Scomber scombrus (Atlantic mackerel): 133982420
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Entry
133982420 CDS
T10651
Name
(RefSeq) endoplasmin-like isoform X1
KO
K09487
heat shock protein 90kDa beta
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04141
Protein processing in endoplasmic reticulum
ssco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133982420
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133982420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ssco03110
]
133982420
04131 Membrane trafficking [BR:
ssco04131
]
133982420
Chaperones and folding catalysts [BR:
ssco03110
]
Heat shock proteins
HSP90
133982420
Membrane trafficking [BR:
ssco04131
]
Autophagy
ER-phagy
ER stress-related proteins
133982420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP90
cNMP_binding
RIIa
HATPase_c_3
HATPase_c
SACS
DUF627
PAS_12
DUF4518
Motif
Other DBs
NCBI-GeneID:
133982420
NCBI-ProteinID:
XP_062277452
LinkDB
All DBs
Position
6:22517456..22535556
Genome browser
AA seq
1165 aa
AA seq
DB search
MKRVWVIGLLFALVAFASVKAEDELDVDGTVEEDLGKSRDGSKTDDEVIQREEEAIQLDG
LNAAQIKEIRDKSEKHVFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLMSL
THEDAMAANEELTIKIKSDKEKNMLHITDTGIGMTKEDLVKNLGTIAKSGTSEFLNKMTD
MQTEDQSTSELIGQFGVGFYSAFLVADKVIVTTKHNNGTQHIWESDSNQFSVIEDPRGDT
LGRGTTITLVMKEEASDYLELETIKNLVKKYSQFINFPIYVWASKTETVEEPIEEDAEAA
EEPEKEAAEEEAEVEEEEEDKDKPKTKKVEKTVWDWELMNDIKPIWQRPAKEVEEDEYTA
FYKTFSKDSDDPLAHIHFTAEGEVTFKSILFVPKAAPRGLFDEYGSKKNDFIKLFVRRVF
ITDDFNDMMPKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIAE
EQYNEKFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQTSNSDKDVASLEQYVERMKEKQDK
IYFMAGTSRKEAEVSPFVETLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVK
FDESEKAKEKREAMEKDYEPLTTWLKDKALKDKIEKAVLSQRLTNSPCALVASQYGWSGN
MERIMKAQAYQTGKDISTNYYASQKKTLEINPKHPLIKQMLKKINDDAENQYASDMAVIL
FETATLRSGYQLADTKEYGDRIERMLRLSMDVPLDEQASPAEEDSEDKEEIVDEEDEEDD
EESQTGFVHIHRLIIGMSIEIPEGLTELLQSFTVEVLRNQPRDLLEFALQYFTQLKDSET
KEASFGNDQNSAPRPGKAVNFIDEAMQIDSENGEEEDDDDEEFVVCAEAFNPDEDDEDKE
PWVTHPKTDEQRQRLQEACRDILLFKNLDAEEMSQVLDAMFEKFCTEGEHIIDQDDDGDN
FYVIESGTYNIFVMVDGAEKLVGSYDNRGSFGELALMYNTPRAATIIATSPGALWCLDRL
TFRRIIVKNNAKKRRLYEAFIETLPLLTSLELSERMKVVDVISTRVYTDSQQIIAQTKKD
QEEEEMEIATCSRGQYFGELALVTNKPRAASAYAVGSVKCLVMDVQAFERLLGPCMDIMK
RNIANYEEQLVALFESSTEIEQQSA
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgtttgggtgataggtctcctcttcgcacttgtagcctttgcttctgtaaag
gcagaggatgaacttgacgtggatgggacggtagaagaagatctgggtaaaagcagggat
ggctccaaaacggatgatgaggtgattcagagagaggaggaggccatccagctggatggg
ttaaatgcagctcagattaaggaaatcagagacaagtcagagaaacatgttttccaggct
gaagtcaatcgtatgatgaagctgattatcaactctctctacaagaacaaggagatcttc
cttagggagctgatttccaatgcctcagatgccctggacaagatccgcttgatgtcactc
acccatgaagatgcaatggccgccaacgaagagttgaccatcaaaatcaaatctgataag
gagaagaacatgctccacatcactgacactggtattggaatgaccaaagaggacctggtg
aagaacttgggcaccattgccaagtctggcaccagtgagttcctcaacaagatgacagat
atgcagactgaggatcagtctacctcagagttgatcggccagttcggtgtgggtttctac
tctgctttcctcgtcgccgacaaggtcattgtgacaaccaagcacaacaacggcacccag
