Scomber scombrus (Atlantic mackerel): 133981838
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Entry
133981838 CDS
T10651
Symbol
ptprz1a
Name
(RefSeq) LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase zeta
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133981838 (ptprz1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssco01009
]
133981838 (ptprz1a)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssco00535
]
133981838 (ptprz1a)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
133981838 (ptprz1a)
Protein phosphatases and associated proteins [BR:
ssco01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
133981838 (ptprz1a)
Proteoglycans [BR:
ssco00535
]
Cell surface proteoglycans
Others
133981838 (ptprz1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
Tc-R-P
PTP-SAK
PTPlike_phytase
GUN4_N
DSPc
PTP-NADK
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
133981838
NCBI-ProteinID:
XP_062276679
LinkDB
All DBs
Position
6:complement(1663632..1716872)
Genome browser
AA seq
1757 aa
AA seq
DB search
MLGHGTLNQDNWAKKFPSCSNARQSPVNIEESLSQVKLQYQKLRFDGWESLTPESTTIKN
DGKTVAVDVDGDFYVSGGGLRSKFKVGRITFHWGRCNASSEGSEHSLDGVKYPLEMQIYC
YEADLFNSLDETIKAGGRITALAVMFETSYDDNVNFTSVIEGINSVSRYGKSSEVLPFAL
RGLLPNSTEKYFIYNGSLTTPPCTETVEWIVFKNTAAISDEQLEVFCEVMTMQQAGYVML
MDYLQNNYREQQQQFMGQVFSSYTGTEEVLSPGTMSNTPPSLMFMCPKDTYEPDLSWSEP
VQTEDYGLAWIPTNSQRTTTVGSSLIPVPSVRTTTAEPGWRRTSTHPAPPVRSTQFGHVL
SPSEETAQRSTSTEPADVTLLPEIRGGSDFSGNAPTSTTISTSIPPLYVDSKTKSVFGDI
PKYSSEKAKGGVSTTAPTFTSTETKGGKSISSHSSSTTTLASRPGDTSSSTSSSSVIQAE
VDRGLARAVDEDATTDGGVSPAPGGLPEIQAETSTSQPSSSRDTQRPTTPSAPNFSSTKP
SVWLSGVLLQTRQPLSKGERSSVLPXPSPSSPLCDTADPRCCLLQLPAXPSLSSWPVLSA
SASGSQHAAIAHSKDPASPLTPTLSASTLPHLPHPLQPLSGWETDPVLPGVGFDDNDSDG
DLMSGSWSSSSSSGDTSVFSDTPPLQMLPDPSGTGVTAEASESPWDTSLSVSLSLSPTLQ
PSVLLSSDVTLSGATPGLSRSFSAGFEDSRYATGSSVDSFLPEVSTDGFSLASDVEAMCG
CSLEPSQSSSWLHASPHVSLPSSAWDSASLDLYSSVGFPSASGVGIDDLLSSLSVAGSDG
LSLDQPLLSHSAISPSSSSPHSHFLQATHSDLPVSVAATTSGVRDPWVSASNGDSTLPSS
PTTTTTTFTPTTEMQVLDISSGASSSVLFPDSQEGVDQEWDRVQTSASGESGLPYSTKIS
STIPSSTTSASGQTPDDLEERSSAFYFESESGSAIASEVAGPAAPTIPAVASASPWSLGG
EEESGSGQGDSLYDNETSSDFSISERTERESEEEEPVEDASNSSHESRVGSIRERERKAV
VPLAVISTLTIFGLIILISILIYWRTCFQTAHFYIDDSSSPRVITAPSTAALIPDEQTAF
TVKDFVKHVGDLHDTNGFQREFEILKESYEEVQVCTVDMAITTDSSNHPDNKTKNRYSNI
LAYDHSRVRLSPQADTDGKTRDYINANYVDGFKKTRSYIAAQGPLKSSTEDFWRMICEQN
VSVIVMITNLVEKGRRKCDQYWPSEAQEEYGGLLVTMKSSRELAYYTQRTFTIRNTQTKK
ASQKSLSSERTVTQYHYTQWPDMGVPDFALPLLSFVRKSSRARTDSMGPVVVHCSAGVGR
TGTYIVLDNMLKQTREENNVNITGFLKHIRTQRNFLVQTEEQYVFIHDALVEAILCGETE
VASAQLHRFVDELLTPGSAGRTRLDKQFKLVCHLGVKQCDYSAALQESNRSKNRSCSVIP
VERSRVRLSTTAGETSDYINASYITGYRQRSEFIITQHPLPDTIKDFWRMIWDHNAQVIV
SLLPANKEEAELGVFWPRKGQPISYEMFTVTQRSENHICLANEDMLVVQEYVLEATQDDF
VLEVKHYRAPRWPNPDSPISNTFELLNLVKEDSVTKEGPTVVHDDVGGVTAGTFCALSSL
