Scomber scombrus (Atlantic mackerel): 133981983
Help
Entry
133981983 CDS
T10651
Symbol
rasgrf1
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04010
MAPK signaling pathway
ssco04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133981983 (rasgrf1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133981983 (rasgrf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
PH_11
MYO6_lever
IQ
GOLGA2L5
COG3_N
DUF641
Motif
Other DBs
NCBI-GeneID:
133981983
NCBI-ProteinID:
XP_062276851
LinkDB
All DBs
Position
6:18243909..18262615
Genome browser
AA seq
1257 aa
AA seq
DB search
MQKGIRLNDGHVTYLGLLAKKDGTRRGCLSKKSSDNTKWHTKWFALLQNMLFYFENESSS
RPSGLYLLEGCICDRAPSPKPSLSAKECLEKQYYFTVSFTQENQKALELRTEDVKDCDEW
VAAISHASYRNLANEHETLMQKYLHLLQIVETEKTVAKQLRQQIEDGEIEIERLKSEISG
LLKNNEKIHDSPAATPTDDDSEIKKIKKVQSFLRGWICRRKWKTIIQDYIRSPHAESMRK
RNQVVFSMLDSEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFLH
QIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKLL
KQYEAKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERNSLDYAKSKLEELS
RIMHDEVSETENIRKNLAIERMIVEGCEILLDTSQTFVRQGSLIQVPMSEKGKITRGRLG
SLSLKKEGERQCFLFSKHLIICTRGSGGKLHLTKNGVVSLIDCTLMEDPEGTDDESKSDK
SGQDMEHLDFKIVVEPKDSQSFTVILVASSRQEKSAWTSDISQCIDNIRCNGLMMNAFED
NSKVTVPQMIKSDSSLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDFL
NTFLHSYRVFTTADVVLDKLITIYKKPISAIPARSLELFFASSQNSKHLYGEPPSSPRAS
RKFSSPPPLAIAKNSSSPNRRRKLSLNIPIITGGKALDLAALSCSSNGYASMYSSMSPFS
KTTLDINKLYVSSPIASKIPDEGEDKKDKAEDTTACKQDLSVQEENDNDQNQSDEADPEA
SPTKSPTTPKNIKCKNSSEFTVFTYNNGMVMSSCREMDNNRSALSAASAFAIATAGANEG
TPTKEKYRRMSLASTGFPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSPDFETNNELK
TKVIAFLEEVMHDPELLTQERKAAANIIRTLTQEDHGDNQITLEDVTQLVGTGKAEPFES
HSALEIAEQLTLLDHLVFKVIPYEEFFGQGWMKNDKNEKTPYIMRTTKHFNDISNLIATE
ILRCDDVVTRVVVIEKWVAVADICRCLHNYNAVLEITSSLNRSSVFRLKKTWLKVSKQTK
ALIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDNLVNFS
KMRMISHIIREIRQFQQTAYKLDLEPKVAHYLMDGRSVLDEESMYEASLRIEPKVPN
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagggaatacgacttaatgatggtcatgtcacctacctggggcttttggcaaaa
aaggatggtacaagacgagggtgcttgagcaaaaagagctcagacaacacgaaatggcac
acaaagtggtttgctttgttacaaaatatgctcttttattttgagaacgagtccagttct
cgaccctccggattatacctgttggaaggatgcatatgcgacagggcgccttcaccaaaa
ccttcactgtcagccaaggagtgtttggaaaagcagtactatttcactgtcagcttcacc
caagaaaaccaaaaggcgcttgagttacgcacagaagatgtaaaggactgcgatgaatgg
gtggctgccatatcacacgccagttacagaaacttggccaacgagcatgagactctcatg
cagaagtatcttcatctgcttcagattgtggagacggagaaaacagttgctaagcaactt
cgacaacagatagaagatggggaaatagagattgaaaggcttaagtcagagatctccggg
ctgctcaaaaacaatgagaagatccacgacagccctgcagccaccccgactgatgacgac
tcagaaatcaagaagatcaaaaaagtccagagcttcctgcgaggctggatctgcaggagg
aagtggaagaccatcatccaggattacatccgctcaccacacgctgagagcatgaggaag
aggaaccaggtggtgttcagcatgttggactcggaggctgagtacgtccagcagcttcac
attctggtgaacaacttcctgaggccgctccgcatggcagccagctccaagaagccaccc
atcacccatgatgacgtcagcagcatatttctcaacagtgaaactatcatgtttctacat
cagatattttaccaggggttaaaagccagaatagcaagctggccaacattagtgctggcc
