Entry
Symbol
mdc1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1
KO
K20780 mediator of DNA damage checkpoint protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:ssco00001 ]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:ssco03400 ]
133982883 (mdc1)
DNA repair and recombination proteins [BR:ssco03400 ]
Eukaryotic type
Check point factors
Other check point factors
133982883 (mdc1)
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
7:20238520..20248762
Genome browser
AA seq
2203 aa AA seq DB search
MDATQMISDSILESDEEENEEENKDKRGQPLAKLRILKNEHIPAAELPLFSGENVLGRDP
NTCTLPLPASSVSKQHAIICISVHRRRGCHSEVDMEALVWDLGSMNGTRKGRLKLTPNVR
YALSEGDRVVVADIPCQYVSCAVDTVSSQGDMRTPVSRDSGVKAMLPDASREKGGDTSTG
SKKYVNEGTNPSAMVSLRDPEETTKTPARTTCLSFEQTPTQPQGSLVPESDSDSDGERGG
RKDGRRKPQVSDSDSHKSNPTCSTFLSPTNKIVPESEDESPITPSSSTKNRPYTHVSFCK
ELPDIDVGRQQLKKKETFAIVDDSEEEREREEERATPGGRLLEESGQDVLVKQENTVSVT
REEEMPLSTRAVATDVIPAFNMDSDTDVEGEEENEASVAPVTLNANQQADQPPNTAQFHM
DSDTDVDEDEDTFDKGPKSVLFSGDNTKPPHAVPVTQPEGITMDSDTDVDDDADMSDTAA
KAKPTSLLSAHTADSAPLTQPKDFHLDSDTDVDEEEENECGTNNTCSEVDEAPIRTGLKP
TGSESAPAAPHSLNIDSDTDDEVISAPAINEPLVVPAVTDSCTIAAAGTSDSDTDAEEDS
PLVIPINITALSGTPDTTLADTQSDSDAETDVDEPSVPPAGDGHNPADLKLDSDTDVEDK
EADLGEAGEDQIPSLHRQNTSGLPGSLWQNCSTPVQISAGEVEEMETQAFLSPSSGPFRR
AVGPAVRPVVSSCSDSQDEDFVVAETQSFILQTRNDHAMDPTQAFCLESSGDERDGQPSR
GGSFQLGLSDSSHLQCQAAALAMESTQEFVSVGGGVNMEDTQAYAATSTSDRTSLENDPN
LEATQAYGGDEEPARSPVTFEKEGQLDLALQPTQAYICGPCHDSEDETEEDDRKNLTTAE
TLPLDFPTSSTLAMAETQPVCAYREEESLATVSHISSKTEVMVVHRMAAQPEEMPVSGAL
SIAETQPICTSEDEDSIPGPRKRKAKQLEEETQPITSLDYSAVETQPMHVGADETHSVAT
SGNEESDDEDSIPGPQKRKAKQLRLEEEETQMLVNSERSAAETQPIDTCDDKESDDVDSI
PGPRKKRKPKQLEEETQPITSSDYSAVETQPMHVGADETHSVATSGNEESDDEDSIPGPR
KKRKAQQLEDETQPLTSPDYSAVETQPIDTCEDKESDDEDLIQSSRKRNAKQLNLEEEAT
QALLNSELSAAETQPMDTCEDEESDDEDSIPGPRKKRKAKPLQLEDEQTQSLTGSVVPAD
GTEAMLTGEDVESEESIVGQRKRKAKPLQLEEEETQSLTISEASTVESKPVRTNTDTQTQ
RGKGGPSEAGTSCISVTSRRGTRARLREEEKQAESSEPPRRQTRGNKAFLSTRGRMQKSR
PDESEEKEKVGQPKRTRGKTSLRQQRDDGKEEEKLDIERNEQQQQQEGMLGEEKDVAEPR
QQVREQTEEERRKINEETERQQWEEQQRTERTRQEKEEQERLQAEKAERLRLEQERAENE
RIDRERLEEEERERAARIQREKEQLERKEKSEKERLEREKAEREEKDRLEKEENERIQSE
RKEQEENERLETAKRAAEEQERLERERKEREHQARLETEEKEREEREKLEKEKQEKEAEE
KQRKELQEIKEEVKTPSDDAPARRTRSRSNSSNSVSSERSALSVNTQGSTGRGRGRGRGA
KRTSEPVQAPLPRGNNRRRTVAAEPSGQGQTEQDSNDVSPQGILSRSNSSNSLNSEISIS
TPSSQNRGRRSRQRGRGRKTETEPTPLVSCQSDQSSAPKPTARGRKSRKAEVTSNEVSHD
GDKEKAESQQPSTTRGQRRANVNEPEPTAADKEGQTSHEEGCANEHSLLAKRTVTGRSQK
