Scomber scombrus (Atlantic mackerel): 133982412
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Entry
133982412 CDS
T10651
Symbol
pparab
Name
(RefSeq) LOW QUALITY PROTEIN: peroxisome proliferator-activated receptor alpha b
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03320
PPAR signaling pathway
ssco04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
133982412 (pparab)
03320 PPAR signaling pathway
133982412 (pparab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133982412 (pparab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ssco03310
]
133982412 (pparab)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
133982412 (pparab)
Nuclear receptors [BR:
ssco03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
133982412 (pparab)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
133982412
NCBI-ProteinID:
XP_062277443
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Position
6:20187495..20211972
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AA seq
469 aa
AA seq
DB search
MVDMESHYHPPSPLEDSVLGSPLCADDDFIGSMEELQDISESMSNSALGTLDVPEYQYSS
NGSEGSAVLDALTPASSPSSVVYGVAACQEDLTSSTSSLNLECRVCADRASGYHYGVHAC
EGCKGFFRRTIRLKLEYDKCERRCKIQKKNRNKCQYCRFQKCLSVGMSHNAIRFGRMPQS
EKLKLKAEMVTGDREVEDPQIADQKTLAKQIYEAYLKNFNMNKAKARTILTGKTSNPPFV
IHDMDTLQLAEQTLVAKMVGSAGMLKDREAEVRIFHCCQCTSVETVTELTEFAKSVPGFS
SLDLNDQVTLLKYGVYEALFALLASCMNKDGLLVAYGSGFITREFLKSLRRPFSDMMEPK
FQFAMKFNALELDDSDLALFVAAIICCGDRPGLVNVGHIERMQESIVQVLQLHLLANHPD
DTFLFPKLLQKLADLRQLVTEHAQLVQEIKKTEDTSLHPLLQEIYRDMY
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacatggagagccactaccaccccccttcacccctggaggactctgtgctgggc
agccccctgtgtgccgatgatgacttcattggcagcatggaggagctgcaggacatctcc
gagtccatgagcaacagcgccctcggcacccttgatgtcccagaataccagtactccagc
aatggttccgaaggctccgctgtcttagatgccctgaccccagcatccagcccgtcttca
gttgtttacggggtggcagcatgccaggaggacctaacatcttccacctcatcgctaaat
ctggagtgtcgagtgtgtgctgaccgtgcctcgggctaccactatggagtccacgcctgc
gagggctgtaaggggttttttcggaggaccatacgtctgaagctggagtatgacaagtgt
gagcgccgctgcaagatccaaaagaagaaccgaaacaagtgccaatattgccgcttccag
aagtgcctgtcagtgggcatgtcccacaacgccatccgttttggtcggatgccacagtca
gagaagctgaagctgaaggcagagatggtgacgggggacagggaggtggaagacccccag
atagctgaccagaagacgctggccaagcagatttatgaggcctatctcaagaacttcaac
atgaacaaggcaaaagctcgaaccattcttaccgggaagaccagcaatcctcctttcgtc
atccatgacatggacactctccagctggcagagcagacactggtggcaaagatggtcggc
tcggcgggaatgctaaaggacagggaggcagaagtacgaattttccactgctgccaatgc
acctcggtggaaacggtcaccgagctcacagaatttgcaaagtccgtccccgggttctca
agcctggacctcaatgatcaggtgactcttttgaaatatggcgtgtatgaggccctcttt
gccctgctggcctcctgtatgaacaaggatgggcttcttgtagcgtatggctcagggttc
atcacccgggagtttctcaagagcctacggcggcctttcagcgacatgatggagccaaag
ttccagtttgccatgaagtttaatgcactggagctggatgacagtgacctggctctgttt
gtggctgctatcatctgctgtggagaccgaccaggcctggtaaatgtggggcacattgaa
cgaatgcaagagagcattgtgcaggtgctacagctccatcttctggccaatcaccccgac
gacactttcctcttccccaagctgctgcagaaactggctgacctccggcagttagtcacc
gagcacgcgcagctggtgcaggagatcaaaaagacagaagacacctcactgcaccctctc
ctgcaggagatttacagagacatgtactga
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