Scomber scombrus (Atlantic mackerel): 133982431
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Entry
133982431 CDS
T10651
Symbol
fbxl13
Name
(RefSeq) F-box and leucine-rich repeat protein 13
KO
K10279
dynein regulatory complex subunit 6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133982431 (fbxl13)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133982431 (fbxl13)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133982431 (fbxl13)
Cilium and associated proteins [BR:
ssco03037
]
Motile cilia and associated proteins
Nexin-dynein regulatory complex
133982431 (fbxl13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_EndoS
F-box-like
LRR_Zer-1
LRR_At5g56370
F-box
LRR_RPS2
MMS21_N
Motif
Other DBs
NCBI-GeneID:
133982431
NCBI-ProteinID:
XP_062277468
LinkDB
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Position
6:14852832..14873475
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AA seq
773 aa
AA seq
DB search
MALSQTALKDYELPHLYKALLTASCLSCADDPIQFLKNTLMALQGHDNLQDVDWHKFVED
AEQHTATTSQTTAAVDTTYMDPDDTMLSFCLFEKAYSCYRTHLTSSCFRRWKSYATQSKR
DTKELALKMDMTKKHFERKCKQAALTKWSSWVKLYKKIQAAAIEKLEQVVNTARLKRIVA
AWQHVAKDSKRTKEYFKIFQYLELRDWINCAEVCCTWKAIIQSGTLWSQINFSVEKDWIT
DGTMKQILLNYRPFVIHLNLRGCTSLKWQSLKCISQCRNLQELNVSECFNITDTMIQRII
EGCPCLLYLNLSCTLVTNKTLRELSRNCLNLQYLSLAYCYRFTDKGFLYLNTGKGCHNLI
HLNLSGCTQMTVNGFRYISDGCPSLKEIVINDMPTLSDSCVLALIDRCRCLSSISLLDAP
HLSDIAFKAIAEGAKLKTFSTEGNNQLTDLSLKALCSSSHNLSRLHATECPRITDASLKS
VAILKNLQQLDISGCNKVTDKGIYYLIEGFSATTLRELNVSYCNHISDISVMRIARRLCK
LHHLNLSYCERLTDAALEWLSGSSVCSIDISGCNIQDQGLAALERVRWKKLVLAECVRVT
DIGIEKLCKNARDLEHVDVSHCVALSDPAIRAFSFYCRGLVTLRMSGCPKMTDMAVQYLT
SGARYLRELDVSGCVLLTDRTLRHLERICPPLCSITMACCRGISKLAALKLQPHVQYWEH
SNDDPPYWFGYNRGQIVHPITRPIKTDETWGQEQQNNLWADIHRPSIELHPCS
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggctttatcacagactgctctgaaagattatgaactgccacacctatataaggcctta
ttgacagcttcatgtctgtcatgtgcagatgaccccatacagtttctgaaaaacactctc
atggccctgcagggacatgataatctgcaggatgtagactggcacaagtttgttgaagat
gcagaacaacacactgcaacaacctcacagacaacagcagctgtggacactacctatatg
gacccagatgatactatgttgtccttttgtctgttcgagaaggcctactcctgttacagg
acacatttaacaagctcttgcttcaggaggtggaagagctacgccacacagagtaagaga
gataccaaagagctcgcactgaagatggacatgacaaagaagcattttgagaggaaatgc
aagcaagctgctctcaccaaatggtcgagttgggtaaaattatacaagaagatacaggct
gctgccatcgaaaaacttgagcaagttgttaacactgcccgtcttaagcgcatcgtagct
gcatggcaacatgttgcaaaggactccaagaggacaaaagagtacttcaagatctttcag
tatctagaattacgagactggataaactgtgcagaggtgtgttgcacatggaaagctatc
atccagtcaggaacactgtggagccagatcaacttctctgtggaaaaagactggataaca
gacggcacaatgaagcagattctgctgaactaccgcccatttgtgattcatctcaacctg
cggggctgcacgtccttaaaatggcagagcttgaaatgtatcagtcaatgcagaaatctc
caggagctcaatgtgtcagagtgtttcaacattactgacacgatgattcagagaatcatt
gaaggctgtccctgcctgctttacttgaatctttcttgcacactcgtaacaaacaaaact
ctcagagaattgtccagaaactgtctcaaccttcagtacctcagtctggcctactgctac
agattcacagataaaggctttctgtacctgaacacaggaaagggctgccacaatctcatc
cacctcaacctgtccggctgcactcagatgacggtaaacgggttcagatacatttctgac
ggatgcccttcactcaaagagattgtgatcaatgacatgccgacactttcagatagctgt
gtcttggccctgattgacagatgtcgctgtctgtcttccatttctctgctggatgcacct
catctatccgacatcgctttcaaagccatcgctgaaggagccaaacttaagactttcagc
actgagggtaacaaccaactaacagacctcagcttgaaggccttgtgcagcagctcgcac
aacctcagcagactccacgctacagagtgccccagaataactgatgccagcctcaagtct
gtggctatcctcaaaaacctgcaacagctggacatctcaggttgcaacaaagtgactgat
aaagggatttattacctaatcgaaggtttctcagccaccacattgcgagagctgaatgtt
agttactgcaatcacatcagtgatatctctgtcatgaggattgcaagaaggttgtgtaag
ctgcaccatctcaacttgagttactgtgagagactgaccgatgcagctctagagtggctg
agtggcagctctgtctgctctatagacatcagtggttgcaacattcaggatcagggactg
gccgccctcgagagagttcgatggaagaaattagttcttgctgaatgcgttcgtgtcaca
gatattggcattgagaagctgtgcaagaatgcgagagatctggagcatgttgatgtgtct
cactgtgtagctctgtctgacccagccatcagagccttttctttttactgcagagggcta
gtcacactgcggatgtcaggttgtccgaagatgacagatatggcagtgcaatatctgaca
agtggagctcggtacctgcgagagctcgatgtgagtggctgtgttctcctcacagatcgc
actctgcgacacttagagaggatctgtcctccactctgctccatcacgatggcctgctgc
agaggcatctccaagttggccgctttaaaattgcagccacatgtgcagtactgggagcac
agcaatgacgaccctccctactggtttggatacaacaggggccaaatagtgcatccaatc
actagacccatcaagacggatgagacttggggacaagagcagcaaaacaacctctgggct
gacatccaccgaccttccatagagctccacccctgctcttaa
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