Scomber scombrus (Atlantic mackerel): 133982033
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Entry
133982033 CDS
T10651
Symbol
carmil2
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 2
KO
K20493
leucine-rich repeat-containing protein 16
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133982033 (carmil2)
Membrane trafficking [BR:
ssco04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
133982033 (carmil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Motif
Other DBs
NCBI-GeneID:
133982033
NCBI-ProteinID:
XP_062276911
LinkDB
All DBs
Position
6:31657876..31710271
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AA seq
1823 aa
AA seq
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MDSISQNLQDKISELLKPHRVCLVKPIILNQSSQSSSRSANRFLVLSLWRGYLVVNKQPV
RVESTFSFLEICSIDIHSLTQIVLETDRKTLSFSVLHIDDLEAMVSHMTGSLKRIFPDSS
PGKLLKTIPPELEQRLHTLTSRIEEELDGQPGSCGGFSDTYAALCDFNEMPFREEIQWDV
DNIYKMHKWRQFNLQDFSHLDSRDLAIAVAALSFNQWFTKIYSKELKLSVDIQQQLTFLL
SRSPGLEELSLEASGLKLDFAIKMAAALRDHTSSTLQSINLSGNAIEDKGVIALSLELEN
LVEGLKYLSLSRVSMTARGLGCLSQVLSTNQLFSVSLTHLDLSDNPGSLVTEDATFLFKF
LSSTNSLSHLDLSDTNCPLDTLFVSLSVGCCCKLMHLNLARNPFSHRKVRGVTRSIREFF
SQSCELKYVGLSATKLPPQALRLLLQGLATNTRLCGLELDLSSCELRSAGAQVIQEHISE
ATAITSLDISDNGFENNMVTLILSLGRCHSLRHLALGRNFAMKSRALTDVLHRIAQLIQD
EECPLQSLSVCDSKLKTGMHILLSALGGHAALAQLDISGNNIGDTGAKMLSKALMNNSGL
RTLIWDRNSVTARGFQDVADALERNVTLQQVSLPLADITQSYRSSPDRTKEALHKIQQCL
NRNNQRQCDRVELRQMYRTQQFEKQVHGLCRQLEDSLKRLTHCSIQELQPDIVAAHEVLH
NAKESLKLLPSLYEAGRKWTSDGDLVNCILTDAATALTDEFTRSIQELAQGLMRSAEAVC
PRVVQRSSVVECVSESVSKRSRQTHTFLRNTLVDNAGKIISNRLRELRRTLSVSLAESIS
EQLQQDLKMAQDKIDCIIKENSCNQRNSIPELRLVDGDFPTDDYSPAFWRNSFHSKSLRP
APSIKSLLDADWEQQSRDRGAGDEGGGRSGLHWLPTATPLSVTASSPSLSPCTSPSPSPP
GRRGWRRGEGEAAALDAAAAISGARGASFIPPPSLPLLYSISAQAPVEAADRGGLPRREA
PFPGCGPSPGPLPGPGYPASPMEPLPTQGQTLRHYTASRPRPRRTHTQPPSSRPQEPVSK
VENEATEGMGRVDEGVEEFFTKKIIPDYALKGRWEESDSAQVTPSESSSTPSASTPFSSS
SDHITSYTTTVTSPSVPPTDTSFTSTDVPSLSTSSTPPTSSSVTSSTAPTTTTTTLPTKN
IKKKFGDFFAFKRARVGRAAKAGGGEGGGEAVKVKRTSIADLIRPLREAKERERERERDK
EREKERGTRSGEDANVSNDAATTEGTVATGQHLAGDARETVAPAKTLTTTTPPSETPPSY
PIIATTPDLTTATLSNAEEEAVTSLPDLPGRTPSPVVTSPLTEQERSSMLMKEMKMGGTP
YGERRLKVTKRSLREGKSQSLILLTGLEPEDKDNTHSKKHVSESTSSFEQRLQVMLHRMG
VAKTPPAETKSNQNKDEELRKANSEGAILDKPEPPPAYMKPRTMSTSSADPRHPMRGLDH
IRPDPPLYPKPAVPERPVGPLPPKPAVAAKPPIPTPSGPAGGGARPSSAPPSSSSAEGVQ
LRAHTHDGRRAESLTQNESQEGPRGAAPTPSPRKELLPPAPSPWRGPSTQDRSEKAQSVT
DESLPKPRQHLKPLPQRRAVSVHEDALAMTQELKAVLQRSPIRYRGNRGDLPTCTEDPTS
VWKTGKQAAEEKKEAGCRGTLDQSKHPPQEVSGFPSSAAQAQKEEASAPRLFSPTAAVDK
PPPTLEKPALTPTSHVKGPGSISSETLQRPQASPPPHRKKSPGTLAATADVGNSTQERGE
AVSKQHTTKAEPADQRTEPPLSE
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atggactccatctctcaaaacctccaagataagatctccgagctgctgaagcctcacaga
gtctgtctggtgaagcccatcattctaaatcaatccagtcagtcaagctccagatcagcc
