Scomber scombrus (Atlantic mackerel): 133981847
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Entry
133981847 CDS
T10651
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
133981847 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssco03400
]
133981847 (fan1)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
133981847 (fan1)
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
133981847 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
TPR_12
SduA_C
zf-WRNIP1_ubi
Motif
Other DBs
NCBI-GeneID:
133981847
NCBI-ProteinID:
XP_062276690
LinkDB
All DBs
Position
6:23698748..23704655
Genome browser
AA seq
986 aa
AA seq
DB search
MADKLKRSLSLSKSKKKGNVKTGTNTTPTPITSFFSSPQPSKLACPLCGQLVPRFKINEH
IDLQCQSFERGDSNAASASNSVVQSVQLSPRPRRTPPKSPEMAPKKEEEVKESQTSPYFK
KSNSQQVPREISSKTVVRTINLGSLSSKLSRKHHKTPERMVTEDKHAPTHPDKEEDPSEA
LNSSQKENLLVETLEDKSDSVTVIDLTSSSPETPAANLSCLEKPSEPKTVQKPATLSLLS
SSSKLAKRKKATPSKSKVTKKAKYDRSSRETETVSSGEATVETPDIDRYKTEEPSTITHD
PLFSSEETYKKNAALISSELLSESDAEKTDSSPPQRLPYYLRNFQTVLHAVLENEDDREL
FNQDDMSLVHAFEKLSVKGQKLYVRLFQRKLKWLQVNKLDYEEICSDLGPVAQELVQGGF
LQTENDLQDLGEALDLLPAPELKTLAKTFHLGNSGTQKQQLLDGLLRLSKQKSFFSPTSA
QNNIGTVILKRAKQLAGSCVRLCRGPRAVFSRILLLFSLTDTMDEEETAGGGQNQLFTIL
LVNSGRLAFPDYTVQRRAKVFQDREDLIRYEASMRALQEVISAMQAGQWDEALELYTAAK
NAWQELRQNHDLSHQKELPVFLRSFTTGWAYTRILSRGVEILQRLRQYEEAVEELRSLLL
QSVYCPDSRGRWWDRLALNLQQHLKKPEQAICAIRDGLLDPLVRTGHKLSLHQRAVRMKE
SASCKKYRLQLRDLPTIKVQDVKHVTIRGQLFPHEWGMGKSRFLIPANGEGEDSANANVI
CSVEELSLAHYQKQGFDQGIHGEGSTFSTLFAILLWDIIFMEGIPDVFRNQYQTCPLDLY
TDVFYENRKEAIDNRVQLLSEASVETLHSMLEDVWTSQEGKVCSLVSWERFSSLQQAQSL
VSCLGGAFLGGVIARMAKDYRHCRGGLPDLVVWNSSNNSYKLVEVKGPNDRLSQKQQIWL
DELQKLGADVEVCHVTATGARGARLE
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaactcaagcgaagtttatcgttgtccaagagcaagaagaaaggtaatgtt
aaaactgggaccaacaccactccgactcccatcacctctttcttcagcagcccgcagccg
tctaaactggcctgccctctttgcggccagctggtacccagattcaagattaatgagcac
attgatttgcaatgtcagagctttgagagaggagacagcaatgccgcctcagcaagcaat
agtgtcgtacaaagcgtccagttgtcacccagacccagaaggactcccccaaagtcccct
gagatggctccaaagaaagaagaagaggtgaaagaaagccagaccagtccttatttcaaa
aagagcaactctcagcaggtgccacgggagataagcagcaagactgtagttagaacaatt
aacctgggaagtctttcctctaagttatcgaggaaacatcataagacacctgagaggatg
gtgactgaggataaacatgcaccaactcatcctgacaaggaggaagatccttcggaggct
cttaacagctcacagaaagaaaatcttctggttgagactttagaggacaaaagtgactct
gtaacagtcattgacctgacgtcgtccagtcctgagaccccagcagcaaatctgtcatgt
