Scomber scombrus (Atlantic mackerel): 133982321
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Entry
133982321 CDS
T10651
Symbol
rapsn
Name
(RefSeq) 43 kDa receptor-associated protein of the synapse isoform X1
KO
K24924
receptor-associated protein of the synapse
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
133982321 (rapsn)
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
133982321 (rapsn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rapsyn_N
TPR_12
TPR_2
TPR_1
TPR_8
SNAP
TPR_MalT
zf-RING_11
TPR_19
TPR_10
zf-RING_2
DUF3856
TPR_11
ARM_TT21_4th
zf-RING_5
PHDvar_NSD
Prok-RING_4
zf-rbx1
zf-RING_Vps41
Cys_rich_CPXG
Motif
Other DBs
NCBI-GeneID:
133982321
NCBI-ProteinID:
XP_062277298
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Position
6:23792663..23797179
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AA seq
423 aa
AA seq
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MNIFMRRLVPEMGQDQTKHQIEKGLRLYQSNQTEKALHVWTKVLEKTSDPGGKFRVLGCL
ITAHSEMGKYKDMLKYALNQIDTAREMEDPDYLTEGYLNLARSNEKLCDFQKTVSYCKTC
LNMQGTTVSLQLNGQVCLSMGNAFLGLSVFQKALESYEKALRYAHNNDDKMLECRVCCSL
GNIYVQLKDYEKALFFPCKAAELVNDYGKGWSLKYRAMSQYHMSVAYRKLERLADAMECC
EESMKIALQHGDRPLQALCLQNFADIHRCRHDVDKAFPRYESALAIMTEVGNRLGHSHLC
LGVAKCWLLQKDYDKALECLHQAQELADGMGNKLVTLKVHCLSEQIYRNQGKQEEVREQV
VKFLQCVEELELYCGMCGESIGDRDQKLQALPCSHVFHLKCLQTNGTKGCPKCFKSSMKP
GFV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttttatgaggcgccttgtaccagagatgggccaggaccaaaccaagcaccag
atagagaagggcctgaggttgtatcagtcaaatcagacagagaaagccctgcacgtctgg
acaaaagtgctggagaagacctcagaccctggagggaagtttcgggttttaggatgtttg
atcacagctcactcagaaatgggaaaatataaagatatgctcaagtacgccctcaatcaa
atcgacacagccagagagatggaggacccagactacctgacagagggctacctgaatttg
gcgcgcagcaacgagaagctgtgcgacttccagaaaaccgtctcgtactgtaagacctgc
ttaaacatgcagggtaccactgtcagcctgcagctcaatggccaggtatgtcttagcatg
ggcaacgcctttctgggcctaagtgtcttccagaaagctttggagagctacgagaaggcc
ctgcgctacgcacacaacaacgatgacaagatgctggagtgcagagtctgctgcagtctg
gggaacatctatgttcagcttaaggactatgagaaagccctgtttttcccctgcaaagca
gctgagctcgtcaatgactacggcaagggttggagcctcaagtatcgcgccatgagccag
taccacatgtctgtagcctacaggaaactggagcgcctggcagacgccatggaatgctgt
gaggaatctatgaagattgctctgcagcatggtgaccgtcccctgcaggccctgtgctta
caaaactttgcagacatacaccgctgcaggcatgacgtagataaagcattccctcgctat
gagtctgcactggctatcatgactgaggttggaaatcgtcttggacattcacacttgtgc
ctgggagttgcaaagtgttggcttctgcagaaagattatgacaaggctctggagtgtttg
caccaagcacaagaactggcagatggaatgggaaacaagctggtgacattgaaggtgcat
tgtctgagtgagcagatataccgaaaccaggggaagcaggaggaggtcagagagcaggtg
gtgaaattcctgcagtgtgtcgaggagctggagctctactgcggcatgtgcggcgagtcc
atcggggacagggaccaaaagctgcaggccttaccctgttcccacgttttccatctcaaa
tgtctgcagacaaatgggacaaagggttgtcctaaatgtttcaagtcctccatgaagcct
ggatttgtgtga
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