aacaggtttctggtgctgagtctatggaggggttatctggttgtaaacaagcagcctgtc
agggtagagagcacgttcagcttcctggagatttgctccatcgacattcacagcctcaca
cagattgtgttggagacagacagaaagactctttctttcagtgtgttacacattgatgat
cttgaggccatggtcagtcacatgactggctcactgaagaggatcttccctgattcatct
ccagggaagctgttaaagacgattcctcctgaacttgagcagagactccacacactcacc
agtagaatagaggaggagctggatggtcaacctggatcctgtggaggattctctgatacc
tatgctgctctgtgtgacttcaacgagatgccgttcagagaggagattcagtgggatgtt
gacaacatctacaaaatgcacaagtggagacagttcaacctgcaggacttcagccactta
gatagcagggacttggcaatagcagtagcagctctgtctttcaaccagtggtttaccaag
atctacagcaaagaactcaaactgtcagtagacatccagcagcagctcaccttcctcctg
tccagatctcccggtctggaggaactctcactggaggccagcggactcaaactagacttt
gcaatcaaaatggccgcagcactgcgggatcacacctcctctacactgcaatccatcaac
ctctcaggcaatgcaattgaagacaaaggtgttatagcacttagtctggagttggagaat
ctagtcgagggactcaaatacctctctctgtcccgggtgtccatgacagcaagaggtctc
ggctgtctgagtcaggtgttatccaccaatcagctgttctcagtatctctgacccacctg
gatctgtctgataaccccggcagcctggttactgaagacgccacgtttctctttaagttc
ttgtccagtactaactctctgtctcatctggacctcagtgataccaactgccctctagac
acgttgtttgtgtctctgtctgttggatgttgttgcaaactaatgcacctgaacctggcc
aggaatcctttcagccacagaaaggttcggggggtgaccaggagcattcgagagttcttc
agtcagagctgtgagctcaaatatgtcggcctatctgcaaccaaactacctccacaagct
ctcaggttattactacagggtctggcaactaacactcgtctctgtgggctggagctggac
ctcagtagctgtgaacttcgctcagcaggagctcaggtgatacaggaacacatctctgaa
gctacagctattacaagtctggatatctctgataacggttttgagaacaacatggtgact
ctgattctgtctctgggtcgatgccactctctccgtcacctcgcactgggaagaaacttt
gctatgaagtccagagccctgactgatgttcttcatcgtatagctcagctcattcaggat
gaagagtgtcccctgcagtccctgtcagtgtgtgattccaagctgaaaacagggatgcac
atcctgctcagcgctctgggcggccacgctgctctggctcaactggacatcagtggaaac
aacatcggggacactggagctaaaatgctgtccaaggccctgatgaacaactcaggactg
aggactctgatatgggacagaaacagtgttactgccagaggtttccaggatgtggctgat
gctttggagaggaacgtcactctgcagcaggtttctctccctctggctgatatcacacag
agttaccgcagcagccccgacagaaccaaagaggctctgcacaagattcagcagtgttta
aacagaaacaaccagagacagtgtgacagagtggaactgcggcaaatgtacagaactcaa
cagtttgaaaagcaggtccacggtctgtgccggcagctggaggacagtctgaaacgtctg
acccactgcagcattcaggaactccagcctgacatcgtggcagctcatgaagtgctgcac
aatgccaaagagtctctgaagctgcttccctctctgtatgaggcgggcaggaagtggacc
tctgatggagacctggtgaactgcatcctgactgatgctgctactgcactgactgatgag
ttcactagaagcatacaggagctggctcaaggcctgatgaggagcgcggaggcagtctgt
ccacgagtggtccagagatcaagtgtggtcgagtgtgtgtcggagagtgtgtccaagaga
agcaggcagacacacacattcctcagaaacactctggtggataatgcggggaagatcatc
agcaacagactgcgtgaactgagacgaactctgagtgtctctctggctgaaagcatcagt
gaacagctgcaacaggatctgaaaatggcacaggacaaaatagattgtattatcaaagag
aattcatgcaatcagagaaacagcatcccagagctccgcctggtcgatggcgacttcccc
accgacgactacagtccagcattctggagaaatagtttccactcaaagagcctgaggcct
gctccttcaattaaaagtctcttggatgcagactgggagcagcagagcagggacagaggc
gccggagatgaaggaggaggaaggagtggcctccactggttgccgacagcaacccccctg
