Scomber scombrus (Atlantic mackerel): 133982580
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Entry
133982580 CDS
T10651
Symbol
tbp
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133982580 (tbp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133982580 (tbp)
03021 Transcription machinery [BR:
ssco03021
]
133982580 (tbp)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
133982580 (tbp)
Transcription machinery [BR:
ssco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133982580 (tbp)
RNA polymerase III system
TFIIIB
133982580 (tbp)
RNA polymerase I system
SL1/TIF-1B
133982580 (tbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
NUDE_C
Motif
Other DBs
NCBI-GeneID:
133982580
NCBI-ProteinID:
XP_062277646
LinkDB
All DBs
Position
1:15744483..15750925
Genome browser
AA seq
303 aa
AA seq
DB search
MDQNNSIPGFQGLASPQGAMTPGMPIFSPMMPYGSGLTPQPVQNTNSLSILEEQQRQQQQ
QQAQQANAGLPSTSGQTPQLFHSQTVAGSTTTALPGNTPLHPYNTPLTPMTPITPATPAS
ESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSS
GKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLT
HQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFR
KTT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggaccagaacaacagcataccaggctttcaggggctggcctccccgcagggtgccatg
acaccaggaatgcctattttcagtcccatgatgccatatgggtcaggcctgacaccccag
cctgtccagaacaccaacagtctgtcgatactggaggaacagcagagacaacaacagcag
caacaggcacagcaggctaacgcaggccttccaagtacatcagggcagacccctcaactt
tttcattcccagacagtagcaggctcaaccaccacagcactgccggggaacacaccacta
cacccctacaacactccactgacccccatgaccccgatcacaccggccacgccagcctca
gagagctctggaatagtaccacagctacaaaacatagtatctactgtaaatctgggctgt
aaactagacttgaagaccattgccttgagagccaggaatgccgagtataacccaaagcgt
tttgctgctgtcatcatgagaatacgagaacccaggaccactgctctcatcttcagctcc
ggcaagatggtctgcactggagcaaagagtgaggagcagtcgaggttagccgccagaaaa
tacgctcgtgtggtgcagaaactcggctttcctgccaagttcctggactttaagatacag
aacatggtgggcagctgcgatgtgaagttccccattcgactggagggattagtcctcaca
catcaacagttcagcagctatgaaccagagctgtttccaggactgatttacagaatgatc
aaacccagaatcgtcctgcttatctttgtttctgggaaagtcgtactaacaggtgcaaag
gtgagagcagagatctatgaagcgtttgaaaacatctaccccatcttgaaaggcttccgc
aagacaacgtag
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integrated database retrieval system
