Scomber scombrus (Atlantic mackerel): 133982307
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Entry
133982307 CDS
T10651
Symbol
tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6 isoform X1
KO
K16573
gamma-tubulin complex component 6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133982307 (tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133982307 (tubgcp6)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
133982307 (tubgcp6)
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
133982307 (tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
GCP5-Mod21_C
Anti-LPS-SCYG
AAA_23
Motif
Other DBs
NCBI-GeneID:
133982307
NCBI-ProteinID:
XP_062277272
LinkDB
All DBs
Position
6:20889800..20913594
Genome browser
AA seq
1840 aa
AA seq
DB search
MYSSPNIKPSCNSSSITELLGALCECSLSGVSWKRRALGGVSRETFRRALKKRAYGALLS
KLFQDGTKASASGPSAMANTPPRNKVLMICFDLRVAGCREEAERLEEQLERLTEGASSGL
KEVDSVLELLLHLAGSAPPPPTSFSRDYMRRERPVLRRPQPWSYQSEELQRLEARAWGLV
CGEEWGTLESLCGTQRLMDGPPGTGLLTLKTKMDVEERFEKETRLTLFGALQHTRTSDID
IRLDLPPVPSNIDVTGLAIRVPHCLDQSEDEGFQSSSNLTPDSQSEPSPSPELDLWEALR
TFEPGKRRCWESVGCPPGKRESLYLTEGGREAFDKLYQLWEGEIRVVSTSTPSPVLPLPL
DSQSQLVSDLLNMLIGVASTTFPLNQSVQFDVRPGVCVSGASAESVSRLLGELAQYGTYY
LRLSRFSLQNTDKKGLVFQAFTGGLRKYLHYYRACVLSTPHTLSLLTIGFLLRKVGRQLR
YLSELCCVDGPLGAGQATFPVGVKLLSYLYNEAQNNCSNENYPVLLSLLKSSCEPYTRFV
SDWVYSGVFRDVYGEFMIQVNEDYLSFRDKHFWVQGYTLHTKDVEDCVPIFLRHIANDVY
VCGKTINLLKICYPQHYICWSELPMPRIAVTFSLQELEEIERDCAVYRGRMERIAKHSAI
SREEQALRTEQARQELINQVRESAAKTLESIRGRQVSQRLAEEAKKRERFEELKQHLEQE
QEWRSAAKKEQQEDDFSFARELRDREKRLQALEEQLEQRARKELIDQYSHLSEEAARRER
RAMWRVQRMRLDDARAQFFKHDMQQMQAILEKYPFGQKRPPIDILPTQQATPQSTLETLT
QGSSEQQPAETQECEAASPQHDPSSPTLNPLAVDPAFISEDIDINDFLAKSPNPDGQQVD
AALQEIGSDLPEACLSTQLVEYDFSAPFSPLEGITGQASVQPRPRWGPAVQPDLIQNHPS
FSHIPIGENMSQIQESFPKASLFGQASKSSFPLGQYTPEEPQNTLKASVNGQPSQASVQL
VDRSGSMTDNKQEKVPVVEQETETGILESKVEANMDDNTKEHGVVDTVPSTTPEQGDKGN
GAHKVMTDLSDGGGIETLMVNTQDHNLDAQDKVEIVSSSSVHGHSFDAHINVGQYISEVS
APLPTSNIHGHASDSHIKIGEYVSEVDAPLPSTSVHGHSSNSHIKIGEHVSDIVAFLPSP
SIHGHTSDAHIKVGENVSEVVVPLPAPSIHGHSSDANIKVGEFVSNVPEARPRWNKHGHT
SDCILQPGCVVSGTEPALSSLPGSSYGHSSDSKLGVGCVVSGQETKHPPLPGSAHGHTSD
SSLGVGCVVSKTDPLPSPLPGSIYGHSSDSTLGGGCVVLGMGMEPQQTALPGSGYGHSSD
SSLGVGCVVKGKSKGDQHKTEDSEASKGPKSESPGEQLVEATGSWAAGFGLSPGEKSEQE
YLYALSCQYQVEHYEDCYNLMASSPECQLLKQVTRGPWGLPMDPTLRRPTDTTAVQLSEM
VSLPVLIKNSVTTPLITHVSLVNKAVVDYFFVELRVERHFEALRHFLLMEDGEFAQSLSD
LLFEKLGSGQTPGELLTPLVLNSILSKALQYSLHGDTPLAGNFTFALRFLPETFHPHAPD
SLNCLELRYKVDWPLNIIITDSCMNKYNRLFSFLLQLKHMVWSLRDVWFHLKRTALVKGA
GRSVQFHQLQLYRHEMQHFVKVIQGYIANQILQVSWSEFTAKLATASDLDAIHRTHADYL
NRAIFRGLLTEKAAPVMNIIHSIFSLILKFRAQLIAQPWDSHQGEAVHPSFIAMQQSYNT
FKYYSHFLFKVVTKLVNRGYQPHLEDFLLRINFNNYYKDS
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgtattcaagccccaacataaagcccagctgcaacagcagcagcatcactgagcttctg
ggtgccctgtgtgaatgtagcctctctggggtgtcatggaagcgtcgtgccctgggagga