tcagtcacggcctcaagcccctccctgtccccttgcacctccccttccccctcccccccg
ggacggagggggtggaggcggggggagggggaggcggcagcgctggatgctgcagcggca
atatcaggagcgagaggagcatcgttcattcctcctcccagtctccccctcctttactcc
atctccgctcaagctccagtggaggctgccgaccgcggaggcttacccagacgagaggct
cccttccccggctgcggccccagcccaggccccctccctggccctggataccccgcttct
cccatggagcctctacccacccagggacagacactaaggcactacaccgcctcccgaccg
cggccacgacgcacacacacacagcccccctcctcaaggccccaggagccagtgtcaaaa
gtagagaatgaggccactgaggggatgggcagagtggatgaaggagtagaagagttcttc
accaagaaaatcatccctgactatgcactaaaaggccggtgggaggagtcagactctgcc
caagtcaccccctcagagtcaagctcaaccccctcagcctcaacccccttttcctcctcg
tccgaccatatcacctcctacaccaccactgtcacctccccctctgtccctccgaccgac
acatccttcacatccacggatgttccatccctctctacatcctccactccccccacttcc
tcttccgtcacctcgtccaccgctcccaccaccaccaccaccacacttcctaccaaaaac
atcaagaaaaagtttggcgacttcttcgctttcaagagggctcgagtcgggagagccgcc
aaggcaggagggggagagggaggaggagaggcggtgaaggtcaaaaggacctccattgca
gacctcattcgacccctccgagaggccaaagaaagggagagagagagggagagggacaag
gagagagagaaggagagagggacaagatcaggggaggatgctaacgtttctaatgatgcc
gccaccacagaaggaaccgttgccaccggccaacatcttgcaggcgatgcgagggaaacg
gtggcgcctgccaagacattaaccaccacgacacctcccagtgagacccctccctcatac
cccatcatcgccacaacccctgacctcaccaccgctacgctctcaaatgcggaagaagag
gcggtgacctcacttcctgacttgccaggccgaaccccgagtcccgtggtcacttcccct
ctgaccgagcaggagcggagcagcatgctgatgaaggagatgaagatgggagggactccg
tatggagagaggaggctgaaagtcaccaagaggtcactgagagagggcaagagccagagt
ctcatactgctgacgggattagagcccgaagacaaggataacacacacagtaagaagcat
gtatctgagagcacatctagttttgaacagaggctgcaggtgatgctgcacagaatgggc
gtggccaaaactccacctgcagaaaccaagtccaaccagaataaagacgaggagctgaga
aaagccaactctgagggtgctatcctggacaaacctgaaccacctcctgcatacatgaag
cccagaaccatgtctacatcatcagcagaccccaggcatccaatgagagggctggaccac
atccggccggaccctcccctttacccaaaacctgccgtccccgagcgtcccgttggcccc
ctgccacccaaacctgccgtcgcggccaagcctcccatcccgaccccgtctggtcccgca
ggaggaggagctcgtccctcctccgctcctccttccagcagctcagcagagggagtccag
ctcagagcacacacacatgatggcaggagagcagagagtcttacacagaatgaaagtcag
gaaggtccccggggtgcagctccaactccgtcccccaggaaagagctgcttcctccagcc
ccgtctccatggaggggtcccagcacacaggatcgctctgagaaagcacaatcagtgacc
gacgagagtcttcccaaaccacgccagcacctgaagcccctcccacaacggcgagctgtg
tccgtccatgaggacgctctggccatgacacaagagctgaaggctgtgttacaaaggtcg
cccatccgttaccggggcaacagaggggatctgcccacctgcaccgaagatccaaccagt
gtctggaaaacagggaagcaggcagctgaagaaaagaaggaggcaggctgcagagggacg
ctagatcaaagcaagcacccccctcaagaggtctctgggtttccctcctctgcagctcag
gctcagaaagaagaagcatcagcaccgagactcttcagtcccactgcagcagtcgataaa
cctccgccaaccctggaaaaacccgccctaacccccacatcccacgtcaagggccccggc
tcaatctcatccgaaaccctgcagcgcccccaagcgagccccccgccccacaggaagaag
agccccggcacgttagcggccacggcggacgtaggtaacagcacacaggagagaggagaa
gcggtctctaaacagcacacgacaaaggcagagccagcagaccaaagaactgagccccct
ctctctgaataa
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integrated database retrieval system
