Scomber scombrus (Atlantic mackerel): 133982218
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Entry
133982218 CDS
T10651
Name
(RefSeq) caldesmon-like
KO
K12327
caldesmon
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
133982218
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133982218
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
133982218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
133982218
NCBI-ProteinID:
XP_062277159
LinkDB
All DBs
Position
6:complement(21843243..21874336)
Genome browser
AA seq
717 aa
AA seq
DB search
MDDDFDRRMEQRRQRREQMRLDTEKGGIANDDDEEEARERRRRAREERKKMKDPEDCETG
DVINTNSVTETESSTTTTTTAPEGTDDDEALLERLAKREERRKRRMQEAMERQKELDPTI
GTTNGTDSTLEEQSSISSSRQQHTEEEEQKEEEKPSQEEVADAETNSWRKEEEDKKEEEK
EEAEQPDLAKKDVEEEAVPDVDKEEEERKRKEEEEIQQKEKEEKLRTEEEERQKQEKLKK
EEEERQLKEEEERKKRAEDEKRQKELEESLRKEEEEKQKRGMDESKKKEEEEKQKKEMEE
KKKKEEEEKHKKELEEKRKKEEDEKLKKKELEEKKKKEEEEKRKKEMEEKKKEEEEKRKK
EVEEKKKKEEEDKRKKKEVEEKKKKDEEEKLKKFGFKEKNEPNQTKQNGALIENKLKKTE
KTSRDSAPSSSLSKAEVERQEAERKLLELKRRRNDAESEEFEKMKQKQQGAEAELEELKK
KREERKKILEEEEKQKKQELEDKKAKEQEERKRMKEEIEKRRAEAAEKKKQKEDESVKIS
FTVSPKGSSKIGEKAEFLSKSAQKSTPRVSHTPIVSKIGNRMEQYTSAIQGNKEVGKSPK
SPMVDIPTGGTRSIKSMWEKGNVGSSSESPSPANKDLAGIKGGVAGRVNSWMAKPPEAEK
TTPAPAAPAASTAKPADVKPGDVGNKRGMWQTKKSSTPAKVPVEVKSKFVTNAGVRP
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgactttgatcgccgcatggagcagaggaggcagaggagagagcagatgcgc
ctcgatactgaaaagggcgggatcgccaatgatgacgatgaggaagaagctcgggagcga
aggagacgagcaagggaggagaggaagaagatgaaggacccggaggattgtgaaactggg
gatgtgatcaacactaacagtgtgacagagactgaatcctccaccaccaccaccaccact
gctcctgaggggacagatgatgacgaggctttgctggagcgccttgccaagagggaggag
cgcaggaagaggagaatgcaggaggccatggaaagacagaaggaactcgaccccaccatt
ggcaccaccaacggcacagatagcacactcgaagagcagtcctccatcagcagcagcaga
cagcaacacacagaggaagaggagcaaaaagaggaggagaaaccatcccaagaggaggtg
gcagatgccgagactaactcctggaggaaagaggaagaagacaagaaggaggaggagaag
gaggaagctgagcagcctgatttagcaaagaaagatgtggaagaggaggctgttcctgat
gttgataaggaggaagaagaaaggaaaaggaaagaagaagaggagatacagcagaaagaa
aaggaagaaaagctgaggacagaggaagaggaaaggcaaaaacaggaaaagctcaaaaag
gaagaagaagaaaggcagctaaaggaggaggaggaaagaaagaagagagcagaagatgaa
aaacgacaaaaggaattggaagagagcctgagaaaagaggaagaagaaaaacagaagagg
ggaatggatgaaagcaagaaaaaagaagaagaggaaaaacagaaaaaggagatggaggaa
aagaagaagaaagaagaggaggaaaaacacaagaaagaattggaagagaagaggaaaaag
gaggaggatgaaaagctgaagaagaaagagctggaggagaagaagaagaaagaggaggag
gagaaacggaaaaaggagatggaagaaaagaagaaagaagaggaggagaagcggaaaaag
gaggttgaagagaagaaaaagaaagaggaggaggacaagcgcaaaaagaaagaggtggaa
gagaagaagaagaaagacgaggaggagaagctgaagaaatttgggttcaaagaaaagaat
gaaccaaaccaaaccaaacagaacggagccctcattgagaataaactcaagaaaacagag
aagacatcaagggacagcgctccctcctcctccctctctaaagcagaggtggagcgacag
gaagctgagcgtaagttgctggagctgaaacgccggcgaaacgatgcagaaagcgaagaa
tttgaaaagatgaagcagaagcagcagggtgcggaggctgagctggaggagctgaagaag
aagagagaggagaggaagaagatcctagaggaggaggagaagcagaagaaacaggagctg
gaggacaagaaagccaaagaacaggaggagaggaagaggatgaaggaggagatagagaag
aggagggcggaggcggcagagaagaagaagcagaaggaggacgagtctgtcaaaattagc
ttcactgtcagtcccaagggctcctctaagatcggggaaaaagcagaattcttgagcaaa
tcagctcagaaaagcacacccagagtgtcacatactccaattgtctccaagataggcaac
agaatggaacagtacacttctgccatccagggaaacaaagaagtgggcaagtcccccaag
tctcccatggtagatattccaacaggaggcactcgcagcatcaagagcatgtgggagaaa
ggcaacgttggcagctcctctgaaagtccatcccctgcaaataaggacttggccggtatc
aaaggaggcgttgctggacgtgtcaacagttggatggcaaagcctccagaggcggagaag
acaacaccggcaccagcagcaccagcagcatcaacagcaaagcccgcagatgtgaaacca
ggtgacgttggtaacaagcgtggcatgtggcaaaccaagaagagctctacacctgccaag
gtgccagttgaagtcaagagcaagttcgtcactaatgcaggcgtgagaccctaa
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