Scomber scombrus (Atlantic mackerel): 133982901
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Entry
133982901 CDS
T10651
Symbol
cnot3a
Name
(RefSeq) CCR4-NOT transcription complex subunit 3a isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133982901 (cnot3a)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
133982901 (cnot3a)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133982901
NCBI-ProteinID:
XP_062277748
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Position
7:18848548..18857215
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AA seq
912 aa
AA seq
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MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQRE
KEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQERIEELKRLIERHRFH
IRMLETILRMLDNDSVPVDSIQKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDIPAALV
ATSPSGQGNVEDEMYLHSSSTPTSTTSSSPIPPSPATCTAENSEDDKKRGRSTDSEVSQS
PVKNGTPSLLSSFSSSTTSGSSSSSSLVSMASVVGGIPVVPPSSSLIGSFSSAVQQHQHQ
PAQQQQQPQPPNQPQQPQQQPPQTKPSAPSNNTPSPPSNTLLPASTAPPLPTPSIPISSA
PNSQSQPTSGPTPTSSLGLGLGLGLSKVGMTGTSSANQMSGLGLGGHHSPLNTMAGLISG
STPAPYAQAAASGGLGLSSTTQSSISVESSTSIPTSGSSGVTTNGAGTGLGLLGSSPAHS
SLSGSIMGLVPGQNVSPVASQVPPSSVSATPGVIGMMGGNGGNVGVVGGVGVNAAPARPP
SGLKQNGSTSYSAVVAESSTESALSTPSQSQSSQPSSLSSSTSQPMDNGPSLISSITLPP
SSPSPSFSDSTPGGGSLLNGPHSYTQASEGLKAPEPLSSLKAMAERAALGSGLDGEIPNL
HLRDRGRNDIFSSSVAPGTPAAPQPSVSEVSIPPSLGVCPLGPTPLPKDQLYQQAMQESA
WTHMPHPSDSERIRQYLMRNPCPTLPFHHQIPPHHSDSIEFYQRLSTETLFFIFYYLEGT
KAQYLSAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFT
FEYRYLEDRDLQ
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagaaaacttcaaggcgagatcgacagatgtttgaaaaaagtagctgaa
ggtgtagaacagtttgaagatatctggcaaaagctccacaatgcagccaatgcaaaccag
aaggaaaagtatgaggctgacctcaagaaagagattaaaaaattacagcgattgagagat
cagataaaaacatgggtggcctcaaacgagatcaaagacaaaaggcagctagtagagaat
cgcaaacttatcgagacgcaaatggagcgattcaaagttgtggagcgtgaaacaaaaaca
aaagcgtactctaaagaaggcttggggctcgctcagaaggttgatccagctcagagggaa
aaggaggaaacgggacagtggctaacaaatacgatagacactctaaatatgcaggtggat
caatttgaaagtgaggtggaatctctttcagttcagacacgaaagaagaagggtgataaa
gatcagaagcaagaacgtatcgaggagctcaagcggttgatcgagaggcatagattccac
atccgcatgttggagaccattttacgaatgctggacaatgactctgtaccggtggattca
attcagaagatcaaggatgacgttgagtattacattgattcctcccaagaccctgacttc
gaggagaacgagttcctgtatgacgacttagacctggaagacatccccgcagcattagtt
gcgacgtctccgtcaggtcagggcaacgtggaagatgaaatgtatctccactccagcagc
actcccacttccaccacctcttcttcacccattcctccatccccggccacttgcactgct
gagaactcagaggacgataagaaaaggggacgctcgacagacagtgaagttagtcagtca
cctgtgaagaacggcaccccttccttgctgtcttccttctcttcctccacaacctctggc
tcctcctcatcctcgtccctcgtgtccatggcaagtgtggtagggggcatccccgtggtt
ccaccaagcagcagtcttataggaagcttcagcagtgcggtgcagcaacatcagcatcaa
cctgcacaacagcagcaacaacctcagccaccaaaccaaccgcagcagccacaacagcaa
ccacctcagacaaaaccctctgccccctcaaacaacacccccagcccgcccagcaacacg
cttctcccagcctccaccgctccccctctccctacgcccagcatacccatttcatcggct
cccaactctcagtctcagcccacatctgggccaacccctacatccagtttgggacttggg
ttgggactgggtttgagcaaagttggcatgacagggaccagcagtgccaaccaaatgtct
ggtttaggcctgggtggccaccactctcctctaaacacaatggcagggctcatttcgggg
tccacacctgccccttacgctcaggcagcagcatcaggaggcttgggtttgagcagcacc
acccagtccagcatttcagtggagagtagcacttccatccccacctctggctccagtgga
gtcacaaccaacggggcggggactgggctcggattgctaggttccagcccggctcacagt
tctctgagcgggagtatcatgggtctggttccagggcaaaatgtttcccccgtcgcttct
caggtgccccctagttctgtcagcgctaccccaggagttattggcatgatgggaggcaac
ggagggaacgtcggagtagttggaggagtaggggtgaacgctgctcctgctagaccgccg
agtggattgaagcaaaatggaagcacaagttacagtgccgtagtggcagagagttccaca
gaatcagctctaagcacaccgagccagtcacaaagcagccaaccttcatctctcagttct
tcaaccagtcagccgatggacaatggtcccagtttaatcagctccatcaccctgcctccc
agctctccgtccccctcgttctcagacagcacacccggaggagggagtcttcttaacggc
ccccactcctacacgcaggcctctgagggcctcaaggctcctgagcctctcagttcactg
aaggcgatggctgagagggcagcgctgggatcaggcctggacggagagattcccaacctg
cacctaagagacagaggtcggaacgacatcttctcgtcatctgtagcgcccggcacaccc
gccgcccctcagccgtccgtgtcggaagtcagcatcccaccctcgctcggggtctgtcca
ctgggcccaacccccctccccaaagaccagctctaccagcaggccatgcaggagtccgcg
tggacacatatgccacacccctctgactctgagaggataaggcaatacctgatgaggaat
ccgtgtcccaccttgcccttccatcatcagataccgccacaccactctgattccatagag
ttctaccagagactgtctacagaaactctatttttcatcttctactacctggagggcacc
aaggctcagtatctgtctgccaaggctctcaaaaagcagtcatggaggtttcacaccaag
tacatgatgtggttccagaggcacgaggagcccaagactatcactgacgagtttgaacag
ggcacttacatttactttgattatgagaaatggggccagcggaaaaaggaggggttcacc
ttcgagtacaggtacctcgaagacagagacctgcagtga
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