KEGG   Scomber scombrus (Atlantic mackerel): 133982883
Entry
133982883         CDS       T10651                                 
Symbol
mdc1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssco03400]
    133982883 (mdc1)
DNA repair and recombination proteins [BR:ssco03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    133982883 (mdc1)
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 FHA BRCT
Other DBs
NCBI-GeneID: 133982883
NCBI-ProteinID: XP_062277719
LinkDB
Position
7:20238520..20248762
AA seq 2203 aa
MDATQMISDSILESDEEENEEENKDKRGQPLAKLRILKNEHIPAAELPLFSGENVLGRDP
NTCTLPLPASSVSKQHAIICISVHRRRGCHSEVDMEALVWDLGSMNGTRKGRLKLTPNVR
YALSEGDRVVVADIPCQYVSCAVDTVSSQGDMRTPVSRDSGVKAMLPDASREKGGDTSTG
SKKYVNEGTNPSAMVSLRDPEETTKTPARTTCLSFEQTPTQPQGSLVPESDSDSDGERGG
RKDGRRKPQVSDSDSHKSNPTCSTFLSPTNKIVPESEDESPITPSSSTKNRPYTHVSFCK
ELPDIDVGRQQLKKKETFAIVDDSEEEREREEERATPGGRLLEESGQDVLVKQENTVSVT
REEEMPLSTRAVATDVIPAFNMDSDTDVEGEEENEASVAPVTLNANQQADQPPNTAQFHM
DSDTDVDEDEDTFDKGPKSVLFSGDNTKPPHAVPVTQPEGITMDSDTDVDDDADMSDTAA
KAKPTSLLSAHTADSAPLTQPKDFHLDSDTDVDEEEENECGTNNTCSEVDEAPIRTGLKP
TGSESAPAAPHSLNIDSDTDDEVISAPAINEPLVVPAVTDSCTIAAAGTSDSDTDAEEDS
PLVIPINITALSGTPDTTLADTQSDSDAETDVDEPSVPPAGDGHNPADLKLDSDTDVEDK
EADLGEAGEDQIPSLHRQNTSGLPGSLWQNCSTPVQISAGEVEEMETQAFLSPSSGPFRR
AVGPAVRPVVSSCSDSQDEDFVVAETQSFILQTRNDHAMDPTQAFCLESSGDERDGQPSR
GGSFQLGLSDSSHLQCQAAALAMESTQEFVSVGGGVNMEDTQAYAATSTSDRTSLENDPN
LEATQAYGGDEEPARSPVTFEKEGQLDLALQPTQAYICGPCHDSEDETEEDDRKNLTTAE
TLPLDFPTSSTLAMAETQPVCAYREEESLATVSHISSKTEVMVVHRMAAQPEEMPVSGAL
SIAETQPICTSEDEDSIPGPRKRKAKQLEEETQPITSLDYSAVETQPMHVGADETHSVAT
SGNEESDDEDSIPGPQKRKAKQLRLEEEETQMLVNSERSAAETQPIDTCDDKESDDVDSI
PGPRKKRKPKQLEEETQPITSSDYSAVETQPMHVGADETHSVATSGNEESDDEDSIPGPR
KKRKAQQLEDETQPLTSPDYSAVETQPIDTCEDKESDDEDLIQSSRKRNAKQLNLEEEAT
QALLNSELSAAETQPMDTCEDEESDDEDSIPGPRKKRKAKPLQLEDEQTQSLTGSVVPAD
GTEAMLTGEDVESEESIVGQRKRKAKPLQLEEEETQSLTISEASTVESKPVRTNTDTQTQ
RGKGGPSEAGTSCISVTSRRGTRARLREEEKQAESSEPPRRQTRGNKAFLSTRGRMQKSR
PDESEEKEKVGQPKRTRGKTSLRQQRDDGKEEEKLDIERNEQQQQQEGMLGEEKDVAEPR
QQVREQTEEERRKINEETERQQWEEQQRTERTRQEKEEQERLQAEKAERLRLEQERAENE
RIDRERLEEEERERAARIQREKEQLERKEKSEKERLEREKAEREEKDRLEKEENERIQSE
RKEQEENERLETAKRAAEEQERLERERKEREHQARLETEEKEREEREKLEKEKQEKEAEE
KQRKELQEIKEEVKTPSDDAPARRTRSRSNSSNSVSSERSALSVNTQGSTGRGRGRGRGA
KRTSEPVQAPLPRGNNRRRTVAAEPSGQGQTEQDSNDVSPQGILSRSNSSNSLNSEISIS
TPSSQNRGRRSRQRGRGRKTETEPTPLVSCQSDQSSAPKPTARGRKSRKAEVTSNEVSHD
GDKEKAESQQPSTTRGQRRANVNEPEPTAADKEGQTSHEEGCANEHSLLAKRTVTGRSQK
