Scomber scombrus (Atlantic mackerel): 133982481
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Entry
133982481 CDS
T10651
Name
(RefSeq) LHFPL tetraspan subfamily member 3 protein-like
KO
K23893
LHFPL tetraspan subfamily member protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
133982481
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssco02000
]
133982481
03037 Cilium and associated proteins [BR:
ssco03037
]
133982481
Transporters [BR:
ssco02000
]
Other transporters
Pores ion channels [TC:
1
]
133982481
Cilium and associated proteins [BR:
ssco03037
]
Other cilia and associated proteins
Stereociliary proteins
133982481
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
L_HMGIC_fpl
PMP22_Claudin
Claudin_2
Pilin_N
Motif
Other DBs
NCBI-GeneID:
133982481
NCBI-ProteinID:
XP_062277519
LinkDB
All DBs
Position
6:23057826..23086123
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AA seq
236 aa
AA seq
DB search
MLPSAEAAKLYQTNYVRNSRVIGLLWAIFTILFGIVNVTIFSQPYWVGDGVDTPQAGYFG
LFHFCIIDAISRELSCHGTFSEFAAIPSTAFKAASFFIGMSMMLVVTCIGCFSLFFLLST
STVYKICGWMQALSGVCLVLGCMIYPDGWDSDEVRRMCGEKTDKYSLGACSMRWAYILAI
MGILDALILSFLAFVLGNRQDGLMTEELLAESKGESIRKGKGSPEGQSSYFASYDK
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgctaccatctgcagaagctgcgaaattgtaccagaccaattacgtccgcaactcccgt
gttatcggacttttatgggccatcttcactatcctgttcggcattgttaacgtgaccatc
ttctcacagccctattgggttggcgatggcgtggatacgccgcaggccggctacttcggc
cttttccacttttgcatcatagacgcgatctccagagagctgtcctgccacggtaccttc
tccgagttcgcggctatcccctccactgcgttcaaggccgcctccttcttcattgggatg
tccatgatgctggttgtcacctgcatcggctgcttcagtctcttctttctcctcagcacc
tccaccgtgtacaagatctgtggctggatgcaagcgttgtcaggtgtctgtttggtgctg
ggttgtatgatctatcctgatggctgggacagcgatgaggtccggcggatgtgcggcgag
aagacagacaaatacagccttggggcctgctccatgcgctgggcctacatcttggctatt
atgggtatcctggatgcgctcatcctctccttcttggcttttgtcctgggcaaccggcag
gacgggcttatgacagaagagctcctggctgagagcaagggtgagagtatacgaaaaggc
aaaggctcccccgaaggccagtcaagttattttgccagctatgacaaataa
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