cacatctgggagtctgactctaaccagttctctgtcattgaggaccctcgtggcgacaca
ctgggcagaggaaccaccatcacactggtcatgaaggaggaggcctcagactatctggag
ctggagaccatcaagaacctcgtcaagaagtactctcaattcatcaacttccccatttac
gtttgggccagcaagactgagaccgttgaggagcccatcgaggaagatgctgaggcagca
gaagaaccagagaaagaggctgccgaggaagaggctgaggtggaggaagaggaggaggac
aaagacaagcccaagacaaagaaggttgagaagactgtgtgggactgggaactgatgaat
gatatcaagcccatctggcagagaccagcaaaggaagttgaggaggatgaatatacggct
ttctacaagaccttctctaaggacagcgacgaccctctggctcacatccacttcacagct
gagggtgaggttaccttcaagtcaatcctgtttgtgcccaaagcagctccccgtggcctg
tttgacgagtatggctccaagaagaatgacttcatcaagctgtttgtcaggagagttttc
atcacagatgacttcaacgatatgatgcccaagtacctgaacttcgtcaaaggagtggtt
gactctgatgaccttcccctcaatgtgtccagagagactctgcagcaacacaaactgctc
aaggttatccgtaagaagctggtgcgtaagactttggacatgatcaaaaagattgcagag
gaacagtacaacgagaagttctggaaggagtttggaaccaacatcaagctgggcgtcatt
gaggaccactctaacaggacccgcctggctaagctgctccgcttccagacctccaacagc
gacaaagatgttgccagcctggagcagtatgtggagcgcatgaaggagaagcaggacaag
atctacttcatggctggtaccagcaggaaggaggccgaagtttctccctttgttgaaacg
ctgctgaagaagggttatgaggtgatctacctgacagagcctgtggatgagtactgcatc
caggcactacccgagtttgatggaaagcgcttccagaacgtggcaaaggagggtgtcaaa
tttgacgagagtgagaaggccaaggagaagagggaggcaatggagaaggactacgaacca
ctcaccacgtggctgaaggacaaggccctgaaggacaagattgagaaggccgtcctctct
cagaggctaaccaactcaccctgtgctttggttgccagtcagtacggttggtcaggaaac
atggagaggatcatgaaggcacaagcttaccagacaggaaaagacatttccacaaattat
tatgccagccagaagaaaacattagaaatcaaccccaaacatcctctcattaagcaaatg
cttaagaaaatcaatgatgacgctgagaaccagtacgcgtcagatatggctgtgattctg
tttgagacggccacgctgcgctcaggctaccagctggccgacacaaaggagtatggagac
aggatagagcgcatgctccgactcagcatggacgtacctctggacgaacaggcaagtcct
gctgaggaagactctgaagataaagaggaaattgtagatgaggaagatgaggaagatgat
gaagaatcgcaaaccggttttgtccacatccatagactgataataggaatgagtatagaa
attcctgaaggactgacggagctgttacagagctttaccgtggaagtgttgaggaatcag
cccagggatctgctcgagtttgcattacagtacttcacccagctgaaggacagtgagacc
aaagaggcctcatttggcaatgaccaaaattcggccccaagacctggaaaagcggtcaat
ttcattgacgaagccatgcagatcgattctgaaaacggagaggaggaggatgacgatgac
gaggaattcgtagtgtgtgctgaagcgttcaatcctgatgaagatgatgaggataaagag
ccatgggtcacccacccaaaaacagatgaacagagacagagactacaggaagcatgtagg
gacattcttctcttcaagaatttggatgcggaggagatgtctcaggtgctggatgccatg
tttgagaagttctgcacagaaggggagcacatcattgatcaagatgatgatggggacaac
ttctatgttattgaaagtgggacgtataacatttttgtaatggttgatggtgcggagaag
ctggtaggcagctatgacaaccgaggcagcttcggagaattggcgttgatgtacaacacc
cccagagcagccacaataatcgccacctcacctggagccctttggtgcctggatcgtcta
acgttcaggaggatcatagtgaaaaacaatgccaagaagagaaggctgtatgaggcattc
attgaaacgctaccgctgcttacgtcattagagctctcagagaggatgaaagtagtagat
gtgatatccaccagggtgtacactgattcacagcagattattgctcagacgaaaaaagac
caggaggaagaggagatggaaatcgcaacatgctccaggggccagtattttggagaattg
gcacttgtcacaaacaagcctagagctgcatcagcctatgctgtgggaagcgtcaaatgc
ttggtcatggatgttcaagcctttgagagattgctgggcccatgcatggacatcatgaag
agaaacattgctaactatgaggagcaactagtcgccctgtttgaaagtagcactgagatt
gagcaacaaagtgcatga
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integrated database retrieval system