AVKGESVEIPAEAAGGDAKEATTQATRRGRASSVRGSKNAPPEAKVKDESEKMEEEMVER
RGRGRTSVVQKKKKEVQEKSVNSTNQDANMTSEPQTPTSRKRQAPVDSSPMAKTPRSSSS
SPAAGGRLRAASQTYKVLFTGVVDEAGERVLARLGGCMAKGVADMNCLVTDKVRRTVKFL
CAVAKGVPIVTTHWLEKSGKAGSFLSPSAFVVNDPEQEKKFNFCLQESLRVASSQPLLQG
YEIHVTKSVKPEPVHMKDIISCSGATFLPKMPSTHKPQTVVISCEDDWLLCGPAVLASLP
VVTVEFILTGILQQILDFQTHKLSGPIANLQPARGRGRGRKKT
NT seq 6612 nt   +upstreamnt  +downstreamnt
atggatgctactcagatgatcagtgactcaatcttggagtcagatgaagaagaaaatgaa
gaggagaataaagataagagggggcaaccactggctaaactgcgcatcctaaagaatgag
cacatccctgcagcagagttgcccctgttttcgggggaaaatgtgcttggtcgtgacccc
aacacctgcaccctgcctttgccagcatcctccgtatcaaagcagcacgccatcatctgc
atctctgtccacaggagaagaggatgtcacagtgaagtggatatggaggctttggtatgg
gacctagggagcatgaatgggacccgcaagggccgcttaaagctgaccccaaatgtacgc
tacgcccttagtgaaggtgaccgtgtggtggtggcagacatcccatgtcagtatgtgagt
tgtgctgtagacacagtatcctctcaaggggacatgaggactcctgtgagcagagattca
ggggtaaaagccatgctgccagatgcctcgagagaaaagggaggtgacacaagtacaggc
agtaagaaatatgtcaatgaaggtacaaacccatcagccatggtttcattacgtgatcca
gaggaaacaacgaagactcctgccagaaccacttgcctgtctttcgaacaaactccgacc
cagccccaggggtccctggtcccagaatctgactcagactcagatggagaaagaggggga
cgaaaagatggaaggcgcaagcctcaagtatcagattctgactctcataaatccaatccc
acctgctctacattcttgagtcccacaaacaaaattgttcctgaaagcgaggatgaaagt
cccatcacaccgtcctcttccactaaaaataggccgtacacacacgtcagcttctgcaag
gagctgccagacatagatgtcgggcgacagcagctgaagaaaaaagagacatttgcgatt
gtggacgacagtgaagaggagcgagagagggaggaggaaagagcaacaccaggagggaga
ttgcttgaggagagtggacaagatgtgctagtgaagcaggaaaacactgtcagtgttaca
agagaagaggaaatgcctctgtccacaagagcagtcgccacagatgtgatccctgcattt
aacatggacagtgacactgatgtggagggagaggaggaaaatgaggcttctgtggctcct
gtgaccttgaatgcaaatcaacaagctgatcaaccaccaaacacggcccagtttcacatg
gacagcgacacagatgttgatgaggatgaagatacctttgacaaaggtcccaaatctgtg
cttttctctggtgacaataccaaacctcctcatgctgtcccagttactcagcctgagggc
atcacaatggacagtgacactgatgtggatgatgatgctgatatgtcagacactgctgca
aaagcaaaacccacatccttactgagtgcacacacagctgattctgctcctctaacgcag
ccaaaagatttccacctagacagtgacacagatgttgatgaggaagaggaaaatgaatgt
ggaactaataacacatgctctgaagtcgatgaagcacccattaggacaggtttaaagccc
actgggtctgaatctgcccctgctgctcctcacagcctgaacatagacagtgacacagac
gatgaggtgatctctgcccctgctattaatgaaccattggttgtgcctgctgttacagat
tcatgcaccattgcagctgcaggaacaagtgacagtgacacagatgcagaagaggattct
cctctggttatacccattaatatcacagctttgtcaggcactcccgataccacgttagca
gacactcagtcagattctgatgcagaaacagatgtggatgagcccagcgtgccccctgct
ggagatgggcacaatccagctgacctcaaactggacagtgatacagatgtggaggataag
