggacatcgaccccgatgctaag
gaggaagtggtcatcatcccagacagcagagaggatgacagcgaggaggaagatgaggat
gaagacactgacaggccagttaaaaaggttgtctttgctgaggctgatctagatagtgga
ctcggggtaaagatagaggatccagcagaggactcagatgatgacgacatggtgaccgtg
gatctgtga
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