ttagaaaaaccatctgaaccaaagactgtccaaaaaccggctactctaagtttgctctct
tcttcctccaaactagcaaagagaaaaaaagcaacaccttctaagtctaaggtcacaaag
aaagctaaatatgacagaagcagcagagagacagaaacggtgtcgtcaggtgaagccaca
gtagagacgcctgatatagaccggtataaaactgaggaaccctctaccattactcatgac
cctcttttcagttcagaggaaacatataagaagaatgctgcgttgatcagcagtgagttg
ctgtcagagtctgatgctgagaaaacagacagctctcctccgcaacgactgccctactac
ctacgcaatttccagaccgtcctgcatgcggtgctggagaacgaggatgacagagagctg
ttcaaccaggacgatatgtcacttgtacatgcatttgagaagctctcggtcaaagggcag
aagctctatgtgagactgtttcagaggaaactgaagtggctccaagttaataaactggat
tatgaagagatatgcagtgatttggggcctgttgctcaagagctggttcagggtggtttt
ctacagacagagaatgaccttcaggacctaggagaggctctggatctcctgccagcccct
gaactcaaaactctggctaagaccttccatctgggtaattctggtacacagaaacagcag
ctactggacgggcttctccgtctgagcaagcaaaagtccttcttctctccgacctctgct
caaaacaacattgggactgtcatcctcaaaagggcgaagcagctcgcaggttcctgtgtg
cgtctgtgtcgcggccctcgggctgttttctctcgcatccttctactcttttctctgacg
gacacaatggatgaagaggagacagcaggcggtggacagaaccagcttttcaccatcctg
ctggtcaactcaggacgtctggccttcccagactacacagtgcagcgcagagcgaaggtg
tttcaggacagagaggaccttatcagatatgaagcatccatgcgagctctgcaagaggtg
atctcagctatgcaggcaggccagtgggacgaggcgctggagctttacacagctgccaaa
aatgcctggcaagagttaaggcaaaaccatgacctcagtcatcagaaagagctgccggtg
ttcctacgcagcttcaccacaggatgggcctacacgcgtatcttatccagaggagtggag
atcttgcagaggctacgtcaatatgaggaagcagttgaggagctgcggtccttattattg
cagtcagtttactgtccagacagccgagggcgatggtgggacagactcgcactaaacctt
cagcagcacctcaaaaaacctgaacaagctatttgtgctatcagagacggactattagac
cctctggtgcgaacaggacataagctgtccctccatcagagagctgttaggatgaaagag
tctgctagctgcaagaagtaccgtctacaactcagagacctgcctactatcaaagtccaa
gatgtcaaacatgtgaccatccgaggacagctgtttcctcatgaatggggcatggggaaa
tctcggtttcttattccagcaaatggagaaggggaagatagtgctaatgctaatgtgata
tgctctgtcgaagagctctctttagcacattaccagaagcaaggttttgatcaagggatc
catggagaaggctcaacattttctacattgtttgctattctgctatgggacatcattttt
atggagggaattccagatgttttccgaaatcagtaccagacttgtccactggacctttac
actgacgttttctatgagaacagaaaagaggcgatcgataaccgtgtacagttactgagt
gaagcttcggtggagacgctgcatagcatgttggaggatgtctggacctcccaggagggt
aaagtgtgttcattggtcagctgggagcgtttctcctctcttcaacaggctcagtctctt
gtttcatgcctgggtggagccttcttaggaggagtaatagctcggatggcaaaagactac
aggcactgccgtggaggtttgcctgacctggtggtgtggaactcctccaacaacagctac
aagctggtggaggtgaaggggcccaatgaccggctgtcccagaagcaacagatctggctg
gatgagctgcagaaactgggggctgatgtggaggtgtgtcacgtgacggctactggagcc
agaggagctcgtctggaataa
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