gtctccagagagactttccgcagagctctaaagaagcgtgcctatggtgccctgctgtcc
aagctatttcaagatggcaccaaagcgtccgcctcagggccaagtgccatggctaataca
ccacccagaaacaaagtcctgatgatatgttttgacttgcgggtggcagggtgccgagag
gaagcagagaggctggaagagcagctggagaggttgacagagggagcatcttctggtctg
aaggaggtagactcagtcctggagctcctgttgcatctagctggctctgcacctccaccc
ccgacctctttcagcagggactacatgagacgagagaggcctgtgctgcgccggcctcag
ccctggagctaccagagcgaggagctgcagaggctagaggcgcgggcatggggactagtg
tgcggggaggaatgggggactttggagagtttgtgtggaactcagagattgatggatggc
ccaccgggcacagggctgctcactctaaagactaaaatggatgtggaagaaagatttgag
aaggagaccaggctgacactgtttggagcactgcagcacactcgtacctcagacatagac
ataagactggacctgcctcctgttcctagtaatattgatgtaactgggctcgctatcaga
gtccctcactgtttagatcagtctgaggatgagggcttccagtcatcgtccaatctgacc
ccagactctcagtcagagcccagccccagtccagagcttgatttatgggaggccctccgg
acgtttgagcctggaaagcggcgctgctgggaatctgttggctgcccaccagggaaaagg
gagtctctctatctaacagaaggaggcagggaggcatttgacaagctttatcaactatgg
gagggggagattagggtggtcagcacgagtacgccctctcctgtcctcccactgccccta
gactctcagtcacaactagtatctgacctcctcaacatgttgatcggagtggcatccacg
accttccctctcaaccagagtgttcagtttgatgtcagacctggtgtgtgcgtgtcagga
gcctctgcagagagtgtgtctcgtctcttgggagagctggcccaatatggcacctactac
ttgaggcttagtcgcttttctttacagaatactgacaagaagggcctggtcttccaggct
tttacaggtggtctgaggaagtacctgcattactacagagcttgtgttctcagcacgcca
cacaccctcagccttctgactatcggcttcctcctccgcaaagtgggccggcagctcagg
tacctgtcagaactctgctgtgtagatgggcctctgggtgccggccaggctaccttccct
gtgggtgttaaattgctgtcctacctgtacaatgaagcacagaataactgcagcaacgag
aactatccggtcctgctgtcgctgctgaagagcagctgtgaaccctatacacggtttgtg
tctgactgggtgtatagcggtgtttttcgggatgtttatggagaattcatgatacaagta
aatgaagattacctcagcttcagagacaaacacttctgggttcaaggctacactcttcac
acaaaagatgtggaggattgtgtgcccatcttcctgagacacatcgccaatgacgtgtat
gtctgcggaaagaccatcaacctcctcaaaatctgctacccacagcactacatctgctgg
tcggagctgcctatgcctcgcattgctgtcaccttctctctgcaggagttggaggagatt
gagagggactgtgcagtgtaccgtggacgtatggagaggattgctaagcacagcgccatc
agcagggaggagcaagccctgagaacagagcaggcacgccaggagctgatcaatcaggtc
agagagtcagcagccaaaaccctggagagcatccgcgggcgccaggtgtcacaacgtctg
gctgaggaggccaagaagagggagcgttttgaggagctgaaacagcacctggagcaggag
caagagtggcgaagtgcagccaagaaggagcagcaggaggatgacttcagctttgccaga
gagctgagggacagagagaagagactacaagccctggaagagcaactggagcagagagcc
aggaaggagctgatcgatcagtacagccatctgtcagaggaagcagctcgcagagagaga
cgggccatgtggagggtgcagcgaatgagactggatgatgctcgtgctcagttcttcaaa
catgacatgcagcagatgcaggcaatattagagaaatatccctttggccagaagagacct
cccattgacatattgccaacacaacaggctacaccacaatcaacactggaaactctcact
caggggtcgtctgaacagcagccagcggagactcaagaatgtgaagctgcatcaccacaa
catgacccgtcttcccctaccctcaacccccttgctgtagaccccgcattcatttctgaa
gacattgacatcaatgacttcctcgccaagtcaccgaatcctgacggtcagcaggtggac
gcagccctacaggagattggctctgacctacctgaggcctgtctgtcaacacagcttgta
gaatatgacttcagtgccccctttagtccacttgaaggtatcactggacaagcctcagtt
