Scomber scombrus (Atlantic mackerel): 133982045
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Entry
133982045 CDS
T10651
Symbol
det1
Name
(RefSeq) DET1 homolog
KO
K10571
de-etiolated-1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133982045 (det1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133982045 (det1)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
133982045 (det1)
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Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
133982045
NCBI-ProteinID:
XP_062276927
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Position
6:complement(28522076..28530929)
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AA seq
551 aa
AA seq
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MDDDTQTLKPRRIQNQNVVHRLERRRICSGRPGAHWYRVRCFHQNLFPNFTVVNVEKPPC
FLRKFSPDGRCFIAFSSDQTSLEIYEYQGCQAAQDLLRGQEGETLLTANDQRSLNIRGRL
FERFFSLLHVTNVASNGEHLNRECSLFTDDCRYVIVGSAVYVPEEPPPYFFEVYRNNESV
TPNPRSPLEDYSLHIIDLHTGRLCDTRSFKCDKIILSHNQGLYLYRNILAVLSVQQQTIH
VFQVTPEGTFLDVRTIGRFCYEDDLLTLSAVYTEAQAESQPGFPRLYTDKTINSLKHRLL
VYLWRRAEQDGSATAKRRFFQFFDQLRRLRMWKMQLLDEHHLFIKYTSEDVVTLRVTDPS
QPSFFVVYNMVSTEVLAVFENTSDQLLELFENFCDLFRNATLHSQAVQFPCSASSNNYAR
QVQRRFKDTIVNAKYGGHTEAVRRLLGQLPISAQSYSSSPYLDLSLFSYDDKWVSVMERP
KTCGDHPIRFYARDSGLLKFKIQAGLLGRPVNHAVRRLVAFTFHPFEPFAISVQRTNAEY
VVNFHMRHVCA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgacacccagactctgaagcctaggcggatccagaatcaaaacgtggtccat
cgtctcgagaggcgtcggatctgctcgggccgaccgggcgctcactggtaccgagtgcgc
tgcttccaccagaacctgttccctaacttcactgtagtcaacgtggagaagccgccctgc
tttcttaggaagttctcacccgacggacgctgcttcatcgcattctcctccgaccagacg
tctctggagatatacgaataccaaggttgtcaggcggcgcaggacctactgagaggccaa
gagggggagacccttttaacagccaacgaccagcgctccctcaacatccgaggtcgcctg
tttgagcgtttcttctccttgctccacgtcaccaatgtggcctcaaacggagaacacctc
aaccgggagtgcagcctgttcacagacgactgccggtacgtcatcgtcgggtcggctgtg
tacgtcccagaggagccgccgccgtacttctttgaggtgtatcgcaacaacgaatcggtg
actcctaaccctcggtctcctttagaagactactccctccacatcatcgacctccacacc
ggcaggctgtgcgacaccaggtcctttaagtgcgacaagattatcctttcccacaaccag
ggcctctacctctacagaaacatcctggccgtgctgtcggtccagcagcagaccatacac
gtctttcaggtgactccagagggaacgttcctggatgtaaggaccatcggacgcttctgc
tacgaggacgacctcctgacgctttcggctgtttacacggaggctcaggccgagagccag
ccgggcttcccgcgcctttacaccgacaaaaccatcaactccctcaagcacaggctgcta
gtctacctctggaggagggccgagcaggacggtagcgccaccgccaagaggagattcttc
cagttttttgatcagctgaggaggctgaggatgtggaagatgcaactgctggatgagcat
cacctcttcattaaatacaccagcgaagacgtggtcacactcagagtcaccgacccctcg
cagccgtcgttcttcgtggtgtacaacatggtgtccacagaggtgctggccgtctttgag
aacacttccgaccagctgctggagctgttcgagaacttctgcgacctgttccgaaacgca
acactacacagccaggccgtccagttcccctgctccgcctcatccaacaactacgctcgg
caggtccagagaagattcaaggacaccatagtgaacgctaagtacggcggccacaccgag
gcggtgcgtcggctgctgggccagctgccaatcagcgcccagtcctacagcagcagccct
tacctcgacctctccctcttcagctacgacgacaagtgggtgtccgtcatggagaggccc
aagacctgcggggaccatcccatcaggttttacgcacgtgactcaggcctgctgaagttt
aagatccaggcgggtctgctgggacggccggtgaaccacgctgtgcgtcgcctggtcgcc
ttcaccttccaccctttcgaacctttcgccatctcagtccagcgcaccaatgccgagtac
gtggtcaacttccacatgaggcacgtttgcgcgtga
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