Scomber scombrus (Atlantic mackerel): 133983032
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Entry
133983032 CDS
T10651
Symbol
rab5ab
Name
(RefSeq) RAB5A, member RAS oncogene family, b
KO
K07887
Ras-related protein Rab-5A
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04137
Mitophagy - animal
ssco04144
Endocytosis
ssco04145
Phagosome
ssco04148
Efferocytosis
ssco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133983032 (rab5ab)
04145 Phagosome
133983032 (rab5ab)
04137 Mitophagy - animal
133983032 (rab5ab)
04148 Efferocytosis
133983032 (rab5ab)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133983032 (rab5ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133983032 (rab5ab)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133983032 (rab5ab)
04031 GTP-binding proteins [BR:
ssco04031
]
133983032 (rab5ab)
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
133983032 (rab5ab)
Endosome - Lysosome transport
133983032 (rab5ab)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133983032 (rab5ab)
Exosomal proteins of other body fluids (saliva and urine)
133983032 (rab5ab)
Exosomal proteins of colorectal cancer cells
133983032 (rab5ab)
Exosomal proteins of bladder cancer cells
133983032 (rab5ab)
GTP-binding proteins [BR:
ssco04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
133983032 (rab5ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
133983032
NCBI-ProteinID:
XP_062277934
LinkDB
All DBs
Position
7:22782089..22792046
Genome browser
AA seq
216 aa
AA seq
DB search
MASRGGATRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFVRAKNWVKELQ
RQASPNIVIALAGNKADLANKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
KLPKNEPQAAGASSGRNRGVDLTETAQPTSRPCCNN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtagaggcggagctacacgacccaatgggccaaacgcaggcaacaagatctgc
cagttcaaacttgtgcttttaggagagtcggcagtggggaagtcaagtctcgtacttcgt
ttcgtcaagggacagtttcacgaattccaagagagcacaatcggagctgccttcctgact
cagacagtatgtttggacgacacaacagtcaagtttgaaatctgggacacagctggtcag
gagcgctaccacagtctggctcccatgtactacagaggtgcccaggcagccattgtggtc
tatgatataacaaatgaggagtcatttgtacgggcgaagaactgggttaaagagcttcag
agacaagccagtccaaatattgtaatagctctggctgggaacaaggctgacctcgctaac
aagagagcattggacttccaggatgcacagtcgtacgcagatgacaacagcttgcttttt
atggaaacgtcagcaaagacctctatgaacgtcaacgagatattcatggccatcgcaaag
aagctacccaagaacgagcctcaagctgccggagcgagcagcgggcggaaccggggagtg
gacctgacagagacggcccagcccaccagccgtccctgctgcaataactaa
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