cagcccagaccacgctggggacctgcagttcagcctgacttgatccaaaaccatccgtct
ttttctcacatccccattggagagaatatgtctcaaatccaggagagtttcccaaaagcc
agcctctttggtcaagcctccaaatccagctttcctctaggccagtacaccccagaggaa
ccccaaaatacattgaaagcaagtgttaatggacagccctctcaagcctcagttcaacta
gtagacaggagtggctcgatgacagacaacaagcaagaaaaagtacctgttgtagaacag
gagactgaaacagggattttggaaagtaaagtagaggcaaatatggatgataatacaaaa
gaacatggtgtggttgatactgttccttctactacaccagagcaaggcgacaagggtaat
ggtgctcacaaagtaatgacagatctttctgacggtggtgggattgaaacactaatggta
aacactcaagaccacaacttggatgctcaagataaagttgagatcgtttcttcatccagc
gtccatggacattcttttgatgctcacattaatgttggacagtatatatcagaggtatct
gcaccactaccaacctctaacatccatggtcacgcgtcagattcacacatcaagattgga
gaatatgtttcggaagttgatgctcctctaccttccaccagtgttcacggtcactcgtct
aattcccacattaaaattggtgaacatgtttcagatattgttgcctttctaccctcccct
agcattcatggtcacacatcagatgcccacatcaaagttggggaaaatgtttcagaagtt
gttgtaccacttcctgctccaagtatccacggtcactcctctgatgctaatataaaagtg
ggcgagtttgtgtccaacgtacctgaagcaagacctcgttggaataagcatgggcatacc
tcagattgcatccttcaaccagggtgtgtggtgtcaggaactgaaccagctttgtcctct
ttacctggaagctcttacggtcattcctcagactctaagttaggtgttggatgtgtggtt
tcaggacaggaaacaaagcatcctcctcttcccggcagtgcccatggccatacctcggac
tcaagtttaggtgttggatgtgtagtgtccaaaaccgatccacttccatcaccgctacca
ggcagcatctacggccactcttctgattcaacactggggggcggatgtgtggtgttgggg
atggggatggagccacaacaaactgcgctgccaggcagcggttacggccactcatcagat
tcttcacttggagttggatgtgtggtgaaggggaaaagcaaaggagatcaacataaaaca
gaggacagtgaagcaagtaaaggtcccaagtccgagagccctggtgagcagctggttgag
gccacagggtcctgggcagctggctttggtttgtcccctggagaaaagtccgagcaggag
tatctatatgctttgtcttgccagtaccaggtggaacactatgaagactgctacaacctt
atggcttcgtctccagagtgtcagcttctgaagcaggtaactcgtggcccctggggcctt
cctatggaccccacactgcgcagacccacagacaccactgctgtccagctcagcgagatg
gtttcactgccagttctgataaaaaactctgtcactacgccgctcatcacacatgtatcc
ttggtgaataaggcagtggtggactacttctttgtggagctaagggtggaaagacacttt
gaggcgctgcgccacttcctgctgatggaggatggcgagttcgcacagtccctcagcgat
ctactgtttgaaaagctgggcagtggccagactcccggtgagctgctgacccctctggtc
ctgaactccatcctcagtaaagccctgcagtacagtttacatggggacacccccttggct
ggcaacttcaccttcgccctgcgcttcctgccagagactttccaccctcacgcgcccgat
tctctcaactgtctggagctacgctacaaggtggactggccgttgaacatcatcatcaca
gacagctgcatgaacaagtacaaccgtctgttctcgttcctgttgcagctcaaacacatg
gtgtggagcctccgtgatgtctggttccacctcaagagaacagcgctggtgaaaggtgca
ggtcgctcggtgcagttccatcagctgcagctttaccggcacgagatgcaacactttgtc
aaggtaatacagggatacatcgccaatcagatcctgcaagtgtcctggagtgagttcaca
gccaagcttgctaccgccagcgacctggacgccatccaccgaacacacgcagactacctc
aacagagccatcttcaggggtttgctgacagagaaagcggctccggtcatgaacatcatc
cacagcatcttcagcctgatcctgaagtttcgtgcccagctgatcgcacagccctgggac
agccatcagggggaggcagtgcaccccagcttcattgccatgcagcagtcgtacaacacc
ttcaagtattactctcacttccttttcaaagtggtgaccaagctggtgaacagaggctac
cagcctcatttagaggatttcctccttcgcatcaacttcaacaactactacaaagactcc
tga
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