TCQLETEGSVDVFQAAKLTNLMRPGIFSNIEQYQFLYKAMLSLIGTQEDEKTLQSSDNNG
TIVVGTASTAESLESLV
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atgctgggacacggaacattaaaccaggacaactgggccaagaagttcccgtcgtgcagc
aacgccagacagtctccggtcaacatcgaggagagtctgtctcaggtgaagctgcagtac
cagaagctgaggttcgacggctgggagagtctgacgcctgaaagcaccaccatcaagaac
gatggcaagaccgtggcggtggatgtggacggagacttctacgtcagcggcggaggcctc
aggtcaaagttcaaagtggggcgtatcaccttccactgggggcgctgcaacgcctcctca
gagggctccgaacacagtctagatggagtcaaataccctttagagatgcagatctactgt
tacgaggcggatctctttaactctttagatgaaaccatcaaagccggaggcagaatcaca
gcgctggccgtgatgtttgagacgagttatgacgacaacgtgaacttcacgtccgtcata
gaaggaatcaacagcgtgagcagatacggaaagagctccgaggttttacccttcgcactt
cgaggtctcctgccgaactccaccgagaagtatttcatctacaacggctctctgacgacg
ccgccctgcaccgagactgtcgagtggatcgtcttcaagaacacagcggccatctctgat
gagcagctggaggttttctgcgaggtgatgacgatgcagcaggccggatacgtgatgctg
atggattacctgcagaacaactacagggagcagcagcagcagttcatgggtcaggtgttc
tcctcctacaccggcaccgaggaggtcctctcaccaggtacgatgtctaacactcctccc
tctcttatgtttatgtgtccaaaggacacttatgaacccgatctgtcctggagtgaaccg
gtccaaactgaggattacggtctggcctggattcctacaaactcacagaggaccacgacc
gttggatcctctcttatacccgtaccaagcgtcagaaccacaacagcggagccaggttgg
aggagaaccagcacccatccagccccaccagtcagatctactcagtttggtcatgtgttg
agcccctctgaggagacggcacagcgcagtacctccacagaaccagcagatgtcaccctg
ctgccagagatcagaggaggttcagacttcagtggcaacgctcccacctcaacaaccatc
tccacctccattcctcctttatacgtagactcaaagacaaagagtgtttttggtgacatc
ccaaaatactcctctgaaaaagccaaaggtggtgttagtaccactgctcccacattcacc
agtacagaaacaaaaggtggtaaaagtatttcttcacacagcagctccacgaccacgttg
gcgtctcgtcccggcgacacgagcagctccacatcttcatcgtccgtcatccaggccgaa
gtcgaccggggcctggcgcgtgccgtagatgaagacgccaccaccgatggaggtgtgtcc
cctgcacctggaggtcttccagagatccaggcagaaacctcgacttcccagccttcctcc
tcaagggacacgcagcggcccacgactcccagtgcgcctaatttttcatctaccaagcct
tctgtctggttaagtggcgttctcttgcagaccaggcagccgctgtctaagggtgagcgc
tcctctgtcctccctnncccctctccctcctcccctctgtgtgacaccgcggacccccgc
tgctgcctcctccagctgcctgcatgaccttccctctcgtcttggcctgtgttgtccgcc
tctgcctcaggctcccagcatgccgctatcgcacatagcaaagacccagcttctcctcta
acccccacgctctctgcctccaccctgcctcacctccctcaccccttgcaacccctgtct
ggttgggagactgaccccgtcctccctggtgttgggtttgatgataatgatagcgatggt
gatttaatgtctgggtcttggtcttcgtcgtcctcttcaggtgacacctcagtgtttagt
gatacccctccactccaaatgttgccagatccgtctggcaccggcgtcaccgctgaggcc
tctgaatccccctgggatacgtcactctcggtctccctgtctctcagccccaccctccag
ccttcagttctcctctctagtgacgtcacgctttctggcgcaactccgggcttatcccga
tctttctcagctgggtttgaggactcacggtacgccacggggagctcagtagactctttt
ctcccagaggtcagcacggatgggttttcacttgctagtgatgtcgaagccatgtgcggc
tgttctctggagccttcgcaatcctcatcctggttgcatgcctcgcctcatgtcagcctg
ccgtcctctgcttgggactctgctagcttagatctttactctagtgtgggcttcccttca
gcctctggtgttggtatagatgacctcctgagttctctatctgtggcgggttctgatggt
ctgtccttagaccagcctttactctcccatagcgctatctctccttcatcgtcctctccc
cactcccattttctccaagccacccatagtgacctacccgtttctgttgcagccaccacg
