Scomber scombrus (Atlantic mackerel): 133981968
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Entry
133981968 CDS
T10651
Symbol
rfx4
Name
(RefSeq) transcription factor RFX4
KO
K09174
regulatory factor X 4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133981968 (rfx4)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Other basic domains
RF-X
133981968 (rfx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
133981968
NCBI-ProteinID:
XP_062276834
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All DBs
Position
6:14570449..14588378
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AA seq
736 aa
AA seq
DB search
MHCGLLEEPDMDSTESWIERCLNESESKRYSSHTSLGNMSNDEHEEKENNRASKPHSTPA
TLEWLEENYEIAEGVCIPRSALYMHYLDFSEKQDTQPVNAASFGKIIRQQFPALTTRRLG
TRGQSKYHYYGIAVKETSQYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPE
FPNVKDLNLPASLPEERVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSTTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKIALHD
LPENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVINSTDITFQMLEDWRNVDLNSITK
QTLYTMEDSQEEHRQLIIHLYQEFDRLLEEQSPIEAYIEWLDSMVDRCVVKVAGKRPGCL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANDL
MRAMKGEGSTADREEEFTLTETTPASPSPASYSPARSVHSVGVSSASSPTAAVSPEYTGV
TATTGAVQSYTWSLTYTVTTAGGSAPEAGQQLSCMRSSAPVPPPSSTHRMPVYTHREEHG
YTGSYNYGSYANQHPHSIQSQYPSLAHEPAIPAPLHYSAYHRSSAQYQLNGQMSRMEPCL
MGSTPRLHPTPVAPRWPDVSPANSCYTSPPMHSSRYAASGDMYSPLGPRRNSEYEHSQHF
PGFAYINGEATTGWAK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgggctgctggaggagcctgatatggattccacagagagctggattgaaaga
tgcctaaatgagagcgagagcaagcgatactccagtcacacgtctctggggaacatgtcc
aacgatgaacatgaagaaaaagaaaacaacagagcctctaaaccacattcgacaccggct
actctggaatggctagaagagaactacgagatagccgaaggtgtgtgcatcccccgaagt
gccctctacatgcattacctggacttcagtgaaaagcaggacacacagcctgtgaatgca
gccagctttggaaagattataaggcaacagtttccagcgttgactaccagaagactgggg
acaagagggcagtccaagtaccactactacggcatagcagtgaaggagacctctcagtat
tatgacgtgatgtactccaaaaagggagcggcgtgggtgaacgagacggggaagaaagag
gtcacgaagcagacagtggcgtattcaccgcgctccaaactggggacgctcctgccagag
tttccaaatgtcaaagacctaaatttgcccgccagcctgccagaagagagggtgtcaacc
ttcatcatgatgtacagaacgcactgtcagaggatactggacacagtcatacgagccaac
tttgacgaggtccaaagtttcctgctgcacttctggcaaggcatgccgccccacatgctc
cctgtcctcggctccactacggtggtgaacatagttggtgtttgtgactccatcctctac
aaggccatctctggggtgctgatgcccaccgtcctgcaagcactgcctgatagtttgact
caggttattcgaaaatttgccaaacagcttgatgagtggcttaaaatagcacttcacgac
ctcccggaaaacctgaggaatatcaaatttgaattatcgaggagattctctcagattcta
aagcggcaaacctcattaaaccacctatgtcaggcatcgcgaactgtgataaacagcact
gacatcacctttcaaatgctggaggactggaggaatgtggacctgaacagcatcaccaag
cagacactttacaccatggaggactcacaagaggagcacaggcagcttattatccacttg
tatcaggagtttgaccgtctactggaggagcagtctccgatcgaggcttacatcgagtgg
ctggactccatggtggaccgctgtgtcgtcaaggtggcagggaagaggcccgggtgccta
aagaaggtggcccaacagttcctgctgatgtggtcgtgtttcggtaccagagtcatccgg
gatatgaccctccacagcgcacccagctttgggtccttccacctgatccatctcatgttt
gatgattatgtgctttacctgctggagtccttgcactgccaggagagggccaacgacctc
atgagggccatgaagggcgagggcagcacagcagacagagaggaggaattcacgttgaca
gaaaccactcccgcctccccatctccagcatcctactctccggctcggtcggtccattct
gtgggcgtttcctcggccagctcccccacagcagccgtgtccccggagtacacaggagtc
actgccaccacaggcgctgttcagtcatatacctggtcccttacatacacagtgacaaca
gcaggcggctccgctccagaggccgggcagcagctgtcctgtatgaggagcagtgcacca
gtccctcctccatcctcaacccaccggatgccagtctacacccacagagaggagcatgga
tatactggcagctacaactacggcagctacgccaaccagcaccctcactccatccagagc
cagtacccaagtcttgcccatgagccggcaatcccagcccccctccactactctgcttac
caccgctcatctgcacagtaccagctcaacggtcagatgtctcgaatggagccttgcttg
atgggcagcactcctcgcttgcaccccacacctgtcgccccccggtggccagatgtgtca
ccggctaacagctgttacaccagcccacctatgcattcatcccgctatgccgcttccggg
gacatgtactctcccctgggcccacgcaggaactcagagtatgaacactcacagcatttc
cctggctttgcctacatcaatggagaggccaccacaggctgggcgaagtaa
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