Scomber scombrus (Atlantic mackerel): 133982911
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Entry
133982911 CDS
T10651
Symbol
pou2f2b
Name
(RefSeq) POU class 2 homeobox 2a
KO
K09364
POU domain transcription factor, class 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133982911 (pou2f2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133982911 (pou2f2b)
03021 Transcription machinery [BR:
ssco03021
]
133982911 (pou2f2b)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
133982911 (pou2f2b)
Transcription machinery [BR:
ssco03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
133982911 (pou2f2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
C2orf69
DDHD
Motif
Other DBs
NCBI-GeneID:
133982911
NCBI-ProteinID:
XP_062277763
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All DBs
Position
7:20472765..20510744
Genome browser
AA seq
717 aa
AA seq
DB search
MFVPLPVPFVFQRTAPDLNNAWRLKSPLALRSSSDIRMSKPVEIEKLGADSPLDSTDSER
NGPESNHQAQSMKVNPFPLSPTLSKTKMEECEMSPALPHSHGPTPSQTALQHTQLMLTGS
QLAGLTALLPAQQQLLLQQAQAQLLAAAVQQSSAAHAAHAAHAAAQANQQAQAAAAAANQ
QAQQQQQQQQQQQQAGQTGQQAQTQSQGQSTQEPTAQSVPIPPPPPQLTLSQPIQLTAQD
IQQLLQLQQLVLVPGHSLPSPAQFLLPQAQQGQQGLLSTPNLISLPQQNQGSLLSAPTRM
GLQAQRDKSVEVSMGGGVTTVPSVTSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGL
AMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSIDSTLPSPSSLSSP
SMGFDGIPGRRRKKRTSIETNVRVALERAFLSNQKPTSEEILMIAEQLNMEKEVIRVWFC
NRRQKEKRINPSSATPPLPSQPQTAQPTHKPPCYSPHMMSSQLSQAVTSLSTTVTTMSPV
CPLTSSLTSTHPSLSSAPSPVTPPPRSTASPATPSHSTLNLNTGNTVMGVNTGMNQALLC
NNPLATIQALAASGGQLPLSSLEGGSKVMLGASGGQGGGLASSLFLNHPAFLHMGQKPSA
GLVSAAIAKASQASPFPSASSISPTPCTPSPCSSPASSCSSSEMAHSPTSLGGAKIE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcccttgccggtgccgttcgtgtttcagagaactgcccctgacctcaacaac
gcctggcgtctcaagtcccctctggctctccgctccagctccgatatcaggatgtcaaag
ccagtagagattgagaaattaggggctgactcaccgttggacagcacagattcagagcgg
aatggacctgaatcaaatcaccaggctcagtcaatgaaagtcaatccctttcccctttca
ccaaccctgagcaagactaagatggaggagtgtgagatgtccccggcccttcctcactct
cacggcccgaccccttcacagacggccctgcaacatacccagctcatgctgaccggctcc
caactagcagggctgaccgctctgttgccagcacagcagcagttgttgttgcagcaggct
caggcacagctcctggctgcagctgtgcagcaatccagtgcagcccacgccgctcacgct
gcccacgcagccgcccaagccaatcagcaagctcaggcagccgccgccgcagcaaatcag
caagcccagcagcagcagcagcagcagcagcagcagcagcaggcgggacaaacaggccaa
caggcccagacgcagtcccagggacagagcacacaggaaccgactgcccaaagtgtccct
atcccacctcctccaccccagctcaccctctcccagccaatccagctcaccgcccaggac
atccagcagctgctgcagcttcagcagttggtgttggtgcccggccactcgctcccgtct
cctgcccagttcctcctcccacaggcacagcagggccagcaaggactcctatcgacacca
aatcttatttcgctacctcagcaaaaccaagggagcctgctgtctgctccaactagaatg
gggctccaagcacagcgagataaaagtgtggaggtgagcatgggtggaggtgtgactaca
gtgccgtctgtgacctctcaccccgaagaacccagtgacctggaagaactagaacagttt
gcccgcactttcaaacagagacgcatcaaactgggcttcacacagggagatgtcggcttg
gccatggggaagctgtacggcaatgatttcagccaaaccaccatctcccgctttgaggcc
cttaacctgagctttaagaatatgtgcaagctgaagccactgctggagaagtggcttaat
gatgcagagaccatgtctatagacagtaccctccccagccccagctcgctgtcctctccc
tctatgggctttgacgggattcctggtcgccgcagaaagaagagaaccagcattgagacg
aatgtacgcgtggccctggaacgcgctttcttgtcgaaccagaagcctacctcagaagag
atcctgatgatcgccgagcagctcaacatggagaaagaggtgatccgggtctggttctgc
aaccgccggcagaaagagaaacgcatcaatccatccagtgccacccctcccctacccagc
cagccccagactgcccaaccaacgcacaaacccccctgctacagtcctcacatgatgtcc
agccagctgtcgcaggccgtgaccagtctcagcacaacagtgaccaccatgtcccccgtc
tgccccctgacctccagcctcacctccacccacccttccctcagctctgcaccctcccca
gtgactcctcctccccgcagcacggccagcccagccactcccagccacagcacactcaac
cttaacacagggaacactgtgatgggggtaaacacagggatgaaccaagccctcctctgt
aacaatcccctggccactatccaagccctagcagccagtggtggccagctgcctctttcc
agtcttgaggggggcagtaaggtgatgctgggggcctctgggggccagggaggggggctc
gcctcctccctcttcctcaaccaccccgccttcctccacatgggccagaaacccagcgct
ggactggtcagcgctgccatagccaaagcctcccaggcctcccccttcccctctgccagc
agcatcagccccaccccctgcaccccctccccttgctcaagccccgcctcttcctgctcc
tccagcgaaatggcacacagcccaacctctctgggcggggccaagatcgagtga
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