Scomber scombrus (Atlantic mackerel): 133982565
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Entry
133982565 CDS
T10651
Symbol
ush1c
Name
(RefSeq) harmonin
KO
K21877
harmonin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133982565 (ush1c)
Cilium and associated proteins [BR:
ssco03037
]
Primary cilia and associated proteins
USH complex and associated proteins
133982565 (ush1c)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
USH1C_N
PDZ_6
PDZ_2
Baculo_LEF5_C
DUF3567
Motif
Other DBs
NCBI-GeneID:
133982565
NCBI-ProteinID:
XP_062277614
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All DBs
Position
6:11475208..11496096
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AA seq
553 aa
AA seq
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MERKVAREFRHKVELLIENEAEKDYLYDVLRMYHQSMDLPVLIGDLKLVINEPKRLPLFD
AIRPLIPLKHQVEYDLKTPKRSRKLKEVRLDRMNRDGLGLSVRGGLEYGCGLYISQIVKD
GQAGNVGLQVGDEIVRINGYSISSCIHEEVISLIKTKKTVSLKVRHVGMIPVKSSSDEPL
KWQFVDQFVSESGEKKSSIAGLTSLGGKEIKEKKVFLSLVGTTGMGISISSGPSQKPGIY
ISNVKSGSLSAEVGLQVGDQIVEVNGVDFTNTDHREAVKVLKSSRSLTITVLTGAGSELF
MTDEERLALEARRELERQELMHQKKVALETNKILKEQQEKERQRKMEISQKAAEEEERYK
KEMEKIDSMEKKHHREWEEDWGTKDRPKSPKSPSPPPEMKSSPTPKTKSSLEEASSFTEE
DEEEEQDGEGFQKYEEDFDPFSMFSSDQIAGRDVRLLRIKKVGQLDLALEGGADSPLGKL
VISSVYEGGAADKHGGVVPGDELMAVNGKILIDATLTEGQNSLARAWSSGGDWIDVVIAV
SPPKEYEDEVTFF
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggagcggaaagttgctcgggaatttcggcataaggtggagttgctgattgagaatgag
gcagagaaggactacctatacgatgtcctccgcatgtatcaccagtcgatggatttgccg
gtgcttattggggacttgaagctggtaatcaatgaaccaaagcgtttgcccctgtttgat
gctatccgacctctgatcccactcaaacaccaggtggagtacgacctgaaaacccctaag
aggtcacggaagctcaaagaggtgcgtttggatcggatgaatcgtgatggactgggactg
agtgtccgcggagggctggagtatggctgtggtctctacatctcacagattgttaaagac
ggtcaggctgggaatgtcggccttcaggttggcgatgagattgttcgcatcaacggatac
tccatctcctcctgtatccacgaggaggtcatcagtctcatcaagacgaagaagactgtg
tcactcaaagtcagacatgttgggatgattccagtaaaaagctcttcagatgaacccctc
aagtggcaatttgttgaccagtttgtgtctgagtctggggagaaaaaaagcagcattgca
ggcttgacgtcccttggagggaaggagatcaaagagaagaaggttttccttagccttgtg
ggtaccacgggtatgggcattagcatctccagtggaccgtcacagaaacctggcatctac
atcagtaacgtcaagtcaggctccctttctgcagaagttgggcttcaggttggagaccag
atcgtggaagtaaatggagtggatttcaccaatacggaccacagagaggctgtgaaagtc
ctgaagagcagcagaagtctgactattactgtcctgacaggagctggcagtgaattgttt
atgacagatgaggagcgtttggcattggaggcccgcagggagcttgaaagacaggagctg
atgcatcagaagaaggtggcactggagaccaacaaaatccttaaagagcagcaggagaag
gagaggcagagaaagatggagatctctcagaaagctgcagaggaagaagagcgctataag
aaggagatggagaagattgactctatggagaagaaacaccacagagagtgggaggaggac
tggggaaccaaagacaggcctaaaagcccaaagagcccttctcccccacctgagatgaaa
agttcccccactccaaagaccaagagttctcttgaagaagccagctccttcacagaggaa
gatgaagaggaagagcaggacggagaaggctttcagaaatatgaggaagactttgatccc
ttctcaatgttctcctcggaccagatagccgggcgagatgtgagactgctgagaatcaaa
aaggtgggacagcttgacctggctctggaggggggtgcagactctcccttggggaagtta
gtgatatcgtctgtgtatgaagggggagctgcagataagcacggtggcgttgtacccggg
gatgagcttatggctgtgaatgggaagatcctgattgatgccacattgactgaaggacaa
aactctctggctcgagcttggagtagtggaggggactggattgatgttgtgattgcagtg
tcccctccaaaagagtatgaagatgaagtaacgttcttctag
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