AVKGESVEIPAEAAGGDAKEATTQATRRGRASSVRGSKNAPPEAKVKDESEKMEEEMVER
RGRGRTSVVQKKKKEVQEKSVNSTNQDANMTSEPQTPTSRKRQAPVDSSPMAKTPRSSSS
SPAAGGRLRAASQTYKVLFTGVVDEAGERVLARLGGCMAKGVADMNCLVTDKVRRTVKFL
CAVAKGVPIVTTHWLEKSGKAGSFLSPSAFVVNDPEQEKKFNFCLQESLRVASSQPLLQG
YEIHVTKSVKPEPVHMKDIISCSGATFLPKMPSTHKPQTVVISCEDDWLLCGPAVLASLP
VVTVEFILTGILQQILDFQTHKLSGPIANLQPARGRGRGRKKT
NT seq
6612 nt NT seq +upstream nt +downstream nt
atggatgctactcagatgatcagtgactcaatcttggagtcagatgaagaagaaaatgaa
gaggagaataaagataagagggggcaaccactggctaaactgcgcatcctaaagaatgag
cacatccctgcagcagagttgcccctgttttcgggggaaaatgtgcttggtcgtgacccc
aacacctgcaccctgcctttgccagcatcctccgtatcaaagcagcacgccatcatctgc
atctctgtccacaggagaagaggatgtcacagtgaagtggatatggaggctttggtatgg
gacctagggagcatgaatgggacccgcaagggccgcttaaagctgaccccaaatgtacgc
tacgcccttagtgaaggtgaccgtgtggtggtggcagacatcccatgtcagtatgtgagt
tgtgctgtagacacagtatcctctcaaggggacatgaggactcctgtgagcagagattca
ggggtaaaagccatgctgccagatgcctcgagagaaaagggaggtgacacaagtacaggc
agtaagaaatatgtcaatgaaggtacaaacccatcagccatggtttcattacgtgatcca
gaggaaacaacgaagactcctgccagaaccacttgcctgtctttcgaacaaactccgacc
cagccccaggggtccctggtcccagaatctgactcagactcagatggagaaagaggggga
cgaaaagatggaaggcgcaagcctcaagtatcagattctgactctcataaatccaatccc
acctgctctacattcttgagtcccacaaacaaaattgttcctgaaagcgaggatgaaagt
cccatcacaccgtcctcttccactaaaaataggccgtacacacacgtcagcttctgcaag
gagctgccagacatagatgtcgggcgacagcagctgaagaaaaaagagacatttgcgatt
gtggacgacagtgaagaggagcgagagagggaggaggaaagagcaacaccaggagggaga
ttgcttgaggagagtggacaagatgtgctagtgaagcaggaaaacactgtcagtgttaca
agagaagaggaaatgcctctgtccacaagagcagtcgccacagatgtgatccctgcattt
aacatggacagtgacactgatgtggagggagaggaggaaaatgaggcttctgtggctcct
gtgaccttgaatgcaaatcaacaagctgatcaaccaccaaacacggcccagtttcacatg
gacagcgacacagatgttgatgaggatgaagatacctttgacaaaggtcccaaatctgtg
cttttctctggtgacaataccaaacctcctcatgctgtcccagttactcagcctgagggc
atcacaatggacagtgacactgatgtggatgatgatgctgatatgtcagacactgctgca
aaagcaaaacccacatccttactgagtgcacacacagctgattctgctcctctaacgcag
ccaaaagatttccacctagacagtgacacagatgttgatgaggaagaggaaaatgaatgt
ggaactaataacacatgctctgaagtcgatgaagcacccattaggacaggtttaaagccc
actgggtctgaatctgcccctgctgctcctcacagcctgaacatagacagtgacacagac
gatgaggtgatctctgcccctgctattaatgaaccattggttgtgcctgctgttacagat
tcatgcaccattgcagctgcaggaacaagtgacagtgacacagatgcagaagaggattct
cctctggttatacccattaatatcacagctttgtcaggcactcccgataccacgttagca
gacactcagtcagattctgatgcagaaacagatgtggatgagcccagcgtgccccctgct