tctggcgtcagggatccctgggtctctgcatcaaacggggactctaccctcccttcctct
cccacaaccacaaccaccaccttcacccctaccacagaaatgcaggtgttagacattagc
agtggtgcctccagctcggtcctgtttcctgactcccaggagggtgtagatcaggagtgg
gacagggttcaaacctcggcctctggggaaagcgggctcccttattcgactaaaatcagt
agcaccattccctcgtctacgacttcggcgtctggtcagacaccagatgatttggaagaa
cgctcctctgcgttttattttgaaagcgagagcggcagcgccatcgcatcagaggtagca
ggccccgcagctccaaccatacctgcggtagcctcggcttcaccctggtcgctgggcggg
gaggaggagagcggctcaggtcagggtgatagcctgtacgacaacgagacgtcgtctgac
ttcagtatctcagagcgaacagaaagagagtcggaggaagaagagccagtcgaagatgcc
agtaacagcagccacgagtcgagggtcggctccatcagggagagagagaggaaggccgtg
gttcctctggccgtcatctccacgctcaccatcttcggcctgatcatcctcatcagcatc
ctcatctactggaggacgtgttttcagacggctcatttctacattgatgacagctcatca
cccagagtcatcactgcaccttctactgctgcgttgatacctgatgagcagacggcgttc
acagtgaaggattttgttaaacacgtcggcgatcttcacgacaccaacggcttccagaga
gagtttgagatactgaaagagtcttacgaggaggtgcaggtgtgcacggttgacatggcg
ataaccaccgacagctccaaccatcccgacaacaagactaaaaacagatacagtaacatc
ctggcctacgaccacagcagagtgcgtctctctccgcaggccgacaccgacgggaagacg
agagattacatcaacgccaactacgtggatggttttaagaagaccaggtcctacatcgcc
gctcaggggcctctgaagtcgagcaccgaggacttctggaggatgatctgtgagcaaaat
gtcagcgtcatcgtcatgatcaccaacctggtggagaaaggacgaaggaagtgtgatcag
tactggccctctgaggctcaggaggagtacggaggcctgctggttacaatgaagagcagc
agagagctcgcctactacacccaaaggaccttcaccatcaggaacactcaaactaaaaag
gcgtctcagaagagtctcagcagcgagcggacggtgactcagtatcattacacccagtgg
cccgacatgggcgtccccgacttcgctctgccgctgctcagcttcgtccgcaagtcgtcc
agagccagaacggacagcatggggccggtggtggtgcactgcagtgcaggcgttggtcgg
accggtacgtacatcgttctggacaacatgctgaaacagaccagagaagaaaacaacgtc
aacatcaccggcttcctgaaacacatccgcacacagaggaacttcctggttcagacagag
gaacagtatgttttcatccacgatgccttggtggaagccatcctgtgtggagagaccgag
gtggcgtcggctcagctgcaccggtttgtggacgagctgctgactccgggttcggcaggg
agaacgcgcctcgacaaacagttcaagctggtttgtcacctgggagtgaagcagtgtgat
tactctgcagctctgcaggaaagcaaccgcagcaagaacagaagctgctctgtgattcct
gttgagaggtcacgagtgcgtctgtctacgacggcgggggaaacgtcggactacattaac
gcttcgtacatcacaggttacaggcagaggagcgagttcatcattacccagcatcctttg
cccgacaccatcaaggacttctggaggatgatctgggaccacaacgctcaggtcatcgtg
tctctgctgccagctaacaaggaagaggcggagctgggcgtcttctggcctcgcaaaggg
cagccaatcagctacgagatgttcaccgtcactcagaggagcgagaatcacatctgtctg
gccaacgaggacatgctggtggtccaggagtacgtactggaagctacacaggacgacttc
gtgctggaggtgaaacactaccgcgccccccgctggccgaacccagacagtccaatcagc
aacacctttgagctcctgaacctggtgaaagaggacagcgtcactaaggaaggacccact
gtggttcacgatgatgtgggaggagtcacagcgggaactttctgtgctctgtcatctctg
acgtgccagctggagaccgaaggctcggtcgatgtcttccaggcggcaaagctgacaaac
ctcatgagaccgggaatcttcagcaacatcgagcagtaccagtttctgtacaaagccatg
ctgagtctcatcgggacacaagaagacgaaaaaaccctccagtcctccgacaacaacggt
accatcgtggtgggaactgccagcactgccgagagcctcgagtccctggtgtaa
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integrated database retrieval system