gacctgttcgatatcctgctgcccatgctgaatatctaccaggagtttgtgaggaaccac
cagtacagcctgcagatcctggctcactgcaagcagaaccgagactttgacaagctgctg
aagcagtatgaggccaaacccgactgtgaggagagaaccctggagacattcctcacctac
cccatgttccagattccccgatacattcttacgctccacgaacttttggcccacacaccc
catgaacatgtagagagaaacagtctggactacgcaaaatctaagctggaggagctttcc
agaatcatgcatgacgaagtgagcgagactgagaacatcaggaagaacctggcgatagag
cgcatgattgtagagggctgcgagattctcctggacaccagccagacgtttgtaagacaa
gggtctctcatccaggtgccgatgagtgagaagggcaagatcacccgtgggcgactgggc
tctctatctctgaagaaggaaggggagaggcagtgttttctcttctccaagcatttaatc
atctgcaccaggggttctgggggaaagcttcatctcaccaagaatggagtagtctccctt
atagactgcactcttatggaggaccccgaggggacagatgatgagtccaaatcagacaag
agtggccaggacatggagcacctggacttcaagattgtcgttgagccaaaagacagccag
tcattcacagtcattttggtggcttcctcgaggcaggagaagtctgcatggactagtgac
atcagccagtgcatagacaatattcgctgcaatgggttgatgatgaatgcttttgaagac
aactccaaagtcacagtaccacagatgatcaaatcagactcaagcctgtactgtgacgat
gtggacatccgcttcagtaagatgatgaactcctgcaaggtgctgcagatccgctacgcc
agcgtcgagcgcctgctggagagactgactgacctccgtttcctttccatcgacttcctt
aacaccttcctgcactcctatcgcgtgttcaccaccgctgatgtggtgctagacaaactc
atcaccatctacaagaagcccatcagtgccatccctgcacggtccctggagttattcttt
gccagcagtcagaacagtaaacacctttatggggagccacccagctcgcccagggccagc
cgaaagttctcctcccctcctcctctggctattgccaagaactcatcatccccaaaccgc
cggcgcaagctctccctcaacatccccatcatcactgggggcaaagctcttgacctggct
gccctcagctgctcctcaaatggctatgcaagcatgtactcctccatgtccccattcagc
aagaccactttagatatcaacaaactgtacgtgtccagccctatcgcgagcaaaatacca
gatgagggagaagacaagaaggacaaggcagaagataccacagcgtgcaaacaagatctc
tcagtacaagaggaaaatgacaatgatcaaaaccaaagtgatgaagcagatccagaagcc
tctcctacaaagtcaccaacaaccccgaaaaacatcaaatgcaaaaactcctcagagttc
accgtgtttacctacaacaatggcatggtgatgtcctcatgtcgagagatggacaacaac
cgcagtgccctgtctgctgcctccgcctttgctattgctacagctggtgccaatgaaggc
acccctaccaaggaaaaatatcgaaggatgtccctcgccagcacaggattcccaactgat
cagagaaatggagacaaagagtttgtgatcagacgagctgcgaccaacagagttcttaat
gtattgaggcactgggtgtccaaacactctccggactttgagactaataatgagctgaaa
acaaaggttattgccttcctggaggaagtgatgcatgaccctgagctgttgacccaggag
aggaaagcagcagctaatatcatcaggactctaactcaggaagatcatggtgacaaccag
atcacccttgaggacgtgacacaactggtgggcacagggaaggctgagccttttgagagt
cactctgccttggagattgcagagcagctcaccctgctggaccacctggtgtttaaggtc
atcccatacgaggaattctttggacaaggctggatgaagaatgacaaaaatgagaagacg
ccatatatcatgagaacaacaaagcacttcaatgatataagcaacctcatcgccacagag
atcctgcgctgtgatgatgtggtcactcgggtcgtggtcattgagaaatgggtagctgtg
gctgacatctgccgctgtctccataattacaacgccgtgcttgagatcacctcctctctc
aaccgcagctcggtcttccgcctcaaaaagacctggctcaaggtttccaagcagacgaag
gcattaattgacaagctgcagaagctggtctcatcagaggggaggttcaaaaacctgaga
gaggctttgaaaaactgtgatcctccctgtgtgccctatttgggaatgtacctcactgat
ctggctttcattgaggagggaacacccaactacaccgaagacaacttggtcaacttctca
aagatgagaatgatttctcacatcatcagagaaatcaggcagtttcagcaaacagcttac
aagcttgaccttgaaccaaaggtagcccattatctaatggacgggagatctgttctggat
gaagaaagcatgtacgaagcctcgctcagaattgagcctaaagtgcccaactga
DBGET
integrated database retrieval system
