Scomber scombrus (Atlantic mackerel): 133983004
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Entry
133983004 CDS
T10651
Symbol
tubb5
Name
(RefSeq) tubulin beta-5 chain
KO
K07375
tubulin beta
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04145
Phagosome
ssco04540
Gap junction
ssco04814
Motor proteins
ssco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133983004 (tubb5)
09144 Cellular community - eukaryotes
04540 Gap junction
133983004 (tubb5)
09142 Cell motility
04814 Motor proteins
133983004 (tubb5)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133983004 (tubb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133983004 (tubb5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133983004 (tubb5)
04147 Exosome [BR:
ssco04147
]
133983004 (tubb5)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
133983004 (tubb5)
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
133983004 (tubb5)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133983004 (tubb5)
Exosomal proteins of colorectal cancer cells
133983004 (tubb5)
Exosomal proteins of bladder cancer cells
133983004 (tubb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_2
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
133983004
NCBI-ProteinID:
XP_062277896
LinkDB
All DBs
Position
7:20230398..20234985
Genome browser
AA seq
444 aa
AA seq
DB search
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEAEDDA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagggagattgtgcacatccaggccggccagtgcggtaaccagattggtgccaagttc
tgggaagttatcagcgatgagcacggcattgatcctacagggacttaccacggagacagt
gacctgcagctggacaggatcagtgtttactacaatgaggcaacaggaggcaaatatgtg
ccccgcgccattctggtggacttggagcctggcaccatggactctgtgaggtccggaccc
ttcgggcagatcttcaggcctgacaactttgtatttggtcagagcggtgctggaaacaac
tgggctaagggtcactacacagagggtgctgagttggtagactcagtcctggatgtggtc
cgtaaagagtcagagagctgtgactgcctacagggcttccagctcacccattctcttggt
ggtggaactggatctggtatgggaacactgctcatcagcaaaatccgtgaagagtaccct
gaccgaatcatgaataccttcagtgtggtgccttcccccaaggtgtcagacacagtggtt
gagccttacaatgccactctatcagtccaccagcttgtggagaacacagatgaaacctac
tgcattgacaatgaagctctgtatgacatctgcttccgtactctcaaactcaccacaccc
acctacggagaccttaaccacctggtgtctgccaccatgagcggagtcaccacctgcctg
cgcttcccagggcagctcaacgctgacctccgcaaactggctgtcaacatggtgcctttc
ccacgtttgcactttttcatgcccggctttgcccccctgaccagcaggggcagccagcaa
taccgtgccctcacagttcccgagctcacccagcaggtgttcgatgccaagaatatgatg
gctgcatgcgaccctcgtcacggccgctatctgaccgtcgctgctgtgttccgtgggcgc
atgtccatgaaggaggttgatgaacagatgctcaatgtccagaacaagaacagcagctat
ttcgtcgaatggatccccaacaatgtgaagacagccgtgtgtgacattccaccccgtggc
cttaagatggctgtcactttcattggcaacagcacagctatccaggagctgttcaagcgc
atctctgagcagttcacagccatgttccgtcgtaaagccttcttgcattggtacacaggt
gaaggtatggatgagatggagttcactgaagctgagagcaacatgaatgatctggtgtct
gaataccagcagtaccaggatgccactgctgaggaagagggtgaatttgaggaggaggca
gaagatgatgcttga
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