Scomber scombrus (Atlantic mackerel): 133982858
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Entry
133982858 CDS
T10651
Symbol
ago3a
Name
(RefSeq) protein argonaute-3 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133982858 (ago3a)
03036 Chromosome and associated proteins [BR:
ssco03036
]
133982858 (ago3a)
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133982858 (ago3a)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133982858 (ago3a)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133982858 (ago3a)
microRNA pathway
RISC loading complex
133982858 (ago3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoMid
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
133982858
NCBI-ProteinID:
XP_062277689
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All DBs
Position
7:complement(25959572..25997005)
Genome browser
AA seq
868 aa
AA seq
DB search
MEIGTTGAVGAQSLFSMPRRPGYGTMGKPIKLLANCFQVDIPKMDVYLYEVDIKPDKCPR
RVNREVVDSMVQHFKVTIFGDRRPVYDGKRSLYTANPLPVAPAGVDLDVTLPGEGGKDRP
FKVSIKFVSLVSWHMLHEVLTGRSMPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGR
SFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLD
IHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPASHQTFPLQLE
NGQTVERTVAQYFREKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDN
QTSTMIKATARSAPDRQEEISRLVRSANYEADPFVQEFQFKVRDEMAHVTGRVLPAPMLQ
YGGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREEILKGFTDQLRKISK
DAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYAGLQLIIVILPGKTPVYAEVKRVGDTL
LGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRPSVFQQPVIFLGADVT
HPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEVIQDLASMVRELLIQFYKSTRY
KPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKEYQPGITYIVVQKRHHTRLFCAD
RNERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRPSHYHVLWDDNCFTADEF
QLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDRSSPLSPCSAEGSHVS
GQSNGRDPQALAKAVQIHHDTLRTMYFA
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcggaactacaggagccgttggggcccagtccctgttctccatgccccggcgg
cctggctatggcaccatggggaagcccatcaagctgttggccaactgcttccaggtggac
atccccaagatggatgtctacctgtacgaggtggacatcaagcctgacaagtgcccacgg
cgagtcaacagggaggtggtggactccatggtgcagcacttcaaggtgacaatctttggg
gatcggaggccagtctacgatggaaagaggagcttgtacacagccaacccgctgcctgtg
gcacccgcaggggtggacctggatgtcactctgccaggtgagggagggaaagatcgcccc
ttcaaagtttccatcaagtttgtgtctctagtcagctggcacatgctccacgaagtgctg
accggccgcagcatgcctgagcccctagagctggacaaacccatcagtaccaaccctgtg
catgcagtggacgtggtgctgcgacacctgccatccatgaagtacactccggtgggccgc
tccttcttttctgctccagagggctatgaccatcccctgggaggtggaagggaggtgtgg
tttggcttccaccaatctgtacgccccgccatgtggaagatgatgcttaatattgatgtg
tctgccactgccttctacaaggcccaacctgtcatccagttcatgtgtgaagtgctggac
atccacaacatagacgagcagcctcgccccctcacagactcgcaccgggtcaaattcacc
aaagaaatcaaaggtttgaaggttgaggtgacgcactgtggaacaatgcggaggaagtac
cgcgtctgcaacgtgacccgccggcctgccagccatcaaacgttccctctacagttggag
aacggtcagactgtagagcgtactgtagcccagtacttcagggagaagtacaaccttcag
cttaagtatccacatttgccctgtctacaggtgggccaggagcaaaagcacacctacttg
cccctggaggtgtgtaacattgtagctggtcaacggtgcatcaagaaactgacagataat
cagacctccactatgatcaaagccacagctcgctctgcacctgacaggcaggaggagatc
agcagactggtgcgcagtgccaactacgaggccgacccctttgtgcaggaattccagttc
aaggttcgcgacgagatggcccacgtgacggggcgagtgctacccgcccccatgctgcag
tacggcggcaggaaccgcactgtagccacgcccagccacggggtgtgggacatgaggggg
aaacagttccacacaggggtggagatcaagatgtgggccatcgcctgctttgccacacag
agacagtgtcgagaagaaatcctcaagggtttcacggatcagctgcgtaagatctctaag
gatgccgggatgcccatccagggccagccatgtttctgtaaatacgcccagggagcggac
agcgtagagcccatgttcagacacctgaagaacacctacgctgggctgcagctcatcatc
gtcattctgccgggaaagactcctgtctatgcggaggtaaagcgtgtgggagacacactc
ttgggcatggccacgcagtgcgttcaagttaagaacgtagtgaagacatcgcctcagacg
ctctccaacctctgcctcaagatcaatgtgaagctgggaggcatcaacaacatcctggtg
ccacaccaacgaccatcagtgtttcagcagccagttatcttcttgggagcagatgttaca
catccacctgctggagatgggaagaagccctcaattgcagctgtggtaggcagtatggat
gcccaccccagcaggtactgtgccaccgtgcgggtccagaggcccaggcaggaggttatc
caggacctggcctccatggtgcgggagctgcttatccagttctacaagtcgactcgctac
aagcccaccaggatcatcttctacagggatggagtttcagaaggccagttcagacaggtg
ctgtattatgagctgctggccatccgtgaggcctgtatcagcctggagaaggagtaccag
ccaggcatcacctacattgttgtgcaaaaacgccaccatacacgcctcttctgtgccgac
cgcaacgagagagttggacgtagtggaaacattcctgctggtactaccgtggatacggac
atcacacatccctacgagtttgacttttacctctgcagtcacgctggaatacagggcacc
agtcggccttcccactaccatgtactgtgggacgacaattgttttacggctgacgagttc
cagctgctcacctaccagttgtgccacacctacgtacgctgcacccgctcagtctccatc
cctgcgccagcctactacgcccacctggtggccttccgtgcccgctaccatctggtggac
aaagaacatgacagatcctctcctctctcaccttgcagcgctgagggcagccacgtgtct
ggtcagagtaatggtcgggacccccaggcgctggccaaagctgttcagattcaccacgac
accctgaggaccatgtacttcgcctga
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