Scomber scombrus (Atlantic mackerel): 133981857
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Entry
133981857 CDS
T10651
Symbol
nfatc3b
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 3
KO
K17333
nuclear factor of activated T-cells, cytoplasmic 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04010
MAPK signaling pathway
ssco04020
Calcium signaling pathway
ssco04148
Efferocytosis
ssco04218
Cellular senescence
ssco04310
Wnt signaling pathway
ssco04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133981857 (nfatc3b)
04310 Wnt signaling pathway
133981857 (nfatc3b)
04020 Calcium signaling pathway
133981857 (nfatc3b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133981857 (nfatc3b)
09143 Cell growth and death
04218 Cellular senescence
133981857 (nfatc3b)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
133981857 (nfatc3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133981857 (nfatc3b)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
133981857 (nfatc3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
133981857
NCBI-ProteinID:
XP_062276701
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All DBs
Position
6:2610102..2646890
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AA seq
937 aa
AA seq
DB search
MSSVNCTEELDFRLIFEDDGRHAAGPDLHVRTPPSSEQPVSPELLGHHPCLPVANDYQHL
GYQIQGPQYAAQGNLRAFDCPQIQITSIAPNNHVDPGGIQQALAVGGAEGGYMEASWTRD
QLFLPLDPCYRDPALCPSPCSSLSSRSWISDLSSCESFSNVCEDVEGELRDAARLALGSP
LGSPVGSPGCGGGAFGVELWQQKYQHPSAFSPALSPHQSPRQSPCHSPRTSVTEESWLHR
RPTSRPSSRPTSPCGKRRHSSADPRARSPSPSPHHSPSPTPGASPRGSVTDDTWVGSPAG
AMGGLLMSCYQDLDVPSKTRRTSGSQLGDGVLEELRTVIPFQESAGGGGGEEAREQEGLA
ELFLQVPSHFSWNKPKPGNPPLFRNSSPPPLDCLLPSRFDQYELKLEVQPKSYHRAHYET
EGSRGSIKALTGGHPLIKLSGYSEQPVSMLLFIGTADDRYLRPHCFYQVHRVTGKTVTTT
CQEKIIEGTKVLEIPLQPENNMSASIDCAGILKLRNADIEMKKGETDIGRKNTRVRVVFR
VALPQQGGRTLWLQTVSVPVECSQRSGQELPHVDSFSPTSCSVDGGDELLITGSNICTQS
KVVFMEKGQDGRSLWEIDARVLPEKSSGSSIVVEIPPYNKKTTCSVQVQFYISNGKRRRS
LTHTFTYLPGDRRHMLGAAAVAGVVAGATLVKQERWEPDHISHNAPGFCHDRALSPDLVY
YDTFSLPMHCAPVSQSAPRLHHPSHTSLMFAHTSSSSSSSIPLHSSLIPLQSFSIPPQTS
SLPPQTSAVPLQSFTIPPQPPSSSSSSSSLPPQSASIPIPPLSSSGGHHHRDQSSPCLIS
RRAFVTPTAPAVAPVVVTAAPPKESRGALSIKQEPQEPNPASLGLQEITLDDVNEIIDRD
ICSLSSVVQPDQFDQYHQYDWEHKSGDAALPFCGGPQ
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgttaactgcacggaggagctggacttcagactgatctttgaggacgacggg
agacacgctgcaggtccagatctccatgtgaggacgcctccctcctccgagcagcccgtc
agcccggagctgctgggtcaccatccatgcctccccgtcgccaacgactaccagcacctc
ggctaccaaatccaagggccccagtatgcagcccaggggaacctcagagccttcgactgc
ccccagatccagatcacctccatcgcccctaacaaccatgtagatccgggcggtatccag