ggagatgggcacaatccagctgacctcaaactggacagtgatacagatgtggaggataag
gaggcggacctgggagaggcaggagaggaccagatccctagcctacacagacaaaacaca
tctggattgccgggttctctatggcaaaattgctctactcctgtgcaaatttcagcagga
gaagtggaagagatggaaactcaggccttccttagcccctcttcaggtccatttagacgt
gcagtgggccctgctgtaagacctgtagtgtcttcctgctcagacagccaagatgaggac
tttgttgtggctgagacacagtcctttattcttcagacccgtaatgaccatgccatggac
ccaacccaagcgttttgtcttgagtcttctggcgatgaaagagatggacaacctagtaga
ggagggtctttccagctcggattgtctgacagcagccacctgcagtgtcaggctgcagct
ctggccatggagagcacccaagagtttgtctctgtgggtggaggtgtgaatatggaagat
acccaagcttatgcagccacctcaacttcagacagaacatcattggagaatgatccaaac
ctggaggccacccaggcctacggaggggatgaggagcctgccagaagtccagtgacattt
gagaaggaaggtcagctagatttggctctacaaccaacacaggcatacatttgtgggccc
tgccatgattcagaggacgaaacggaggaagatgatagaaaaaaccttactactgctgag
actctacctttagactttcccacctcatctactcttgccatggctgaaacccaaccagtg
tgtgcctatagggaagaggagagtttggcaacagtgagtcacatttcctctaaaacagaa
gttatggtggtacaccggatggcagctcaacctgaggagatgcctgtgagtggagctttg
tctatagctgaaactcagcccatatgtacaagtgaagatgaggactcgattccaggtcca
cgaaaaagaaaagcaaagcagcttgaagaagaaacgcagcccatcactagtttggactat
tctgctgttgaaacccagccaatgcatgtaggtgcagatgaaactcattccgtagctaca
agtggaaatgaggaaagtgatgatgaggactcgattccaggtccacagaaaagaaaagcg
aaacaactgcgacttgaagaagaagagacgcagatgcttgtaaattctgagcgctctgct
gctgaaactcagcccatagatacatgtgatgataaggaaagtgatgatgtggactcgatt
ccaggtccacgaaaaaaaagaaaaccaaagcagcttgaagaagagacgcagcccatcact
agttctgactattctgctgttgaaacccagccaatgcatgtaggtgcagatgaaactcat
tccgtagctacaagtggaaatgaggaaagtgacgatgaggactcgattccaggtccacga
aaaaaaagaaaagcacagcagcttgaggacgagacgcagcccctcactagccctgactat
tctgctgttgaaactcagcccatagatacatgtgaagataaggaaagtgacgatgaagac
ttgattcaaagttcacggaaaagaaacgcaaagcaactgaaccttgaagaagaagcgacg
caggcactcttaaattctgagctctctgctgctgaaactcagcccatggatacatgtgaa
gatgaggaaagtgatgatgaggactcgattccaggtcctcgaaaaaaaagaaaagcaaag
ccgctgcagctggaagatgagcagacacagtccctcaccgggtctgttgttcctgccgat
ggaaccgaagccatgctcacaggtgaagatgtggaaagtgaagagtctattgtaggtcaa
cgaaaaagaaaggcaaagccactgcagcttgaggaagaagagacccagtcgctcacaatt
tcggaggcatctacagttgaatctaagccagtgagaacaaatactgacacacaaactcag
agaggaaaggggggaccatctgaagctggaaccagttgcatcagcgttacaagtagaaga
ggaacaagggcaagattaagagaagaggagaagcaggcagaaagttctgaacctcccagg
agacagacaagagggaataaagcttttctaagtactagaggaaggatgcaaaaatccagg
cctgatgagagcgaggaaaaggagaaggtagggcagcctaagaggactagagggaaaaca
tcgttgaggcaacagagagatgatgggaaagaagaagaaaagcttgatattgaaagaaat
