Scomber scombrus (Atlantic mackerel): 133982011
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Entry
133982011 CDS
T10651
Name
(RefSeq) DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Other basic domains
RF-X
133982011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133982011
NCBI-ProteinID:
XP_062276887
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Position
6:23771782..23781123
Genome browser
AA seq
1390 aa
AA seq
DB search
MSSSRTQQMYAFNWIRNHLEEHPETSLPKQEVYDEYKSYCDNLGYNPLSAADFGKIMKNV
FPNMKARRLGMRGKSKYCYSGLRKKAFVHMPSLPNLDLQKSGDGCELMEASGQSPSAEDE
MRSAACGLVCEWAQKVLSRQFDHVEDLARFLLNSHYIGTKSMAALTVMTGTPTGMKTPTP
ASAFVPTAEANSFQPQVKTLPSPSVDAKQQLQRKIQKKQQEQKLHSPLPIEAQVKRTEAS
TPGPTIPCGSPALLSPQPTIGIVVAAVPSPVTVQRSRQLMTSPSPVGTAEGKVLPVNFQV
VTQSLKQSPKGPQNISASPVGDRLARHGTRYAQILPKPSATSAITLRSPPTLLITNSPIK
TVMPTNHVSSVNVVKMTAIALAPSSSTTTVRPASAGLSTIAASDDSLHLHSVSSAAIQSP
AFRPSAPVSTLSLSLCTDTKVVSEAGNDNNPTAGAEKTAVGAKEDRVAKFRAASEPSFLV
KCSPGPDKAARVKNDPTSPPTSIAVAGTQDRNNSNCHDSTLYLTVDNQSSNGNTLSSGPA
TVTPTSKDHCTDAKSPRKRTVPAGESHVIPVKRVFISQQPLAIIDNPKPGVSAAVKRIPR
PGTPARPESAPCKVTVKHTSIGPTQILALSDSPITHTEGSQTVVKPQALVVKHEGHSLIT
DTSTGAAGNNTSDQALLQQITGDPRAIPANSGAHEASVMSNLKSTIWEEGQLDELRKQAF
AQQMPAEHKQTPTDQLSIIAQPPETSGQLTLTQEMVDFAGSQPNMDYFPFNDDDMTQDSI
VEELVQMEEQMKLKGLFSSCVDVSLQGQSANNQGSILNAHQAGTAFYHSAHSSTTPVQTP
TPTPTPTPTPTPTSEMTLGHSLTRESPCSRMAPITPVDGAMGRHTPISTPLSNCSSSVPP
SPVECRNPFAFTPINSSITGYHDASIVSSSPVKPMQRPMATHPDKAKLEWINNRYNSTSG
GPLSNHSIGILPSYQDLVDDQFRKPHAFAIPGQSFQAQPRQDATHFGRLTPISPVQQQQQ
QQLVTGVTTPTKQESFAVPAPLDNKASTSSTSSTFRCRSVSPAVRQRNFSGNTGPPTTTT
NTTTTTRAVVSPFNSPITSEVLSILSNSQTVSSVHSMVQRSQSVPLNIMMQSEMLPVQGP
SNTAKITNVLLSKMEADGDDSVRGLGINNLPSNYTARMNLTQILETTPGFAGGTPHQTQL
PVSSSPAAFELQQHGYLTTGSGETVTFSTGDSQAQAGTGEQDQQQQQQLQENPVQTQPQL
LLQSTQQQEVEDEQQQLDFNNTVKDLLGDDGLNPSSQLVGQVASELNAVASDFSNDIRLT
SDLSSSITDLNTLDTNLLFDPNQQQEQYEDSTLEELKNDPLFQQICSDTVNSGFDWLESK
DQPTTVEMLG
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaagccgtactcaacagatgtatgcattcaactggatacgaaatcacctagag
gagcatccagagacttccctcccaaagcaagaggtgtatgatgaatacaagagctattgt
gacaatcttggctataatccactgagtgcagcagactttggaaagatcatgaagaatgtc
tttcctaacatgaaggcacgtcgactgggcatgaggggcaaatccaaatactgttatagc
gggttaaggaagaaagcttttgttcacatgccgtccttacccaacctggatctgcagaaa
tctggtgatgggtgtgagctgatggaggcgtcaggccagtccccgagcgccgaagacgaa
atgcgatctgcagcctgcggtctggtgtgtgagtgggcccagaaggtcctgagtcgtcag
tttgaccacgtggaggatctggcgcgctttctgctcaatagtcactacattggtactaag
tccatggctgcgctcactgttatgacgggaacacccacaggaatgaagacaccaactcca
gcttcagcgttcgtgcccacagctgaggcaaactctttccagccccaggtgaagaccctg
ccctctccctctgttgatgcaaagcagcaactgcagcgcaagatccagaagaagcagcag
gagcagaagctccactcacccttacccattgaggcccaggtcaagagaacggaggccagt
actcccggtcctaccatcccctgtggaagccctgctctgctctcccctcagcccaccata
ggcattgtagtagcagctgttcccagccctgtcacggtacagagaagcaggcagttaatg
acctcgcccagccctgtggggacagcagaggggaaagtgttgcctgtgaacttccaagtg
gtgactcaatctcttaaacagtcccccaaaggtccccagaatatctcagctagtccagtg
ggtgaccggctggcacgacacggtacccggtacgctcagatcctgcccaagccctctgcc
accagtgccatcacgctgcgctcaccccccaccctgctcatcaccaacagccccataaaa
actgtgatgcctactaaccacgtcagctcagtcaatgtggtgaagatgacggccatcgct
ctggctccaagcagcagcaccacgaccgtgcgacctgcctcggcgggtctgagtaccatt
