Scomber scombrus (Atlantic mackerel): 133982207
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Entry
133982207 CDS
T10651
Symbol
smpd3
Name
(RefSeq) sphingomyelin phosphodiesterase 3
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00600
Sphingolipid metabolism
ssco01100
Metabolic pathways
Brite
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
133982207 (smpd3)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
133982207
NCBI-ProteinID:
XP_062277141
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All DBs
Position
6:complement(9641080..9670335)
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AA seq
724 aa
AA seq
DB search
MVLHITPYSSACLHFLDGLSWSLVFPCYWLLDRLLASCVATSLEKRQRSQDPCSFLTLCV
LIAAPLYLLLVLASLPFALLGFIIWAPLQAIRQPYLYTYCRPDKSQAEQGQAGPGGVGVG
EWRPQGRSFCFSSANVCLLPDSLARFNNLSDTHRRACEVGKRIRNGASRPQIKIYIDSPT
NTSISAASFSSLATGFRRTSSLDHRPDQTHTTNGPADTETEVLTECPIHPSGATNCPVHP
TVGDQGSSECPLHSDGADTPADCPLHTAGANNSSDCPVHISGEAPDCPMHSTGPQIGSGH
HDCPMHGEGTQPKPSSDCPLHTSGVQISISAPEPDPQEEEAETGNHRPGEQAGGDTGSMT
ASRESLARYHGGDGGGVISSNNTLSHVPRTSIFKRPGRKRRHGDETFDHEISAFFPANLD
FLALQEVFDHGSTTRLRRQLHRYFPYVLSDVGRYGWKGCCSRFKFLNSGLMLASRYPILD
ARYECYPNGRGEDALAAKGALFAKVHVGTSHQEQRVVGYLTCTHLHAIEGDASVRCEQLD
LLLQWGAEFRQSSSQSPEGEKVLEDLVAFDVILGDLNFDNCSSEDKLEQQHALFTQYKDP
CRLGPGEDKPWALGTLLDTSGLYDDEVSSPESLQKVMENEEGRKEYLVFPPSKSQCPASS
QKGRKIPLKGNGRRIDYILYSDESLQQDWKLDIEEFSFVTQLAGLTDHLSVAMRLAVSTG
EEEP
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggtcctccacatcaccccttactccagtgcctgtctgcacttcctggatggcttgtca
tggagcctggtgttcccctgctactggctcctggaccggctcctggcctcctgtgtagcc
acctcgctggagaagcgacagcgctcccaggacccctgctccttcctcaccctgtgtgtc
ctgatcgccgcacccctctacctgctcctcgtcctcgcctccctgccttttgcactgctg
ggctttatcatctgggctcctttgcaggccatccgccagccctacctttacacctactgc
agaccagacaagagccaggccgagcagggccaggcaggaccggggggtgtcggggttggg
gaatggaggccccagggcaggagcttctgttttagcagcgccaacgtttgcctgctacct
gactcgctggctaggttcaacaacctgtcagacacccacaggagagcctgtgaggtggga
aagaggatccgcaatggtgccagtcggcctcagataaaaatctacatcgactcacctacc
aacacttcaatcagcgcggcatctttcagcagcctggccacaggtttccgccgtacctcc
tctctagaccatcgtccagaccaaacacataccaccaatggcccagccgatactgaaact
gaagtcctcaccgagtgcccaattcacccctcaggtgccacgaactgccctgttcaccct
actgtaggagaccaggggtcctctgaatgccctcttcactcagatggagcagacactcca
gcagactgccccctccacaccgcgggggccaacaacagctcagactgtcccgttcacatc
tcaggggaggctccagactgcccgatgcattccacagggccccagattgggtcaggccat
cacgactgccccatgcatggggaagggacccagccaaaaccttcctcagactgtcctctt
cacacctcaggggttcaaatcagcatcagtgccccagagccagaccctcaggaggaggag
gctgagacagggaaccatcggcctggggagcaggctgggggagatacaggcagcatgact
gcctcgagggaatcccttgctcgttaccatggaggtgacggaggcggagtgatatcctcc
aacaacaccctctctcacgtcccacgcacatcaatctttaagcgcccaggacgaaaacgc
cgccatggagacgagacattcgaccatgagatctctgcctttttccctgccaacttggat
ttcctggccctacaggaagtgtttgaccatggatcgacaactagactgcggcggcagttg
caccgctacttcccctacgtgctaagtgatgttgggcggtatggctggaaaggctgctgc
tccaggttcaaattcctgaacagtggactgatgctggccagccgctacccgatcctggat
gcacgctacgagtgctaccccaacgggagaggggaggacgcattggcagccaaaggagca
ctgtttgccaaggttcacgtgggcacttcccatcaggagcaaagggttgtgggatatctc
acgtgtacacacctccacgccatagaaggtgatgcttctgtgcgatgtgagcagctggac
ctgttgctccagtggggtgccgagtttcgccaatcctcatcacaatcacctgagggagag
aaggtgctggaagacctggtggcctttgatgtcatcctgggagacctcaactttgacaac
tgctcttcagaggacaagctggagcagcagcatgcactttttactcaatacaaggaccca
tgtcgcctggggccaggggaggacaaaccatgggctctgggtacactactggataccagt
ggcctttatgatgatgaggtcagttcaccggaaagtttacaaaaagtgatggagaatgaa
gaggggaggaaggagtacctggtgtttcctcccagtaagagccagtgtcccgccagcagt
cagaaggggaggaagatcccactgaagggcaatggacgccggattgactacatcctgtac
agcgatgagagcctgcagcaggactggaaactggatatcgaagagttcagctttgtaacc
cagttggccggcctgaccgaccatctgtctgtggccatgcgattggctgtgtccaccggg
gaagaggagccttag
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integrated database retrieval system
