Scomber scombrus (Atlantic mackerel): 133982459
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Entry
133982459 CDS
T10651
Symbol
ctsba
Name
(RefSeq) cathepsin B
KO
K01363
cathepsin B [EC:
3.4.22.1
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04140
Autophagy - animal
ssco04142
Lysosome
ssco04210
Apoptosis
ssco04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
133982459 (ctsba)
04140 Autophagy - animal
133982459 (ctsba)
09143 Cell growth and death
04210 Apoptosis
133982459 (ctsba)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133982459 (ctsba)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssco01002
]
133982459 (ctsba)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ssco03110
]
133982459 (ctsba)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133982459 (ctsba)
00536 Glycosaminoglycan binding proteins [BR:
ssco00536
]
133982459 (ctsba)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.1 cathepsin B
133982459 (ctsba)
Peptidases and inhibitors [BR:
ssco01002
]
Cysteine peptidases
Family C1: papain family
133982459 (ctsba)
Chaperones and folding catalysts [BR:
ssco03110
]
Intramolecular chaperones
Papain family
133982459 (ctsba)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of microglial cells
133982459 (ctsba)
Glycosaminoglycan binding proteins [BR:
ssco00536
]
Heparan sulfate / Heparin
Others
133982459 (ctsba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C1
Propeptide_C1
Motif
Other DBs
NCBI-GeneID:
133982459
NCBI-ProteinID:
XP_062277499
LinkDB
All DBs
Position
1:15499527..15508129
Genome browser
AA seq
330 aa
AA seq
DB search
MWHAAFLLLAASLSVSLARPHLHPLSSEMVNYINKVNTTWKAGHNFHNVDYSYVQKLCGT
MLKGPKLPLMVQYAGDMKLPKEFDSRVQWPNCPTLKEIRDQGSCGSCWAFGAAEAISDRV
CIHSNAKVNVEISSEDLLTCCESCGMGCNGGYPSAAWDFWTKEGLVSGGLYDSHVGCRPY
TIAPCEHHVNGSRPPCTGEEGNTPECVAMCEPGYTPSYKEDKHYGKTSYSVLSDEQQIQS
EIFKNGPVEGAFIVYADFLLYKSGVYQHVTGSEAGGHAIKMLGWGEEDGVPYWLCANSWN
TDWGDNGYFKILRGSNHCGIESEVVAGIPK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtggcatgcagccttcctcttattggctgccagcttgtcggtgagcctggccagaccc
cacctccacccactgtccagtgagatggtcaactacatcaataaggtcaacactacctgg
aaggctggtcacaatttccataatgtggactacagttatgtccagaaactctgcggtacg
atgctgaagggacctaaactgcctctcatggttcagtacgctggagatatgaagctgccg
aaggaatttgactcaagagtgcagtggcccaactgtcccactctgaaggagatcagagac
caggggtcctgtggatcctgttgggcttttggtgctgcagaggccatctccgaccgcgtg
tgtatccacagcaatgccaaggtcaatgtggagatttcctcggaggatctgctgacctgc
tgtgaaagttgcggcatgggatgtaacggtggctacccctcagctgcttgggacttctgg
accaaagagggactggtctctggaggcctctatgactcccatgttggttgccggccttac
accatcgccccctgtgagcaccatgtaaacggtagcagacctccctgcactggagaggaa
ggaaacacacctgagtgcgtcgccatgtgtgaacctggatacacacccagctacaaagag
gacaagcactatggtaaaacgtcctacagcgttctgtcagacgagcagcagattcagtct
gagatattcaagaacggcccagtagagggagccttcatcgtctatgcagactttttgctg
tacaagtctggtgtgtatcagcatgtgactgggtctgaagcgggtggacacgccatcaag
atgcttggctggggggaggaggatggtgttccctactggctctgcgctaactcttggaac
accgactggggggataatggttactttaaaatcctgcgtggatctaatcactgtggtatt
gagtctgaagttgtggctggcattcccaaataa
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integrated database retrieval system
