Scomber scombrus (Atlantic mackerel): 133983000
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Entry
133983000 CDS
T10651
Symbol
ncapd2
Name
(RefSeq) condensin complex subunit 1
KO
K06677
condensin complex subunit 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133983000 (ncapd2)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
133983000 (ncapd2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
Cnd1_N
HEAT
Adaptin_N
HEAT_2
Cnd3
PDS5
SCD
Motif
Other DBs
NCBI-GeneID:
133983000
NCBI-ProteinID:
XP_062277891
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All DBs
Position
7:19692831..19715152
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AA seq
1405 aa
AA seq
DB search
MSWDFFVPVYVGDLVKTGGINQYLVQDVVSPKQLPTYISRFKAALRSQGPLCILEHFDTG
YSVLQHCNSVELSVKEDTLELLLQVVSSLAATLPALLISTSVSAAERKEKLNAVKMSVFL
LCKITETLESESYRQSIVTAPGKGGKKGKAGGEGLLQWDSEREKVLQALVQLLQLDIRAL
WNLSLVEEEFISCVTCCCYKLLENPTIGHVKSKLTRDSIIHLLGVLIKKYNHLLGASVKV
IQLLQHFEQLSSVFAQAVFVWSTEYGIRAIIGEVIREIGQRSSDELAREGSGVKAFSSFI
TELGALVPELIIPNISVLITHLEGESHAMRVAVCEVLGEILVRVLCGDGLDESGKADRDR
FFDTLQEHLHDTHSHVRARVLQIYTRIVNSKALPLCRYSEVMGLTVGRLMDKSINVVKSA
IQLLAAFIAHNPYSCKLSSADLKKPLEKETAKLREMKEKLAGKAPEAVIKASELWAAMEP
ELLVTVNTVLEPTSETEREEEEDDDRDVEEEKEAEDDRATAVKIAQYLRVNKYRNAVRLC
IKAHSCFPESEMFAALSTLTSEILMNTLALLFKGSDEDTSELSQNLPPTPQKEGEKEEEE
EDGELKKQEMLVQYLRDTESFALQVERAISVINTMLYWKTTSVVQEAVQFCVTVCEFSVA
NSVSGVRKMLPLVWSTDAAIKDAVVQAYKRLYLNPQGDTTRMKAQTLVDSLSELMVDASL
GTIQCLEEIVQEFFGSDSNLQSTVVQVLWERFTGKKETSGLHRRAAVLLLGMAARAEREV
VLSNLDTLCSVALGEKVTEDFLLARDAVFTICSITDHVRQSKGTPFRLPQDHQLFTRLTQ
AIAEGVVMEDPYWQSFMEQAVRLIYFLAESPDQLCSRLLQRSARLLLDQVAEGGEINKNA
GQMQDESQDPSEQGEQVNSVCLAQLLALCGCVAFWQVSHLERSVSAELRRRRGETEEREE
KEKGPSSKAKQATNESAMEEELGLIGASAEDTEAEIIRKICETELLAEENLLCAFLPLLV
RVCSSPGRYSHPQLTTAACLALSQYMMISPSVCEENVRLMFTVLERSALPVVRANAIIAL
GDLTVRFPNILEPWTQNLYARLSDEVPSVRQTAVTVLTQLVLKDVLKVKGQVSEVAVLLI
DPETHIASLSLNFFNELATKDNAIYNLLPDIISRLSDPERGMSPEDFNTIMKQLFSYITK
ERQTESLVEKLCQRFRTAKTERQWCDLAMSLSLLSMCERGFKRLQECWECYSDKLTEPGV
YQPLLSITARLRRGAKTQFKAQVDEFEKRLTAVHTRGLENVESPEMDEENQTEGGSSQKT
VVRTPLPPRGRPRTKRGQSKPSASSHGDASFVTPQKSRKSKKPVITFSSDEEEEEDEEDA
VMAESETPKVTTPIARTSRRARLRN
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggacttttttgtgcccgtgtacgtgggggacctggtgaagactgggggaatc
aaccagtacctcgtgcaagatgtagtttccccaaaacagctgccgacctatatcagtaga
ttcaaggcagcattgagaagccaaggacctttgtgcatcttggagcactttgacacaggc
tacagtgtgctgcagcattgcaactcagtggagctgagtgtgaaagaagatactctggaa
ttactgttgcaagttgttagcagtctggctgctaccctgccggcgctcctcatctccacc
tctgtctcagcagcagaacgtaaagagaaactcaatgcagttaaaatgagtgtcttcctg
ctctgcaaaatcacagagacccttgaaagtgaatcctatcgacagagtattgtcaccgca
cctgggaagggtggtaaaaaaggcaaagctggcggagaaggactcctgcagtgggactct
gagagagagaaggtgctgcaggcccttgtccagctcctccagctggatatccgtgctctc
tggaacctgtccctggtggaggaagagtttatcagctgtgtgacctgctgctgctacaaa
ctactcgagaacccaaccattggccacgtcaagagcaaactcaccagagattctataatc
cacctactgggggtgctgatcaagaagtacaatcacctcttgggtgcaagtgtaaaggtg
atccagctgctgcaacactttgagcagctgtcatctgtgtttgcccaggctgtgtttgtg
tggagcacagaatatggaatcagggctatcataggagaagtaataagggagattggtcag
agatcaagcgacgagcttgctagagaagggtcaggggtcaaagcattttcttccttcatc
acagaactcggtgccttggtgcctgaactaatcatccccaacattagtgtgctcatcaca
cacctggaaggagagagccacgcaatgcgtgtcgctgtgtgtgaggtgttgggagagatc
cttgtgcgtgtcctgtgtggtgacgggctcgatgagtctggtaaagccgaccgtgaccgc
