Scomber scombrus (Atlantic mackerel): 133982100
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Entry
133982100 CDS
T10651
Symbol
hgfb
Name
(RefSeq) hepatocyte growth factor
KO
K05460
hepatocyte growth factor
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04010
MAPK signaling pathway
ssco04020
Calcium signaling pathway
ssco04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133982100 (hgfb)
04020 Calcium signaling pathway
133982100 (hgfb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133982100 (hgfb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ssco04052
]
133982100 (hgfb)
00536 Glycosaminoglycan binding proteins [BR:
ssco00536
]
133982100 (hgfb)
Cytokines and neuropeptides [BR:
ssco04052
]
Cytokines
Growth factors (RTK binding)
133982100 (hgfb)
Glycosaminoglycan binding proteins [BR:
ssco00536
]
Heparan sulfate / Heparin
Growth factors/receptors
133982100 (hgfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kringle
Trypsin
PAN_1
DUF5397
Motif
Other DBs
NCBI-GeneID:
133982100
NCBI-ProteinID:
XP_062277002
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All DBs
Position
6:complement(16156319..16178313)
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AA seq
712 aa
AA seq
DB search
MWIYNIVLLFVISCSEGRRNALQDYQKTDGVGLLVVSPDSTHLTKSRKLSMAKCAKACSR
NKRLPFTCRAFLYDHKNRKCQWLSFDRNSPGTQTQQDFNYQLYQKKDYVRECIVGTGQSY
RGRRSVTVSGILCQAWASPIPHEHKFMSKRFRKKDLRENYCRNPDNSTVGPWCFTTDPRP
HLRHQECGIPQCSQVECMNCNGEDYRGPMDHTESGKECQRWDLDEPHKHLYHPKRYPDKG
LDDNYCRNPDGRHRPWCFTTDPNTPWEYCNIKVCETPQKQNVVETTECYQGKGEGYRGTV
DVTPTGLTCQRWDSQYPHNHTFIPQAYPCKDLRENYCRNPDGQEFPWCFTTDPRVRTMFC
TNIPQCGAQNKPVSDCYESFGETYQGEQSRTRSNLPCAPWRDHSNSGERGILMAGLEGNY
CRNPDKDKHGPWCYTNNSAIPWDYCSVKPCDASQNTIPLGELSSVGCFVHKRTRIVGGGP
VRISDGSWMVSIQKGSMHWCGGSLIREEWVLTDRQCFSSCVPDLSEYQVWLGVSDIQEGA
PDWSKRQEVSIAHVICGPEGSSLALIRLSKPALPADNVHTIQLPVAGCSIRDGTICKMYG
WGETKGTGHDDVLKGVDLPIVSNERCREMHRGSLHITNTNICAGGKRNEGVCERDYGGPL
VCQDGDIRVIVGVSVHGRGCARANQPGIFINVPFYTQWIYKVFKYYPNPEIV
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtggatttacaatatcgttttactcttcgtcatttcttgttctgagggccgaagaaat
gcgctccaggactaccagaagactgatggcgtaggactgcttgttgtgtctcccgactct
acccacctgaccaaaagcagaaagctgagcatggctaagtgtgccaaagcttgcagccgc
aacaaaagattaccctttacatgcagagcatttctctatgatcataaaaacaggaaatgc
cagtggctgtcattcgacaggaactcaccaggaactcagacgcagcaagacttcaactac
caactctatcaaaagaaagactatgtcagagagtgcatcgtgggtacaggtcagagctac
agggggcggaggtcagtgacagtgagtgggatcctgtgccaagcctgggcctctcctatt
cctcatgagcacaaattcatgtctaagagattcaggaagaaggacctgagagaaaactac
tgtcgcaaccccgacaactccactgtcggaccgtggtgcttcaccactgacccccgaccc
cacctcagacaccaggagtgtggcataccacagtgttcacaggttgagtgtatgaactgt
aatggagaagattacagaggacccatggaccacacagagagtgggaaggaatgccagcgc
tgggaccttgatgaaccacacaaacacctgtaccatcccaagaggtatcctgacaaggga
ctggatgataactactgtcggaatccagacggacgccacagaccctggtgctttaccacg
gacccaaacacaccctgggaatactgcaacatcaaagtctgtgaaacacctcagaaacaa
aatgtggtggaaacaactgagtgctaccaaggcaaaggagaaggttacagggggacagta
gatgtgacgcctactggactcacctgccaacgctgggactctcagtatccccataaccac
acattcatacctcaagcctacccctgcaaggacctgagagagaactactgtcggaatcca
gatgggcaagaattcccctggtgcttcactaccgacccaagagtccgcacaatgttctgc
accaacatccctcaatgtggcgcccaaaacaagcctgttagtgactgctatgaaagcttt
ggggagacatatcaaggagagcagtcaaggactagatcaaaccttccctgtgctccctgg
agggaccacagcaacagcggtgagaggggcatactgatggctggcctggaaggaaactac
tgcagaaaccctgataaagataaacatggtccatggtgttataccaacaactctgcgata
ccctgggactactgcagtgtaaagccatgtgatgcttcacagaacaccattccattgggt
gagctgtcctctgtggggtgttttgttcataaaagaaccaggatcgtgggtggaggtcca
gtgagaatatcagacggcagctggatggtcagcatacagaaagggtccatgcactggtgt
ggggggtcactaatacgagaggagtgggtactcactgacagacagtgcttctcttcatgt
gttccagacctcagcgagtatcaggtgtggctgggagtctctgatattcaagagggcgct
cctgactggtccaagagacaggaagtcagcatagctcatgtgatatgtggcccagagggc
tccagtttagcccttataagactgtctaagcctgcccttcctgcagacaatgtccatacg
attcagctacctgtagctgggtgctccatccgagatggaacaatatgtaaaatgtacgga
tggggagagactaaaggcactggccatgatgacgtattaaaaggagttgacctgcccatt
gtcagtaatgagagatgcagagagatgcacagagggagcctccacatcaccaacaccaac
atctgtgcaggaggcaagaggaatgagggagtgtgtgagagggattatggcggacctctt
gtgtgtcaggacggtgacattcgggtaattgtgggagtgagtgtccatggcagaggctgc
gctcgggccaaccagcctggcatcttcatcaatgtgcccttttacacacagtggatctac
aaggtcttcaaatattaccctaatccagagattgtctag
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