Scomber scombrus (Atlantic mackerel): 133982243
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Entry
133982243 CDS
T10651
Symbol
spi1a
Name
(RefSeq) transcription factor PU.1a
KO
K09438
transcription factor PU.1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133982243 (spi1a)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
133982243 (spi1a)
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Gene cluster
GFIT
Motif
Pfam:
Ets
DUF5463
Motif
Other DBs
NCBI-GeneID:
133982243
NCBI-ProteinID:
XP_062277195
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Position
6:complement(23932007..23935449)
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AA seq
260 aa
AA seq
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MMDGYVISSASEEMISNEPENYRPPTELYPYLTNVGEIYEDHRWAFHSERVQPTDFDHSP
VNHLTELQAVSPQLLTQPYRFSSESLPLHLDPPLAPLSVSPQIPYYTSSLCYQYQPSASP
AQYYSEEEQRGISPPLEVSEGEDDFEDHSHPSLRKDTNNKKKIRLYQFLLDLLRNGDMSD
SIWWVDQDKGIFQFSTKHKEVLANRWGLQKGNRKKMTYQKMARALRNYGKTGEIKKVKKK
LTYQFSEEVLRNIYIRQYTH
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgatggacggatatgtcatatcatctgcttcagaggaaatgatttcaaatgagccagag
aattatcggccacccacagagctgtacccctacctcaccaatgtgggggaaatctatgaa
gaccatagatgggccttccactcagagcgtgtccagccgactgattttgaccactctcca
gtaaatcacctcacagagcttcaggctgtgtctccgcaactgctgacgcaaccctaccgc
ttcagcagcgagtcgctgcccctccacctggatccaccactcgcacctctctctgtgtca
ccacaaatcccatattacacctcctccctgtgctaccaataccaaccctctgcctcgcct
gcacaatactactcagaggaggaacaaagaggaattagccccccgcttgaggtatcagaa
ggggaggatgactttgaagaccacagccacccctccttaaggaaagacactaataacaag
aagaaaatccgcttgtaccagttcctcttggacttgcttagaaacggtgacatgagtgac
agcatctggtgggtcgaccaggacaagggcatcttccagttctccacaaaacacaaagaa
gttctggcgaaccgctggggtcttcagaaaggaaaccggaaaaaaatgacctaccaaaaa
atggctcgggcattgaggaactatggtaaaactggagagattaaaaaagtaaagaagaag
ctaacctaccagttcagtgaggaagttctgaggaacatctatatacgtcagtatactcac
tga
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