gagcagcagcaacaacaagaagggatgttgggagaggagaaagatgttgcagagcccaga
caacaagtgagagaacaaacagaggaggaaaggaggaagatcaatgaggaaacagagaga
caacagtgggaagaacagcaaagaacagaaaggacaaggcaagaaaaggaagaacaagaa
cgattacaagctgaaaaagcagagaggttaagacttgaacaggagagagcagaaaatgag
agaatagatcgggaaagactagaagaagaagaaagggaaagagctgctaggatacagagg
gaaaaagaacaattagaaagaaaagagaagagtgaaaaagagagattagagcgggaaaaa
gcagagagagaagaaaaggatcgattagagaaagaagagaatgagagaatacaaagtgaa
agaaaggaacaagaggaaaatgaaagattagaaacagcaaagagggcagcagaagagcaa
gaaagacttgagagggagaggaaagaacgagaacaccaagcaaggctggagacagaagaa
aaggaaagagaagaaagagaaaaactggaaaaagaaaaacaagaaaaggaagcagaagaa
aaacaaagaaaggagctacaagaaatcaaggaagaagtgaaaacacccagcgatgatgct
ccagcaaggaggaccagatctcgctccaactcttccaactctgtcagctctgagaggtcc
gctctaagtgtcaacacccaggggagtacagggagaggccgaggccgaggtagaggagca
aagaggaccagcgagccagtacaggcccccctcccaagaggcaacaacaggaggaggaca
gtggctgcagagccatctggccagggacaaacagaacaggacagcaatgatgtttctcct
caaggaatcctttcaaggtccaactcctccaactccctcaactctgagatttccatcagc
actcccagctctcagaacagaggaagaagaagcaggcagcgaggaagagggaggaaaaca
gagactgagcccactcctcttgtaagttgtcagagtgatcagagttcagctcccaaaccc
acagccagaggcaggaagagcaggaaagcagaggtgacctccaatgaggtttctcatgat
ggtgataaagagaaggcagagtctcagcagcctagtaccactagggggcagagacgagct
aatgtcaatgagcctgaacctacagctgcagataaggaaggccagacaagtcatgaggaa
ggatgtgccaatgaacactcacttctggctaaaaggactgtcacgggaagaagccaaaaa
gcagtaaaaggtgaaagtgtagagataccagccgaggcagcagggggagatgcaaaagag
gctaccacacaagctacaagaagaggcagagcatccagtgttcgggggagtaagaacgcc
ccccctgaagcgaaggtgaaagatgagagtgagaaaatggaggaggagatggttgagagg
agaggcagaggccggacatcagtggtccaaaaaaagaagaaagaggtgcaggaaaaaagt
gtcaattccactaaccaggatgcaaatatgacatcagagcctcagactccaaccagccgg
aaaagacaggcccctgtggactcctctcctatggcaaagacccctcgctcttcctcatct
tccccggcagctggaggtcgactacgagctgccagccagacctacaaggtgctgttcact
ggggtcgtggatgaagcaggggagagagtgctagctcgtttaggaggctgcatggctaaa
ggcgtggcggacatgaactgtctggtcactgataaggtgcgcaggactgtcaagttcctg
tgtgcagtggctaaaggagtccccattgtcaccacacactggctggaaaagagtggtaaa
gctgggagcttcctgtctcccagtgctttcgttgtgaatgatccagagcaggaaaagaag
ttcaatttctgcctgcaggaatctctgagggttgccagcagtcagccactcttacaggga
tatgagatccacgttacaaagtcagtgaagccagagccagttcatatgaaagacatcatt
tcatgcagcggagccacatttcttcccaagatgccttctacacacaagccccagactgta
gtgatttcctgtgaggacgactggttgctgtgcggcccggctgtcttagcgtctctccca
gtcgtcactgtggagttcattctcacagggatcctccagcagatacttgactttcagacc
cataagctctctggccctatagctaacctgcaacctgccagaggcagagggaggggcagg
aagaagacatag