gaggcggacctgggagaggcaggagaggaccagatccctagcctacacagacaaaacaca
tctggattgccgggttctctatggcaaaattgctctactcctgtgcaaatttcagcagga
gaagtggaagagatggaaactcaggccttccttagcccctcttcaggtccatttagacgt
gcagtgggccctgctgtaagacctgtagtgtcttcctgctcagacagccaagatgaggac
tttgttgtggctgagacacagtcctttattcttcagacccgtaatgaccatgccatggac
ccaacccaagcgttttgtcttgagtcttctggcgatgaaagagatggacaacctagtaga
ggagggtctttccagctcggattgtctgacagcagccacctgcagtgtcaggctgcagct
ctggccatggagagcacccaagagtttgtctctgtgggtggaggtgtgaatatggaagat
acccaagcttatgcagccacctcaacttcagacagaacatcattggagaatgatccaaac
ctggaggccacccaggcctacggaggggatgaggagcctgccagaagtccagtgacattt
gagaaggaaggtcagctagatttggctctacaaccaacacaggcatacatttgtgggccc
tgccatgattcagaggacgaaacggaggaagatgatagaaaaaaccttactactgctgag
actctacctttagactttcccacctcatctactcttgccatggctgaaacccaaccagtg
tgtgcctatagggaagaggagagtttggcaacagtgagtcacatttcctctaaaacagaa
gttatggtggtacaccggatggcagctcaacctgaggagatgcctgtgagtggagctttg
tctatagctgaaactcagcccatatgtacaagtgaagatgaggactcgattccaggtcca
cgaaaaagaaaagcaaagcagcttgaagaagaaacgcagcccatcactagtttggactat
tctgctgttgaaacccagccaatgcatgtaggtgcagatgaaactcattccgtagctaca
agtggaaatgaggaaagtgatgatgaggactcgattccaggtccacagaaaagaaaagcg
aaacaactgcgacttgaagaagaagagacgcagatgcttgtaaattctgagcgctctgct
gctgaaactcagcccatagatacatgtgatgataaggaaagtgatgatgtggactcgatt
ccaggtccacgaaaaaaaagaaaaccaaagcagcttgaagaagagacgcagcccatcact
agttctgactattctgctgttgaaacccagccaatgcatgtaggtgcagatgaaactcat
tccgtagctacaagtggaaatgaggaaagtgacgatgaggactcgattccaggtccacga
aaaaaaagaaaagcacagcagcttgaggacgagacgcagcccctcactagccctgactat
tctgctgttgaaactcagcccatagatacatgtgaagataaggaaagtgacgatgaagac
ttgattcaaagttcacggaaaagaaacgcaaagcaactgaaccttgaagaagaagcgacg
caggcactcttaaattctgagctctctgctgctgaaactcagcccatggatacatgtgaa
gatgaggaaagtgatgatgaggactcgattccaggtcctcgaaaaaaaagaaaagcaaag
ccgctgcagctggaagatgagcagacacagtccctcaccgggtctgttgttcctgccgat
ggaaccgaagccatgctcacaggtgaagatgtggaaagtgaagagtctattgtaggtcaa
cgaaaaagaaaggcaaagccactgcagcttgaggaagaagagacccagtcgctcacaatt
tcggaggcatctacagttgaatctaagccagtgagaacaaatactgacacacaaactcag
agaggaaaggggggaccatctgaagctggaaccagttgcatcagcgttacaagtagaaga
ggaacaagggcaagattaagagaagaggagaagcaggcagaaagttctgaacctcccagg
agacagacaagagggaataaagcttttctaagtactagaggaaggatgcaaaaatccagg
cctgatgagagcgaggaaaaggagaaggtagggcagcctaagaggactagagggaaaaca
tcgttgaggcaacagagagatgatgggaaagaagaagaaaagcttgatattgaaagaaat
gagcagcagcaacaacaagaagggatgttgggagaggagaaagatgttgcagagcccaga
