Scomber scombrus (Atlantic mackerel): 133982106
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Entry
133982106 CDS
T10651
Symbol
si:dkeyp-19e1.3
Name
(RefSeq) proline-rich protein 36
KO
K20133
USP6 N-terminal-like protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133982106 (si:dkeyp-19e1.3)
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
133982106 (si:dkeyp-19e1.3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
133982106
NCBI-ProteinID:
XP_062277012
LinkDB
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Position
6:12054266..12074946
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AA seq
849 aa
AA seq
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MKKDIDTLIAEERTEIISKYDKGRQEGVSIDPWEDADYSIYKVTDRFGFLHEKELPTPSA
LEEKQKQQEIERVEKWLKMVKNWDKYRNSEKLVKRVYKGIPLQLRGQAWALLLDVDKVRA
ENEGKYEKMKLQARNYSTEIKQIDLDVNRTFRNHIMFMDRFGVKQQALFHVLAAYSVYNT
EVSYCQGMSQIAAILLMYLNEEDAFWALSQLLTNSKHAMHGFFIPGFPKLHRFQAHHELI
LSKMLPKLKKHLDKEQMTTGIYTTKWFLQCFIDRTPFTLTLRLWDIYILEGEKMLAAMAY
TTLKLHKKRLQKFQLEDLREFIQEQLAASFFLPDDVVVEQLQAAMSELRSKKLDQPPPAK
SEELPKKPLGQELPVLLMPLQPDSPLEVKINLQPHNQPNTEVMQTDSITLHQTPSPAEPQ
DSRSLFGANTPSLPSPDPVVVHTQETPSPRPCRAPPLPPQAEQPCAEIEVKESVPEVSQT
EDRESQPGNPEIRGEPMDWPPPYVPPALDVLTMQTEEEIMDLPDLPPPPLFCTDQDDQCL
GAGTGPQTQRRSPSPRSASPLVTQIKLSPQIRPKPPTSLDLTQNKPLPPKTSIPSKPSLS
SKPSLSSKPSLPSKPSFPSKPPPPCAFTTSSSSSPRGPPPKPNKFPVSLYVPVHPGDRRP
SNTSQYDNLSEADEEDRYLERLLGSTPEEDLSMHCNPPPAIDRDYDPTLYPLPPPPVFIR
PSPSSIPPSLCTLPSLPQEPEYVGEDTWVEDSIIPSPPPSFADRLSPFQGSTAGCSDTHR
ATSPSYSKPFTRGPRDHSAFPAPLLYTGSPPGHSRHSGQSAGGVPMVQSSPDFCRIPPGG
QQLPKSVTF
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggacatagacacattgatagcagaggaacgcactgagatcatctccaaatat
gacaagggcaggcaagagggtgtcagcattgacccatgggaggatgctgactacagcatc
tataaagtcactgaccgcttcggcttcctgcatgagaaagagctgccaacacccagtgca
cttgaagagaagcaaaagcagcaggagatcgagcgagtggagaaatggctaaagatggtg
aagaactgggacaagtataggaacagtgaaaagttggtgaagcgtgtgtataaaggcatc
cctctccagctgagaggccaggcctgggccttgcttttggacgtagataaagtcagagca
gaaaacgaaggaaagtatgagaaaatgaagctgcaggcacgcaactactccacagagata
aaacagatagacttagatgtcaacaggacctttagaaaccacatcatgttcatggaccgc
tttggagtcaagcaacaggcactgtttcacgtactagcagcctactcagtttacaacacg
gaggtgagctactgccaggggatgagtcagattgctgccatcttgctcatgtacttgaat
gaggaagatgccttctgggctctgtctcagctccttaccaacagcaagcatgccatgcac
ggcttcttcatcccaggatttcccaagctgcatcgtttccaggcccaccacgagctgatc
ctctccaaaatgctgcctaagctgaagaaacacctggacaaggaacagatgacaacaggg
atttacaccaccaaatggtttctccagtgcttcattgacagaacccctttcaccctcacc
ctgcgtttatgggacatctacatactggagggagagaagatgttagctgccatggcttat
acaaccctcaagttacacaagaagcgcctgcagaagtttcagttggaggacctgagggag
tttattcaggagcagctggctgcttctttcttcctgcctgatgatgtggtggttgaacag
ttacaggctgccatgtctgagctacgcagcaaaaagttggaccaacctcccccagctaag
tcagaagagctgccaaagaaacctctaggtcaagagctaccagtgcttctaatgcctcta
cagcctgactcacctctggaagtcaaaataaatctgcagcctcacaaccagcccaataca
gaggtgatgcaaacagatagcatcactctacaccagaccccgtctcctgctgagccccag
gactcgagaagcctttttggggcaaacacaccttctttgccttcaccggatccagttgta
gtgcacacacaagaaacgccgtctcccaggccttgtagggcacctccattacctccgcaa
gcagagcagccctgtgctgagatagaagtgaaggagtcggtcccagaagttagtcagact
gaagatagggagagccagcctggaaacccagagattcggggagagcctatggattggcct
ccaccctatgtgccccctgctttggatgttcttacaatgcagactgaggaggagatcatg
gaccttccagatctgccacctccacctttattttgcactgaccaggatgaccaatgtcta
ggagctgggactggaccgcagacccagcgccgctctccttccccacgttctgcctccccg
ctggtcactcaaatcaagctatctccacaaatacgcccaaaaccccccacatcactcgac
ctcacccagaacaaacctcttcccccaaagacttccattccctcaaagccttctctttcc
tcaaagccttctctttcctcaaagccttctcttccctcaaaaccttcttttccctcaaaa
cctccccctccctgtgccttcaccacatcctcctcctcttctcccaggggccctccccca
aagccaaacaagttcccagtctctctttatgtcccagtgcatccaggagacaggcggcct
tccaacacctcccagtatgacaacctgtctgaagctgatgaggaagatcgctacctggag
aggttgctgggctctacacccgaggaggatctcagcatgcactgcaatccaccacctgcc
attgacagagactatgaccccactctctaccctctgcctccacctcctgtgttcatccgc
ccttccccatcttccattcctccctcgctgtgcactctaccgagtttgcctcaggagccg
gaatatgtaggagaggacacctgggtggaggactctatcatcccctctcctccacctagt
tttgctgacagactcagtcccttccagggtagtactgccggctgttcagacacacacaga
gccacttcacccagttactctaagcctttcaccaggggccccagggaccattctgccttc
cccgcacctctgttgtacaccgggtctccccctggccactccaggcactcaggacagtct
gcaggaggggtacctatggtccaatctagcccagacttttgcaggattcctccaggtgga
cagcagctgcctaaatcagtgaccttttaa
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