gctgcttcagacgattcactgcatttacacagtgtgagctcagctgccattcagtctcct
gcattcagacccagcgctccagtctccaccctttccctttccctctgcactgacaccaaa
gtggtgtcagaagctggaaatgacaataaccccaccgctggcgcagagaaaactgctgtc
ggcgccaaagaggacagagtggctaagttcagggctgccagtgagccaagcttcctggtc
aagtgttctccgggaccagacaaagcagcaagggtaaaaaatgatcccacatcccctccc
acgtcaatagctgtagctgggactcaggaccgcaataacagtaactgccatgacagtact
ttgtacttgactgttgataatcagagctccaatggcaacacattatccagtggccccgcc
actgttaccccaacatcgaaagatcactgcacagacgccaagagccccaggaagcgcact
gtccctgccggggagtcccatgtgattcctgtgaagagggtgtttatctcccagcagcca
ctggctataattgacaatcccaaacctggagtcagtgctgcagtgaagaggatcccccga
ccgggaactcccgccagaccagagagcgccccctgcaaagtgactgtgaaacacacctcc
atagggcccacacagatccttgcactctctgactcgcccatcacacacactgagggctcc
cagactgttgtcaaaccccaggccttggtagtgaaacatgaaggccactccctcatcact
gacaccagcactggagcagctggaaacaacacatccgatcaggcgctgctacagcagatc
actggagaccctcgtgccataccagccaactcaggagcacacgaagcctctgtgatgagt
aacttaaagagcacaatatgggaggagggacagcttgatgagcttcggaagcaggcgttt
gctcagcagatgccagctgaacacaaacaaacccctacagaccaactttccattatagct
caaccccccgagacctcaggccaactcaccctcacacaggagatggttgactttgcaggt
tctcaacccaacatggattacttcccattcaatgatgacgacatgacccaagacagcatc
gtagaagagcttgtacaaatggaggagcagatgaagctgaagggtctgtttagtagttgc
gttgacgtgtctctacaaggccagtcagccaacaatcaaggctctatcctcaatgctcac
caggccggcactgccttctatcactcggcccacagcagcaccactcccgtccaaactccc
actccaacaccgacaccaaccccgacacccacccccacctctgaaatgacacttgggcac
agcctgacaagagagagcccctgttctcgcatggctcccatcactcctgtggatggagcc
atgggtcgccacacccccatcagtacgccactgtccaactgcagcagcagcgtccccccg
agcccggtggagtgcaggaacccttttgcgttcactcccattaactcgagcatcacaggt
tatcatgacgccagtattgtctccagcagcccagtcaagcccatgcaaaggcccatggca
acgcaccctgacaaggccaaactggagtggatcaacaaccgctataacagcacctctgga
ggtcccttgtccaaccatagcatcggtattctgcccagctatcaagacctggtagatgac
cagtttcgcaagccacatgcatttgcaattcccggccagtcatttcaggcccagccaaga
caggatgccactcactttggccgtttgacgcccatttctccggtgcagcaacagcagcag
cagcagctggtaacaggggtgactactcccactaaacaggagagctttgctgtgcctgca
ccattagacaacaaggcttcaacgtcatccacatccagtactttccgttgccgcagtgtt
agccctgcagtgcgccagaggaacttcagcggtaacaccggccctccaacaaccaccact
aacaccaccaccaccacccgagccgtcgtctcgccctttaactcccccatcacctctgag
gtgctcagcatcctttctaacagccagacagtcagctctgtccacagcatggtccagcgt
agccagtctgtgcctctgaacatcatgatgcagagtgaaatgctgcctgtgcagggtccg
agcaacaccgccaaaatcaccaatgttcttctcagtaagatggaggctgacggggatgac
tctgtccgtggcctggggataaacaacctcccctctaactacacggcccgtatgaacctc
acacagatcctggagacaactcctggcttcgctggaggaactccccaccagactcagctg
cctgtcagctccagccctgctgccttcgagctccagcagcatggctacctcaccactggc
agtggagaaactgtgactttctccactggggacagccaagcacaagcaggtactggtgag
caagaccagcagcaacagcagcagctccaggagaatcctgtgcagacacaaccgcagctc
ctcctccagagcacacagcagcaggaggtggaggacgagcagcaacagctggatttcaac
aacactgtcaaggacttgttgggggacgatggcctcaaccccagctcccagttggtcggt
caggtagcttcggagctcaacgctgtggcatccgacttctcgaacgacatcagactgacc
tcagatctgtccagtagcatcactgaccttaacacattggacaccaatctgctgtttgat
ccgaatcaacagcaggaacaatatgaagactcaacactggaagaactgaaaaacgacccg
ctttttcagcagatatgcagtgatactgtgaactctggttttgactggctagaaagcaaa
gaccagcctactacagtggagatgctgggctag
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