caggcgttggcggtgggcggggcggaggggggttacatggaggcgtcgtggacccgagac
cagctcttcctccctctggacccctgttatcgggacccggcgctctgcccgagcccctgc
agcagcctgtcttccaggagctggatctccgatctctcctcctgcgagtctttctccaac
gtgtgcgaggacgtggaaggggagctgcgcgatgccgcccgcctcgccctcggctcccct
ctcgggtcacccgtggggtcccctgggtgcgggggcggggccttcggggtggagctttgg
cagcagaagtatcagcatccgtcggccttcagcccggcgctgtcgcctcatcagtcgccc
cgccagtcgccctgccactcccctcgcaccagcgtcaccgaggagagctggctgcaccgc
cggcccacctccaggccgtcctccagaccgacgtcgccctgcgggaagagacgccactcc
agcgccgacccccgcgcccgctccccctccccctcccctcaccactccccgagcccgacg
ccgggcgcctcgccgcggggcagcgtgacggacgacacctgggtgggaagccccgccgga
gccatgggggggctcctcatgtcctgttaccaggaccttgacgtcccctcgaagaccagg
aggacgtccgggagtcagctgggcgacggcgtactggaggagctgaggactgtgatcccg
ttccaggagtctgccggcggcggggggggggaggaggcgcgggagcaggaaggactggcc
gagctcttccttcaggtgccctcacacttcagctggaacaaacccaaaccaggaaacccc
cctctgttcaggaactcgtcccctcctcctctcgattgccttctgccgagccggtttgac
cagtatgagctgaagctggaggtccagcccaaatcctaccacagagctcattatgagacg
gagggcagccgagggtccattaaggctctgactggaggacacccgctcattaagttgagc
ggctacagcgagcagccggtcagcatgctgctgttcatcggcaccgcggacgaccgatac
cttcgtcctcactgcttctaccaagtccaccgagtgacggggaagactgtcaccaccacc
tgccaggagaagatcatcgaaggcaccaaagtgctggagatccccctgcagccggaaaac
aacatgtctgccagcatcgactgcgccggcatcctgaagctgcgtaacgccgacatcgag
atgaagaaaggcgagacggacatcgggaggaagaacacgagggttcgcgttgtgttcagg
gtcgctttgcctcagcagggcggccggacgctgtggctgcagacggtgtccgtacctgtg
gagtgctctcagcgttcgggtcaggagcttcctcacgttgacagcttcagtccgaccagc
tgctccgtagacggaggagacgagctgctcatcaccggatccaacatctgcacacagtcc
aaggtggtgttcatggagaaaggacaagatggacgatcgctgtgggagattgacgccaga
gttttacctgagaaaagcagcggatccagcattgtggtggaaatccctccttacaataag
aagacgacgtgttcggtccaggttcagttctacatctccaacgggaagagaagaagaagt
ctaacgcacaccttcacctaccttcccggagaccgacgccacatgctcggagccgccgcc
gttgccggggtcgtcgccggggcaacactggtcaaacaggagcgctgggagccggaccac
atctcccacaatgcacctggcttctgtcacgaccgagcgctcagcccagatctggtttat
tacgacaccttcagcctcccgatgcattgtgctcctgttagccagagcgctcctcgtctt
catcatccttcccacacctccttaatgtttgctcacacctcctcctcctcttcctcctcc
atccctctccactcttccttgatccccctccagagcttctccatcccccctcagacctcc
tccctgcctccccaaacctccgctgtgcccctgcagagcttcaccatcccgcctcagcct
ccctcctcttcttcctcctcctcctcccttcctccccaatccgcctccatcccaatccct
cctctcagctcctctggggggcatcatcacagggatcagtcgtctccgtgtctgatctcc
aggagagccttcgtgacccccactgcccccgctgtcgcccccgtcgtcgtcaccgctgcc
cccccgaaggagtcgagaggggcgctgagcatcaaacaggagccgcaggagccgaatcct
gcatctctgggcctccaggagatcacactggatgatgtgaacgagatcatcgaccgggac
atctgcagcctgagcagcgtcgtccagcccgaccagttcgaccagtaccaccagtacgac
tgggagcacaagtctggtgacgccgccttaccgttctgtggaggtcctcagtag
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