ttctttgacacactgcaggagcatctgcatgacacacactctcacgtcagggcacgtgtg
ttgcagatctacacacgcatcgtcaacagcaaagctttgcctctgtgtaggtacagtgag
gtgatggggctcactgtgggacgactgatggacaaatctataaatgtggtgaagagcgcc
atccagctgttggcagccttcattgcacacaacccctacagctgcaagttgagcagtgca
gacctgaagaaaccacttgagaaagagactgctaaactcagagagatgaaggagaaacta
gcaggaaaagcaccagaggcagtgatcaaagcatctgagctgtgggccgccatggagccc
gagctgctcgtcactgtcaatacagtgctggagcccacaagtgaaacagagagggaggag
gaggaggacgacgacagggatgtggaggaagaaaaggaggcagaagatgacagagcaacc
gcagtgaagattgctcagtacctccgtgtcaacaaatacaggaatgctgtgcgtctctgt
ataaaagcccacagctgcttccctgagtctgagatgttcgctgctctgtccactcttacc
tccgagattttaatgaacacactggccctgcttttcaaaggttctgacgaggacacatct
gagctcagccagaacttgccccccaccccacagaaagaaggggagaaagaggaggaggag
gaggatggtgagctgaagaagcaggagatgttggtgcagtacctgagagacacagaatcc
ttcgccttacaagtggagagagcaatctctgtcatcaacaccatgctctactggaaaacc
acttcagtggtccaggaggccgtgcagttttgtgtgacagtatgtgagttcagtgttgcc
aactctgtcagcggagtgaggaagatgttgcctctggtctggtcaactgatgccgccatt
aaagatgcagttgttcaggcctacaagcgcctctatctgaaccctcagggggacacgacc
aggatgaaagcccagactctcgtggacagtctctccgagctgatggttgatgcgtctctg
ggaacaattcaatgtcttgaggaaatagtgcaggagttttttggcagtgacagcaatctc
cagtccaccgtcgtgcaggttttgtgggagaggtttactggcaaaaaagaaacctctgga
ctacacaggcgagctgcggtgctattgctgggcatggctgcacgggcagagagggaggtg
gtcctcagtaatctggacactctttgttctgtggctctgggagaaaaagtgactgaagac
ttccttctggccagagacgctgttttcaccatctgcagcatcactgaccatgtcaggcaa
tcaaaaggcactccattcagactgccccaggaccaccagctctttacccgcctcacacag
gccatcgctgaaggtgtggtgatggaggacccttattggcagagcttcatggaacaggct
gtccgtctaatctacttcctggctgaatcccctgaccagctgtgctcacggctgctccag
cgcagcgctcgcctcttactagatcaggttgcagaaggtggggaaatcaacaagaacgca
ggccagatgcaagacgaatctcaagatcccagtgagcaaggtgaacaagtgaacagtgtg
tgtctggcccagctgttggctctgtgtggctgtgtggctttctggcaggtatctcacctt
gagcgcagtgtgagtgctgagctgcggaggaggagaggagagacggaagagagggaagag
aaggaaaagggcccatccagcaaagctaagcaagcaactaatgagagtgcgatggaggag
gagcttggtttgatcggtgcctctgccgaagatacagaggctgaaatcatcagaaagatc
tgtgagactgaattactggctgaggagaacctgctgtgtgcattccttcctctgctggtt
agagtctgcagctccccaggacgctattcccacccacagctcaccactgctgcctgtctg
gcactctctcagtatatgatgataagcccgtcagtgtgtgaggagaatgttcgtctaatg
tttacggtactggagcgctctgctctccctgttgtcagggccaatgccatcattgccctc
ggagacctcaccgtccgtttcccaaatattttggagccctggacacagaatctctatgcc
aggctcagtgacgaggtgccttcagtgaggcagacagctgtgacagttcttactcagttg
gtgcttaaggatgtgctcaaggtcaaaggtcaagtcagtgaggtggctgtgctgctaatt
gaccctgagactcacatagccagcctctccctgaacttcttcaatgagctggccaccaag
gacaatgcaatctacaacctgctccctgacatcatcagtcgactgtccgacccggagaga
ggcatgagccctgaggacttcaataccatcatgaaacagttgttctcctacatcaccaaa
gaaaggcagaccgagtctctggtagagaaactgtgtcagcgctttaggactgccaagacg
gagcgtcagtggtgtgacttggccatgtctctgtctctgctgtccatgtgtgagcgtggt
tttaagaggttgcaggagtgctgggagtgttacagtgacaagttgactgagcctggagtc
taccagcctctgctctccatcactgccaggcttcgccgtggggccaaaacgcagtttaag
gcccaagtggatgagtttgaaaagcgtcttactgcggttcacacacgggggctggaaaat
gtagaaagccctgagatggacgaggagaaccaaacagaaggaggctcaagtcaaaagaca
gtcgtgcgcacacctctgccccccagaggccggcccaggacaaagagaggtcaatcaaaa
ccctctgcttccagccatggtgatgccagttttgtgacacctcaaaagtctcgcaaatct
aagaaacctgtgattactttcagcagtgatgaggaggaggaggaggatgaagaggatgcg
gtgatggcggagagtgagactcctaaagtgacaacgccgattgctcgcacatcccgacga
gctcgcctcagaaactga
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