Scomber scombrus (Atlantic mackerel): 133983020
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Entry
133983020 CDS
T10651
Name
(RefSeq) lamin-A-like
KO
K12641
lamin A/C
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04210
Apoptosis
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
133983020
09142 Cell motility
04820 Cytoskeleton in muscle cells
133983020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133983020
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
133983020
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Filament
LTD
TPR_MLP1_2
M
Motif
Other DBs
NCBI-GeneID:
133983020
NCBI-ProteinID:
XP_062277918
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All DBs
Position
7:24790198..24827160
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AA seq
648 aa
AA seq
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METPSQKRTSRGIASVSPARITRLQEKEDLCNLNDRLAVYIDKVRSLESENAGLRLRITE
SESSVSRDLTGMRTAYETELADARKTLDQVAKERARMQLELGKIREDHKELKARNSKKES
DLEAALARLRDLEALLNSKDASLTTALGEKRALEAEVKDLKAQLAKVDGNLADAKRQLQD
EMLRRVDAENRLQTVKEELEFQKNIYNEELRESKRRHESRMVEIDSGRQLEFESKLAEAL
VELRAQHEEQVALYKTELEKTYNSKLENARHSADRNNHLVGAAHEELQQTRVRLEGMSSQ
LSQLQKQLSMSESKVRELEEMMSRERDLMRRRLDDKEREISEIRARMQQQLDEYQELLDI
KLALDMEINAYRKLLEGEEERLRLSPSPPPTKVTVTRTSGSAHSHTSRLLQSSTTASSSR
NSSGTASAKKRRLNDNDSETSSLVGGTVTKTRISQHASASGRVTVDEVDLEGKYIRLSNK
ADEDQSLANWQVKRQIGNGSPIAYKFPHKFSLKAGGTVTIWAASGGGSHNPPTDLVWKNQ
NSWGTGDLLQTILISANGEEMAMRKVTRTLFQDDDDDEMGAHSTSGGDNEYNLRSRTVIC
DSCGQPSDRSGGCGGGGGLPEGLVGHSSFMGTNEPRQGRVKPENCSVM
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccccaagccagaaacgcaccagccgaggtatcgcctccgtctcaccggcccgc
atcaccagactgcaggagaaggaggacctttgcaacctcaatgaccggctggctgtctac
atcgacaaggtgcgctccctggagtcggagaacgccgggttgcggctgcgcatcactgag
tcggagtcctcagtcagccgtgacctgacgggcatgaggacggcctacgagacagagctg
gccgacgctcgtaagaccctggaccaggtggccaaggagcgagcacgcatgcagctggag
ctgggaaagatcagggaggaccacaaggagctcaaagccaggaacagcaagaaggaatct
gacctggaggcggctctagccaggctcagagacctggaggccctgctcaactctaaagat
gcttctctcactactgcattgggggagaaacgagccctggaggctgaggtcaaggaccta
aaagcccagctggccaaggtggacggtaacttagccgatgccaagaggcagctgcaggat
gagatgctgaggagagtggatgccgagaaccgcctgcagacggtgaaagaggagcttgag
ttccagaagaacatctacaacgaggagctgcgtgagtccaagcgtcggcacgagtctcgc
atggtggagattgacagcgggcgacagctggaattcgagagcaagctggctgaggcccta
gtggagctgagagcccagcatgaggagcaggtcgccctgtacaagacagaactggagaag
acctacaactctaagttggagaacgcccgtcactcagctgacaggaacaaccacttggtt
ggcgccgcccatgaagagctgcagcagacccgtgttcgactggagggcatgtcaagccag
cttagccagctgcagaaacagttgtctatgagtgagtccaaggtacgggagcttgaggag
atgatgtcgagagagcgggacctgatgcggcggcggcttgatgataaagagcgggagata
tctgaaatccgagctcgcatgcagcagcagctggacgagtaccaggagctgctggacatc
aagctggccctggacatggagattaatgcttacaggaagctgctggagggagaagaggag
aggctgcgtctgtcacccagccctccgcccaccaaggtgacggtgacacgaacctccggc
tcagcccacagccacaccagccgcctccttcagtcctccaccaccgcctccagcagccgc
aactcctccggcacagccagcgccaagaagcgccgcctcaacgacaacgacagcgagacc
tccagccttgtggggggtaccgtgaccaagactcgcattagtcagcacgcctccgccagc
ggccgtgtcactgtggacgaggttgacctggagggcaagtacatccgccttagcaacaag
gctgatgaggaccaatcactggccaactggcaggtgaagagacaaatcgggaatggtagc
cccatcgcctacaagtttccacacaaattcagcctgaaggctggaggaaccgtcactatc
tgggctgcatctggtggtggaagccacaacccccccactgacctggtgtggaagaaccag
aactcctggggcaccggtgacctcctgcaaaccatcctcatcagtgccaacggagaggaa
atggccatgaggaaagtcacacgcacccttttccaggatgatgacgatgacgaaatggga
gctcacagcacgagcggcggagacaacgagtacaacctgcggagccgcacggtgatctgc
gactcctgcgggcagccgtcagaccgctcgggcggctgcggcggcggcggtggtctacct
gaaggcctcgtgggacactcctcattcatgggcaccaacgagcccagacagggtcgtgtc
aagccggagaactgctccgtcatgtaa
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