caacaagtgagagaacaaacagaggaggaaaggaggaagatcaatgaggaaacagagaga
caacagtgggaagaacagcaaagaacagaaaggacaaggcaagaaaaggaagaacaagaa
cgattacaagctgaaaaagcagagaggttaagacttgaacaggagagagcagaaaatgag
agaatagatcgggaaagactagaagaagaagaaagggaaagagctgctaggatacagagg
gaaaaagaacaattagaaagaaaagagaagagtgaaaaagagagattagagcgggaaaaa
gcagagagagaagaaaaggatcgattagagaaagaagagaatgagagaatacaaagtgaa
agaaaggaacaagaggaaaatgaaagattagaaacagcaaagagggcagcagaagagcaa
gaaagacttgagagggagaggaaagaacgagaacaccaagcaaggctggagacagaagaa
aaggaaagagaagaaagagaaaaactggaaaaagaaaaacaagaaaaggaagcagaagaa
aaacaaagaaaggagctacaagaaatcaaggaagaagtgaaaacacccagcgatgatgct
ccagcaaggaggaccagatctcgctccaactcttccaactctgtcagctctgagaggtcc
gctctaagtgtcaacacccaggggagtacagggagaggccgaggccgaggtagaggagca
aagaggaccagcgagccagtacaggcccccctcccaagaggcaacaacaggaggaggaca
gtggctgcagagccatctggccagggacaaacagaacaggacagcaatgatgtttctcct
caaggaatcctttcaaggtccaactcctccaactccctcaactctgagatttccatcagc
actcccagctctcagaacagaggaagaagaagcaggcagcgaggaagagggaggaaaaca
gagactgagcccactcctcttgtaagttgtcagagtgatcagagttcagctcccaaaccc
acagccagaggcaggaagagcaggaaagcagaggtgacctccaatgaggtttctcatgat
ggtgataaagagaaggcagagtctcagcagcctagtaccactagggggcagagacgagct
aatgtcaatgagcctgaacctacagctgcagataaggaaggccagacaagtcatgaggaa
ggatgtgccaatgaacactcacttctggctaaaaggactgtcacgggaagaagccaaaaa
gcagtaaaaggtgaaagtgtagagataccagccgaggcagcagggggagatgcaaaagag
gctaccacacaagctacaagaagaggcagagcatccagtgttcgggggagtaagaacgcc
ccccctgaagcgaaggtgaaagatgagagtgagaaaatggaggaggagatggttgagagg
agaggcagaggccggacatcagtggtccaaaaaaagaagaaagaggtgcaggaaaaaagt
gtcaattccactaaccaggatgcaaatatgacatcagagcctcagactccaaccagccgg
aaaagacaggcccctgtggactcctctcctatggcaaagacccctcgctcttcctcatct
tccccggcagctggaggtcgactacgagctgccagccagacctacaaggtgctgttcact
ggggtcgtggatgaagcaggggagagagtgctagctcgtttaggaggctgcatggctaaa
ggcgtggcggacatgaactgtctggtcactgataaggtgcgcaggactgtcaagttcctg
tgtgcagtggctaaaggagtccccattgtcaccacacactggctggaaaagagtggtaaa
gctgggagcttcctgtctcccagtgctttcgttgtgaatgatccagagcaggaaaagaag
ttcaatttctgcctgcaggaatctctgagggttgccagcagtcagccactcttacaggga
tatgagatccacgttacaaagtcagtgaagccagagccagttcatatgaaagacatcatt
tcatgcagcggagccacatttcttcccaagatgccttctacacacaagccccagactgta
gtgatttcctgtgaggacgactggttgctgtgcggcccggctgtcttagcgtctctccca
gtcgtcactgtggagttcattctcacagggatcctccagcagatacttgactttcagacc
cataagctctctggccctatagctaacctgcaacctgccagaggcagagggaggggcagg
aagaagacatag

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